Biophysical and Biochemical Characterization of a Hyperthermostable and Ca²⁺-independent α-Amylase of an Extreme Thermophile Geobacillus thermoleovorans

α-Amylases reported from various microbial sources have been shown to be moderately thermostable and Ca²⁺ dependent. The bacterial strain used in this investigation is an extremely thermophilic bacterium Geobacillus thermoleovorans that produces a novel α-amylase (26 kDa; α-amylase gt), which is hyp...

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Veröffentlicht in:Applied biochemistry and biotechnology 2008-08, Vol.150 (2), p.205-219
Hauptverfasser: Uma Maheswar Rao, J.L, Satyanarayana, T
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description α-Amylases reported from various microbial sources have been shown to be moderately thermostable and Ca²⁺ dependent. The bacterial strain used in this investigation is an extremely thermophilic bacterium Geobacillus thermoleovorans that produces a novel α-amylase (26 kDa; α-amylase gt), which is hyperthermostable (T(opt) 100 °C) and does not require Ca²⁺ for its activity/stability. These special features of α-amylase gt make it applicable in starch saccharification process. The structural aspects of α-amylase gt are, therefore, of significant interest to understand its structure-function relationship. The circular dichroism spectroscopic data revealed the native α-amylase gt to contain 25% α-helix, 21% β-sheet, and 54% random coils. The addition of urea, at high concentration (8 M), appeared to expose the buried Trp residues of the native α-amylase gt to the aqueous environment and thus showed low fluorophore. Fluorescence-quenching experiments using KI, CsCl, N-bromosuccinimide, and acrylamide revealed interesting features of the tryptophan microenvironment. Analysis of K(sv) and f(a) values of KI, CsCl, and acrylamide suggested the overall Trp microenvironment in α-amylase to be slightly electropositive. Fluorescence-quenching studies with acrylamide revealed the occurrence of both collisional as well as static quenching processes. There was no change in the α-helix content or the enzyme activity with an increase in temperature (60-100 °C) that suggested a critical role of the α-helix content in maintaining the catalytic activity.
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The bacterial strain used in this investigation is an extremely thermophilic bacterium Geobacillus thermoleovorans that produces a novel α-amylase (26 kDa; α-amylase gt), which is hyperthermostable (T(opt) 100 °C) and does not require Ca²⁺ for its activity/stability. These special features of α-amylase gt make it applicable in starch saccharification process. The structural aspects of α-amylase gt are, therefore, of significant interest to understand its structure-function relationship. The circular dichroism spectroscopic data revealed the native α-amylase gt to contain 25% α-helix, 21% β-sheet, and 54% random coils. The addition of urea, at high concentration (8 M), appeared to expose the buried Trp residues of the native α-amylase gt to the aqueous environment and thus showed low fluorophore. Fluorescence-quenching experiments using KI, CsCl, N-bromosuccinimide, and acrylamide revealed interesting features of the tryptophan microenvironment. Analysis of K(sv) and f(a) values of KI, CsCl, and acrylamide suggested the overall Trp microenvironment in α-amylase to be slightly electropositive. Fluorescence-quenching studies with acrylamide revealed the occurrence of both collisional as well as static quenching processes. 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The bacterial strain used in this investigation is an extremely thermophilic bacterium Geobacillus thermoleovorans that produces a novel α-amylase (26 kDa; α-amylase gt), which is hyperthermostable (T(opt) 100 °C) and does not require Ca²⁺ for its activity/stability. These special features of α-amylase gt make it applicable in starch saccharification process. The structural aspects of α-amylase gt are, therefore, of significant interest to understand its structure-function relationship. The circular dichroism spectroscopic data revealed the native α-amylase gt to contain 25% α-helix, 21% β-sheet, and 54% random coils. The addition of urea, at high concentration (8 M), appeared to expose the buried Trp residues of the native α-amylase gt to the aqueous environment and thus showed low fluorophore. Fluorescence-quenching experiments using KI, CsCl, N-bromosuccinimide, and acrylamide revealed interesting features of the tryptophan microenvironment. Analysis of K(sv) and f(a) values of KI, CsCl, and acrylamide suggested the overall Trp microenvironment in α-amylase to be slightly electropositive. Fluorescence-quenching studies with acrylamide revealed the occurrence of both collisional as well as static quenching processes. There was no change in the α-helix content or the enzyme activity with an increase in temperature (60-100 °C) that suggested a critical role of the α-helix content in maintaining the catalytic activity.</description><subject>alpha-amylase</subject><subject>alpha-Amylases - metabolism</subject><subject>Bacillaceae - enzymology</subject><subject>Bacillaceae - genetics</subject><subject>Bacillaceae - metabolism</subject><subject>Bacillus thermoleovorans</subject><subject>Biochemistry</subject><subject>Biological and medical sciences</subject><subject>biophysics</subject><subject>Biotechnology</subject><subject>calcium</subject><subject>Calcium - metabolism</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>circular dichroism spectroscopy</subject><subject>Enzyme Stability</subject><subject>fluorescence</subject><subject>Fundamental and applied biological sciences. 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Psychology</topic><topic>saccharification</topic><topic>starch</topic><topic>strains</topic><topic>Temperature</topic><topic>thermal stability</topic><topic>thermophilic bacteria</topic><topic>tryptophan</topic><topic>urea</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Uma Maheswar Rao, J.L</creatorcontrib><creatorcontrib>Satyanarayana, T</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Applied biochemistry and biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Uma Maheswar Rao, J.L</au><au>Satyanarayana, T</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Biophysical and Biochemical Characterization of a Hyperthermostable and Ca²⁺-independent α-Amylase of an Extreme Thermophile Geobacillus thermoleovorans</atitle><jtitle>Applied biochemistry and biotechnology</jtitle><stitle>Appl Biochem Biotechnol</stitle><addtitle>Appl Biochem Biotechnol</addtitle><date>2008-08-01</date><risdate>2008</risdate><volume>150</volume><issue>2</issue><spage>205</spage><epage>219</epage><pages>205-219</pages><issn>0273-2289</issn><eissn>1559-0291</eissn><coden>ABIBDL</coden><abstract>α-Amylases reported from various microbial sources have been shown to be moderately thermostable and Ca²⁺ dependent. The bacterial strain used in this investigation is an extremely thermophilic bacterium Geobacillus thermoleovorans that produces a novel α-amylase (26 kDa; α-amylase gt), which is hyperthermostable (T(opt) 100 °C) and does not require Ca²⁺ for its activity/stability. These special features of α-amylase gt make it applicable in starch saccharification process. The structural aspects of α-amylase gt are, therefore, of significant interest to understand its structure-function relationship. The circular dichroism spectroscopic data revealed the native α-amylase gt to contain 25% α-helix, 21% β-sheet, and 54% random coils. The addition of urea, at high concentration (8 M), appeared to expose the buried Trp residues of the native α-amylase gt to the aqueous environment and thus showed low fluorophore. Fluorescence-quenching experiments using KI, CsCl, N-bromosuccinimide, and acrylamide revealed interesting features of the tryptophan microenvironment. Analysis of K(sv) and f(a) values of KI, CsCl, and acrylamide suggested the overall Trp microenvironment in α-amylase to be slightly electropositive. Fluorescence-quenching studies with acrylamide revealed the occurrence of both collisional as well as static quenching processes. There was no change in the α-helix content or the enzyme activity with an increase in temperature (60-100 °C) that suggested a critical role of the α-helix content in maintaining the catalytic activity.</abstract><cop>New York</cop><pub>Humana Press Inc</pub><pmid>18443744</pmid><doi>10.1007/s12010-008-8171-x</doi><tpages>15</tpages></addata></record>
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subjects alpha-amylase
alpha-Amylases - metabolism
Bacillaceae - enzymology
Bacillaceae - genetics
Bacillaceae - metabolism
Bacillus thermoleovorans
Biochemistry
Biological and medical sciences
biophysics
Biotechnology
calcium
Calcium - metabolism
Chemistry
Chemistry and Materials Science
circular dichroism spectroscopy
Enzyme Stability
fluorescence
Fundamental and applied biological sciences. Psychology
saccharification
starch
strains
Temperature
thermal stability
thermophilic bacteria
tryptophan
urea
title Biophysical and Biochemical Characterization of a Hyperthermostable and Ca²⁺-independent α-Amylase of an Extreme Thermophile Geobacillus thermoleovorans
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