UniProtJAPI: a remote API for accessing UniProt data
Programmatic access to the UniProt Knowledgebase (UniProtKB) is essential for many bioinformatics applications dealing with protein data. We have created a Java library named UniProtJAPI, which facilitates the integration of UniProt data into Java-based software applications. The library supports qu...
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| Veröffentlicht in: | Bioinformatics 2008-05, Vol.24 (10), p.1321-1322 |
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| container_issue | 10 |
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| container_title | Bioinformatics |
| container_volume | 24 |
| creator | Patient, Samuel Wieser, Daniela Kleen, Michael Kretschmann, Ernst Jesus Martin, Maria Apweiler, Rolf |
| description | Programmatic access to the UniProt Knowledgebase (UniProtKB) is essential for many bioinformatics applications dealing with protein data. We have created a Java library named UniProtJAPI, which facilitates the integration of UniProt data into Java-based software applications. The library supports queries and similarity searches that return UniProtKB entries in the form of Java objects. These objects contain functional annotations or sequence information associated with a UniProt entry. Here, we briefly describe the UniProtJAPI and demonstrate its usage. Availability: http://www.ebi.ac.uk/uniprot/remotingAPI Contact: spatient@ebi.ac.uk |
| doi_str_mv | 10.1093/bioinformatics/btn122 |
| format | Article |
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| subjects | Algorithms Biological and medical sciences Databases, Protein Fundamental and applied biological sciences. Psychology General aspects Internet Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Programming Languages Proteins - chemistry Sequence Analysis, Protein - methods Software User-Computer Interface |
| title | UniProtJAPI: a remote API for accessing UniProt data |
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