Identification of a Novel Babesia sp. from a Sable Antelope (Hippotragus niger Harris, 1838)
Babesiosis in a sable antelope (Hippotragus niger Harris, 1838) was first reported in 1930; the parasite was named Babesia irvinesmithi. Recently, specimens from an adult sable that presented with a sudden onset of disease and that subsequently died during immobilization were submitted for molecular...
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description | Babesiosis in a sable antelope (Hippotragus niger Harris, 1838) was first reported in 1930; the parasite was named Babesia irvinesmithi. Recently, specimens from an adult sable that presented with a sudden onset of disease and that subsequently died during immobilization were submitted for molecular characterization. Microscopic examination of thin blood smears revealed the presence of small piroplasms. DNA was extracted from blood samples; the V4 variable region of the 18S rRNA gene was amplified and analyzed using the reverse line blot (RLB) assay. Amplicons did not hybridize with any of the Babesia or Theileria species-specific probes present on the blot and hybridized only with a Babesia or Theileria genus-specific probe, suggesting the presence of a novel species. The full-length 18S rRNA gene sequence was obtained and aligned with published sequences of related genera, and phylogenetic trees were constructed. Sequence similarity analyses indicated that a Babesia species, designated Babesia sp. (sable), was present. The sequence showed its highest similarity to B. orientalis and to an unnamed Babesia species previously detected in bovine samples. The latter was later established to be Babesia occultans. A Babesia sp. (sable)-specific RLB oligonucleotide probe was designed and used to screen 200 South African sable samples, but so far, no other sample has been found to be positive for the presence of Babesia sp. (sable) DNA. In summary, we identified a novel piroplasm parasite from a sable antelope that died from an unknown illness. While the parasite was observed in blood smears, there is no direct evidence that it was the cause of death. |
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Recently, specimens from an adult sable that presented with a sudden onset of disease and that subsequently died during immobilization were submitted for molecular characterization. Microscopic examination of thin blood smears revealed the presence of small piroplasms. DNA was extracted from blood samples; the V4 variable region of the 18S rRNA gene was amplified and analyzed using the reverse line blot (RLB) assay. Amplicons did not hybridize with any of the Babesia or Theileria species-specific probes present on the blot and hybridized only with a Babesia or Theileria genus-specific probe, suggesting the presence of a novel species. The full-length 18S rRNA gene sequence was obtained and aligned with published sequences of related genera, and phylogenetic trees were constructed. Sequence similarity analyses indicated that a Babesia species, designated Babesia sp. (sable), was present. The sequence showed its highest similarity to B. orientalis and to an unnamed Babesia species previously detected in bovine samples. The latter was later established to be Babesia occultans. A Babesia sp. (sable)-specific RLB oligonucleotide probe was designed and used to screen 200 South African sable samples, but so far, no other sample has been found to be positive for the presence of Babesia sp. (sable) DNA. In summary, we identified a novel piroplasm parasite from a sable antelope that died from an unknown illness. While the parasite was observed in blood smears, there is no direct evidence that it was the cause of death.</description><identifier>ISSN: 0095-1137</identifier><identifier>EISSN: 1098-660X</identifier><identifier>EISSN: 1098-5530</identifier><identifier>DOI: 10.1128/JCM.00167-08</identifier><identifier>PMID: 18508943</identifier><identifier>CODEN: JCMIDW</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Animal protozoal diseases ; Animals ; Antelopes - microbiology ; Babesia ; Babesia - classification ; Babesia - isolation & purification ; Babesiosis - parasitology ; Biological and medical sciences ; Blood - parasitology ; DNA Fingerprinting ; DNA, Protozoan - chemistry ; DNA, Protozoan - genetics ; DNA, Ribosomal - chemistry ; DNA, Ribosomal - genetics ; Fundamental and applied biological sciences. Psychology ; Hippotragus niger ; Infectious diseases ; Male ; Medical sciences ; Molecular Sequence Data ; Nucleic Acid Hybridization ; Oligonucleotide Probes - genetics ; Parasitic diseases ; Parasitology ; Phylogeny ; Piroplasmia ; Protozoa ; Protozoal diseases ; RNA, Ribosomal, 18S - genetics ; Sequence Analysis, DNA ; Sequence Homology ; Systematics. Geographical distribution. Morphology. Cytology ; Theileria</subject><ispartof>Journal of Clinical Microbiology, 2008-07, Vol.46 (7), p.2247-2251</ispartof><rights>2009 INIST-CNRS</rights><rights>Copyright © 2008, American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c493t-56470e4f5ce98bc652dea41addd653b28f008e5f066cd1140b449690f6ab956d3</citedby><cites>FETCH-LOGICAL-c493t-56470e4f5ce98bc652dea41addd653b28f008e5f066cd1140b449690f6ab956d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2446884/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2446884/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3175,3176,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20509199$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18508943$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Oosthuizen, Marinda C</creatorcontrib><creatorcontrib>Zweygarth, Erich</creatorcontrib><creatorcontrib>Collins, Nicola E</creatorcontrib><creatorcontrib>Troskie, Milana</creatorcontrib><creatorcontrib>Penzhorn, Banie L</creatorcontrib><title>Identification of a Novel Babesia sp. from a Sable Antelope (Hippotragus niger Harris, 1838)</title><title>Journal of Clinical Microbiology</title><addtitle>J Clin Microbiol</addtitle><description>Babesiosis in a sable antelope (Hippotragus niger Harris, 1838) was first reported in 1930; the parasite was named Babesia irvinesmithi. Recently, specimens from an adult sable that presented with a sudden onset of disease and that subsequently died during immobilization were submitted for molecular characterization. Microscopic examination of thin blood smears revealed the presence of small piroplasms. DNA was extracted from blood samples; the V4 variable region of the 18S rRNA gene was amplified and analyzed using the reverse line blot (RLB) assay. Amplicons did not hybridize with any of the Babesia or Theileria species-specific probes present on the blot and hybridized only with a Babesia or Theileria genus-specific probe, suggesting the presence of a novel species. The full-length 18S rRNA gene sequence was obtained and aligned with published sequences of related genera, and phylogenetic trees were constructed. Sequence similarity analyses indicated that a Babesia species, designated Babesia sp. (sable), was present. The sequence showed its highest similarity to B. orientalis and to an unnamed Babesia species previously detected in bovine samples. The latter was later established to be Babesia occultans. A Babesia sp. (sable)-specific RLB oligonucleotide probe was designed and used to screen 200 South African sable samples, but so far, no other sample has been found to be positive for the presence of Babesia sp. (sable) DNA. In summary, we identified a novel piroplasm parasite from a sable antelope that died from an unknown illness. While the parasite was observed in blood smears, there is no direct evidence that it was the cause of death.</description><subject>Animal protozoal diseases</subject><subject>Animals</subject><subject>Antelopes - microbiology</subject><subject>Babesia</subject><subject>Babesia - classification</subject><subject>Babesia - isolation & purification</subject><subject>Babesiosis - parasitology</subject><subject>Biological and medical sciences</subject><subject>Blood - parasitology</subject><subject>DNA Fingerprinting</subject><subject>DNA, Protozoan - chemistry</subject><subject>DNA, Protozoan - genetics</subject><subject>DNA, Ribosomal - chemistry</subject><subject>DNA, Ribosomal - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hippotragus niger</subject><subject>Infectious diseases</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Molecular Sequence Data</subject><subject>Nucleic Acid Hybridization</subject><subject>Oligonucleotide Probes - genetics</subject><subject>Parasitic diseases</subject><subject>Parasitology</subject><subject>Phylogeny</subject><subject>Piroplasmia</subject><subject>Protozoa</subject><subject>Protozoal diseases</subject><subject>RNA, Ribosomal, 18S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Homology</subject><subject>Systematics. Geographical distribution. Morphology. Cytology</subject><subject>Theileria</subject><issn>0095-1137</issn><issn>1098-660X</issn><issn>1098-5530</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0sFvFCEUBnBiNHat3jwrHjSadNYHAwxcTOpG3Zqqh9rEgwlhGNilmRlGmK3xvxfdTdWTJw7vly88PhB6SGBJCJUv368-LAGIaCqQt9CCgJKVEPDlNloAKF4RUjdH6F7OV0UxxvlddEQkB6lYvUBfzzo3zsEHa-YQRxw9NvhjvHY9fm1al4PBeVpin-JQBhem7R0-HWfXx8nh5-swTXFOZrPLeAwbl_DapBTyCSayli_uozve9Nk9OJzH6PLtm8-rdXX-6d3Z6vS8skzVc8UFa8Axz61TsrWC084ZRkzXdYLXLZUeQDruQQjbEcKgZUwJBV6YVnHR1cfo1T532rWD62zZKJleTykMJv3Q0QT972QMW72J15oyJqRkJeDZISDFbzuXZz2EbF3fm9HFXdZC1cDL0_0XUpCcKkULPNlDm2LOyfmb2xDQv3rTpTf9uzcNsvBHf2_wBx-KKuDpAZhsTe-TGW3IN44CB0WUKu7J3m3DZvs9JKdNHvSVHTQTutGUsqaYx3vjTdRmU_rSlxcUSF3-C2FUiPonCUGzOA</recordid><startdate>20080701</startdate><enddate>20080701</enddate><creator>Oosthuizen, Marinda C</creator><creator>Zweygarth, Erich</creator><creator>Collins, Nicola E</creator><creator>Troskie, Milana</creator><creator>Penzhorn, Banie L</creator><general>American Society for Microbiology</general><general>American Society for Microbiology (ASM)</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>M7N</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20080701</creationdate><title>Identification of a Novel Babesia sp. from a Sable Antelope (Hippotragus niger Harris, 1838)</title><author>Oosthuizen, Marinda C ; Zweygarth, Erich ; Collins, Nicola E ; Troskie, Milana ; Penzhorn, Banie L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c493t-56470e4f5ce98bc652dea41addd653b28f008e5f066cd1140b449690f6ab956d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Animal protozoal diseases</topic><topic>Animals</topic><topic>Antelopes - microbiology</topic><topic>Babesia</topic><topic>Babesia - classification</topic><topic>Babesia - isolation & purification</topic><topic>Babesiosis - parasitology</topic><topic>Biological and medical sciences</topic><topic>Blood - parasitology</topic><topic>DNA Fingerprinting</topic><topic>DNA, Protozoan - chemistry</topic><topic>DNA, Protozoan - genetics</topic><topic>DNA, Ribosomal - chemistry</topic><topic>DNA, Ribosomal - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hippotragus niger</topic><topic>Infectious diseases</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Molecular Sequence Data</topic><topic>Nucleic Acid Hybridization</topic><topic>Oligonucleotide Probes - genetics</topic><topic>Parasitic diseases</topic><topic>Parasitology</topic><topic>Phylogeny</topic><topic>Piroplasmia</topic><topic>Protozoa</topic><topic>Protozoal diseases</topic><topic>RNA, Ribosomal, 18S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology</topic><topic>Systematics. Geographical distribution. Morphology. Cytology</topic><topic>Theileria</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Oosthuizen, Marinda C</creatorcontrib><creatorcontrib>Zweygarth, Erich</creatorcontrib><creatorcontrib>Collins, Nicola E</creatorcontrib><creatorcontrib>Troskie, Milana</creatorcontrib><creatorcontrib>Penzhorn, Banie L</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of Clinical Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Oosthuizen, Marinda C</au><au>Zweygarth, Erich</au><au>Collins, Nicola E</au><au>Troskie, Milana</au><au>Penzhorn, Banie L</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of a Novel Babesia sp. from a Sable Antelope (Hippotragus niger Harris, 1838)</atitle><jtitle>Journal of Clinical Microbiology</jtitle><addtitle>J Clin Microbiol</addtitle><date>2008-07-01</date><risdate>2008</risdate><volume>46</volume><issue>7</issue><spage>2247</spage><epage>2251</epage><pages>2247-2251</pages><issn>0095-1137</issn><eissn>1098-660X</eissn><eissn>1098-5530</eissn><coden>JCMIDW</coden><abstract>Babesiosis in a sable antelope (Hippotragus niger Harris, 1838) was first reported in 1930; the parasite was named Babesia irvinesmithi. Recently, specimens from an adult sable that presented with a sudden onset of disease and that subsequently died during immobilization were submitted for molecular characterization. Microscopic examination of thin blood smears revealed the presence of small piroplasms. DNA was extracted from blood samples; the V4 variable region of the 18S rRNA gene was amplified and analyzed using the reverse line blot (RLB) assay. Amplicons did not hybridize with any of the Babesia or Theileria species-specific probes present on the blot and hybridized only with a Babesia or Theileria genus-specific probe, suggesting the presence of a novel species. The full-length 18S rRNA gene sequence was obtained and aligned with published sequences of related genera, and phylogenetic trees were constructed. Sequence similarity analyses indicated that a Babesia species, designated Babesia sp. (sable), was present. The sequence showed its highest similarity to B. orientalis and to an unnamed Babesia species previously detected in bovine samples. The latter was later established to be Babesia occultans. A Babesia sp. (sable)-specific RLB oligonucleotide probe was designed and used to screen 200 South African sable samples, but so far, no other sample has been found to be positive for the presence of Babesia sp. (sable) DNA. In summary, we identified a novel piroplasm parasite from a sable antelope that died from an unknown illness. While the parasite was observed in blood smears, there is no direct evidence that it was the cause of death.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>18508943</pmid><doi>10.1128/JCM.00167-08</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animal protozoal diseases Animals Antelopes - microbiology Babesia Babesia - classification Babesia - isolation & purification Babesiosis - parasitology Biological and medical sciences Blood - parasitology DNA Fingerprinting DNA, Protozoan - chemistry DNA, Protozoan - genetics DNA, Ribosomal - chemistry DNA, Ribosomal - genetics Fundamental and applied biological sciences. Psychology Hippotragus niger Infectious diseases Male Medical sciences Molecular Sequence Data Nucleic Acid Hybridization Oligonucleotide Probes - genetics Parasitic diseases Parasitology Phylogeny Piroplasmia Protozoa Protozoal diseases RNA, Ribosomal, 18S - genetics Sequence Analysis, DNA Sequence Homology Systematics. Geographical distribution. Morphology. Cytology Theileria |
title | Identification of a Novel Babesia sp. from a Sable Antelope (Hippotragus niger Harris, 1838) |
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