Cloning of bovine LYST gene and identification of a missense mutation associated with Chediak-Higashi syndrome of cattle
An inheritable bleeding disorder with light coat color caused by an autosomal recessive gene has been reported in a population of Japanese black cattle. The disease has been diagnosed as Chediak-Higashi Syndrome (CHS) of cattle which correspond to a human inheritable disorder caused by mutation in L...
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Veröffentlicht in: | Mammalian genome 1999-12, Vol.10 (12), p.1146-1149 |
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description | An inheritable bleeding disorder with light coat color caused by an autosomal recessive gene has been reported in a population of Japanese black cattle. The disease has been diagnosed as Chediak-Higashi Syndrome (CHS) of cattle which correspond to a human inheritable disorder caused by mutation in LYST gene. To characterize the molecular lesion causing CHS in cattle, cDNAs encoding bovine LYST were isolated from a bovine brain cDNA library. The nucleotide and deduced amino acid sequences of bovine LYST had 89.6 and 90.2% identity with those of the human LYST gene, respectively. In order to identify the mutation within the LYST gene causing CHS in cattle, cDNA fragments of the LYST gene were amplified from an affected animal by RT-PCR and their nucleotide sequences were completely determined. Notably, a nucleotide substitution of A to G transition, resulting in an amino acid substitution of histidine to arginine (H2015R) was identified in the affected animal. The presence of the substitution was completely corresponding with the occurrence of the CHS phenotype among 105 members of pedigrees of the Japanese black cattle and no cattle of other populations had this substitution. These findings strongly suggested that H2015R is the causative mutation in CHS of Japanese black cattle. |
doi_str_mv | 10.1007/s003359901181 |
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The disease has been diagnosed as Chediak-Higashi Syndrome (CHS) of cattle which correspond to a human inheritable disorder caused by mutation in LYST gene. To characterize the molecular lesion causing CHS in cattle, cDNAs encoding bovine LYST were isolated from a bovine brain cDNA library. The nucleotide and deduced amino acid sequences of bovine LYST had 89.6 and 90.2% identity with those of the human LYST gene, respectively. In order to identify the mutation within the LYST gene causing CHS in cattle, cDNA fragments of the LYST gene were amplified from an affected animal by RT-PCR and their nucleotide sequences were completely determined. Notably, a nucleotide substitution of A to G transition, resulting in an amino acid substitution of histidine to arginine (H2015R) was identified in the affected animal. The presence of the substitution was completely corresponding with the occurrence of the CHS phenotype among 105 members of pedigrees of the Japanese black cattle and no cattle of other populations had this substitution. These findings strongly suggested that H2015R is the causative mutation in CHS of Japanese black cattle.</description><identifier>ISSN: 0938-8990</identifier><identifier>EISSN: 1432-1777</identifier><identifier>DOI: 10.1007/s003359901181</identifier><identifier>PMID: 10594238</identifier><language>eng</language><publisher>United States: Springer-Verlag</publisher><subject>Amino Acid Sequence ; amino acid sequences ; amino acid substitution ; Amino Acid Substitution - genetics ; Animals ; arginine ; Base Sequence ; brain ; Cattle ; Cattle Diseases - genetics ; cDNA libraries ; Chediak-Higashi syndrome ; Chediak-Higashi Syndrome - genetics ; Chediak-Higashi Syndrome - veterinary ; Cloning, Molecular ; color ; complementary DNA ; DNA, Complementary - genetics ; Genes, Recessive - genetics ; Genetics ; Genotype ; Hair Color - genetics ; hemorrhage ; histidine ; Humans ; Liver - metabolism ; LYST gene ; missense mutation ; Molecular Sequence Data ; Mutation ; Mutation, Missense - genetics ; nucleotide sequences ; pedigree ; Phenotype ; Polymorphism, Restriction Fragment Length ; Proteins - chemistry ; Proteins - genetics ; recessive genes ; reverse transcriptase polymerase chain reaction ; Sequence Homology, Amino Acid ; Vesicular Transport Proteins ; Wagyu</subject><ispartof>Mammalian genome, 1999-12, Vol.10 (12), p.1146-1149</ispartof><rights>Springer-Verlag New York Inc. 1999</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c372t-6d8bf3d9240ea410de216294a69f4ccdbce8013b3df1a4efae3ad7801717f11c3</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/10594238$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kunieda, Tetsuo</creatorcontrib><creatorcontrib>Nakagiri, Michiko</creatorcontrib><creatorcontrib>Takami, Marika</creatorcontrib><creatorcontrib>Ide, Hanako</creatorcontrib><creatorcontrib>Ogawa, Hiroyuki</creatorcontrib><title>Cloning of bovine LYST gene and identification of a missense mutation associated with Chediak-Higashi syndrome of cattle</title><title>Mammalian genome</title><addtitle>Mamm Genome</addtitle><description>An inheritable bleeding disorder with light coat color caused by an autosomal recessive gene has been reported in a population of Japanese black cattle. The disease has been diagnosed as Chediak-Higashi Syndrome (CHS) of cattle which correspond to a human inheritable disorder caused by mutation in LYST gene. To characterize the molecular lesion causing CHS in cattle, cDNAs encoding bovine LYST were isolated from a bovine brain cDNA library. The nucleotide and deduced amino acid sequences of bovine LYST had 89.6 and 90.2% identity with those of the human LYST gene, respectively. In order to identify the mutation within the LYST gene causing CHS in cattle, cDNA fragments of the LYST gene were amplified from an affected animal by RT-PCR and their nucleotide sequences were completely determined. Notably, a nucleotide substitution of A to G transition, resulting in an amino acid substitution of histidine to arginine (H2015R) was identified in the affected animal. The presence of the substitution was completely corresponding with the occurrence of the CHS phenotype among 105 members of pedigrees of the Japanese black cattle and no cattle of other populations had this substitution. These findings strongly suggested that H2015R is the causative mutation in CHS of Japanese black cattle.</description><subject>Amino Acid Sequence</subject><subject>amino acid sequences</subject><subject>amino acid substitution</subject><subject>Amino Acid Substitution - genetics</subject><subject>Animals</subject><subject>arginine</subject><subject>Base Sequence</subject><subject>brain</subject><subject>Cattle</subject><subject>Cattle Diseases - genetics</subject><subject>cDNA libraries</subject><subject>Chediak-Higashi syndrome</subject><subject>Chediak-Higashi Syndrome - genetics</subject><subject>Chediak-Higashi Syndrome - veterinary</subject><subject>Cloning, Molecular</subject><subject>color</subject><subject>complementary DNA</subject><subject>DNA, Complementary - genetics</subject><subject>Genes, Recessive - genetics</subject><subject>Genetics</subject><subject>Genotype</subject><subject>Hair Color - genetics</subject><subject>hemorrhage</subject><subject>histidine</subject><subject>Humans</subject><subject>Liver - metabolism</subject><subject>LYST gene</subject><subject>missense mutation</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Mutation, Missense - genetics</subject><subject>nucleotide sequences</subject><subject>pedigree</subject><subject>Phenotype</subject><subject>Polymorphism, Restriction Fragment Length</subject><subject>Proteins - chemistry</subject><subject>Proteins - genetics</subject><subject>recessive genes</subject><subject>reverse transcriptase polymerase chain reaction</subject><subject>Sequence Homology, Amino Acid</subject><subject>Vesicular Transport Proteins</subject><subject>Wagyu</subject><issn>0938-8990</issn><issn>1432-1777</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqF0cGP1CAUBnBiNO64evSqJCbequ9Bp5SjmayuySQedvfgqaHwmGFtYS2tuv-9TLoH9eIJAj--AB9jLxHeIYB6nwGk3GoNiC0-YhuspahQKfWYbUDLtmrL3hl7lvMtAKoG1VN2hrDVtZDthv3aDSmGeODJ8z79CJH4_uvVNT9QmZnoeHAU5-CDNXNI8cQMH0POFDPxcZnXZZNzssHM5PjPMB_57kgumG_VZTiYfAw830c3pZFO50vSPNBz9sSbIdOLh_Gc3Xy8uN5dVvsvnz7vPuwrK5WYq8a1vZdOixrI1AiOBDZC16bRvrbW9ZZaQNlL59HU5A1J41RZUqg8opXn7O2aezel7wvluSu3tzQMJlJactdoucXyef-FqGoBWpzgm3_gbVqmWB7RIQhUUpa8oqpV2SnlPJHv7qYwmum-oO7UXPdXc8W_ekhd-pHcH3qtqoDXK_AmdeYwhdzdXAnAbakVJGopfwMunJy-</recordid><startdate>19991201</startdate><enddate>19991201</enddate><creator>Kunieda, Tetsuo</creator><creator>Nakagiri, Michiko</creator><creator>Takami, Marika</creator><creator>Ide, Hanako</creator><creator>Ogawa, Hiroyuki</creator><general>Springer-Verlag</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>19991201</creationdate><title>Cloning of bovine LYST gene and identification of a missense mutation associated with Chediak-Higashi syndrome of cattle</title><author>Kunieda, Tetsuo ; Nakagiri, Michiko ; Takami, Marika ; Ide, Hanako ; Ogawa, Hiroyuki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c372t-6d8bf3d9240ea410de216294a69f4ccdbce8013b3df1a4efae3ad7801717f11c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>Amino Acid Sequence</topic><topic>amino acid sequences</topic><topic>amino acid substitution</topic><topic>Amino Acid Substitution - genetics</topic><topic>Animals</topic><topic>arginine</topic><topic>Base Sequence</topic><topic>brain</topic><topic>Cattle</topic><topic>Cattle Diseases - genetics</topic><topic>cDNA libraries</topic><topic>Chediak-Higashi syndrome</topic><topic>Chediak-Higashi Syndrome - genetics</topic><topic>Chediak-Higashi Syndrome - veterinary</topic><topic>Cloning, Molecular</topic><topic>color</topic><topic>complementary DNA</topic><topic>DNA, Complementary - genetics</topic><topic>Genes, Recessive - genetics</topic><topic>Genetics</topic><topic>Genotype</topic><topic>Hair Color - genetics</topic><topic>hemorrhage</topic><topic>histidine</topic><topic>Humans</topic><topic>Liver - metabolism</topic><topic>LYST gene</topic><topic>missense mutation</topic><topic>Molecular Sequence Data</topic><topic>Mutation</topic><topic>Mutation, Missense - genetics</topic><topic>nucleotide sequences</topic><topic>pedigree</topic><topic>Phenotype</topic><topic>Polymorphism, Restriction Fragment Length</topic><topic>Proteins - chemistry</topic><topic>Proteins - genetics</topic><topic>recessive genes</topic><topic>reverse transcriptase polymerase chain reaction</topic><topic>Sequence Homology, Amino Acid</topic><topic>Vesicular Transport Proteins</topic><topic>Wagyu</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kunieda, Tetsuo</creatorcontrib><creatorcontrib>Nakagiri, Michiko</creatorcontrib><creatorcontrib>Takami, Marika</creatorcontrib><creatorcontrib>Ide, Hanako</creatorcontrib><creatorcontrib>Ogawa, Hiroyuki</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Mammalian genome</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kunieda, Tetsuo</au><au>Nakagiri, Michiko</au><au>Takami, Marika</au><au>Ide, Hanako</au><au>Ogawa, Hiroyuki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Cloning of bovine LYST gene and identification of a missense mutation associated with Chediak-Higashi syndrome of cattle</atitle><jtitle>Mammalian genome</jtitle><addtitle>Mamm Genome</addtitle><date>1999-12-01</date><risdate>1999</risdate><volume>10</volume><issue>12</issue><spage>1146</spage><epage>1149</epage><pages>1146-1149</pages><issn>0938-8990</issn><eissn>1432-1777</eissn><abstract>An inheritable bleeding disorder with light coat color caused by an autosomal recessive gene has been reported in a population of Japanese black cattle. The disease has been diagnosed as Chediak-Higashi Syndrome (CHS) of cattle which correspond to a human inheritable disorder caused by mutation in LYST gene. To characterize the molecular lesion causing CHS in cattle, cDNAs encoding bovine LYST were isolated from a bovine brain cDNA library. The nucleotide and deduced amino acid sequences of bovine LYST had 89.6 and 90.2% identity with those of the human LYST gene, respectively. In order to identify the mutation within the LYST gene causing CHS in cattle, cDNA fragments of the LYST gene were amplified from an affected animal by RT-PCR and their nucleotide sequences were completely determined. Notably, a nucleotide substitution of A to G transition, resulting in an amino acid substitution of histidine to arginine (H2015R) was identified in the affected animal. The presence of the substitution was completely corresponding with the occurrence of the CHS phenotype among 105 members of pedigrees of the Japanese black cattle and no cattle of other populations had this substitution. These findings strongly suggested that H2015R is the causative mutation in CHS of Japanese black cattle.</abstract><cop>United States</cop><pub>Springer-Verlag</pub><pmid>10594238</pmid><doi>10.1007/s003359901181</doi><tpages>4</tpages></addata></record> |
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subjects | Amino Acid Sequence amino acid sequences amino acid substitution Amino Acid Substitution - genetics Animals arginine Base Sequence brain Cattle Cattle Diseases - genetics cDNA libraries Chediak-Higashi syndrome Chediak-Higashi Syndrome - genetics Chediak-Higashi Syndrome - veterinary Cloning, Molecular color complementary DNA DNA, Complementary - genetics Genes, Recessive - genetics Genetics Genotype Hair Color - genetics hemorrhage histidine Humans Liver - metabolism LYST gene missense mutation Molecular Sequence Data Mutation Mutation, Missense - genetics nucleotide sequences pedigree Phenotype Polymorphism, Restriction Fragment Length Proteins - chemistry Proteins - genetics recessive genes reverse transcriptase polymerase chain reaction Sequence Homology, Amino Acid Vesicular Transport Proteins Wagyu |
title | Cloning of bovine LYST gene and identification of a missense mutation associated with Chediak-Higashi syndrome of cattle |
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