Identification of drought-induced microRNAs in rice
MicroRNAs (miRNAs) are a large new class of small non-coding RNAs. To date, hundreds of microRNAs have been identified in plants. MicroRNAs play important roles in post-transcriptional gene regulation by targeting mRNAs for cleavage or repressing translation. To better understand microRNA function,...
Gespeichert in:
| Veröffentlicht in: | Biochemical and biophysical research communications 2007-03, Vol.354 (2), p.585-590 |
|---|---|
| Hauptverfasser: | , , , , , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 590 |
|---|---|
| container_issue | 2 |
| container_start_page | 585 |
| container_title | Biochemical and biophysical research communications |
| container_volume | 354 |
| creator | Zhao, Botao Liang, Ruqiang Ge, Liangfa Li, Wei Xiao, Huasheng Lin, Hongxuan Ruan, Kangcheng Jin, Youxin |
| description | MicroRNAs (miRNAs) are a large new class of small non-coding RNAs. To date, hundreds of microRNAs have been identified in plants. MicroRNAs play important roles in post-transcriptional gene regulation by targeting mRNAs for cleavage or repressing translation. To better understand microRNA function, we have used an oligonucleotide microarray to monitor rice (Oryza sativa) microRNA expression profile under drought stress. Two drought-induced microRNAs were identified. Furthermore, miR-169g was confirmed as the only member induced by drought among the miR-169 family and the induction of miR-169g was more prominent in roots than in shoots. Sequence analysis revealed occurrence of two proximate DREs (dehydration-responsive element) in the upstream of the MIR-169g, suggesting that miR-169g expression may be regulated directly by CBF/DREBs. |
| doi_str_mv | 10.1016/j.bbrc.2007.01.022 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_68968014</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0006291X07000666</els_id><sourcerecordid>68968014</sourcerecordid><originalsourceid>FETCH-LOGICAL-c500t-b1afc77e648101a8f708f6cabd484da74f80ce16a9f9fcc6c01f49c55c83a9e43</originalsourceid><addsrcrecordid>eNqFkE1Lw0AURQdRbK3-AReSlbvE99KZSQbcFPGjUBREwd0weZnRKW1SZxLBf29KC-509TbnXu47jJ0jZAgor5ZZVQXKcoAiA8wgzw_YGEFBmiPwQzYGAJnmCt9G7CTGJQAil-qYjbDIBRdCjNl0Xtum886T6XzbJK1L6tD27x9d6pu6J1sna0-hfX6cxcQ3SfBkT9mRM6toz_Z3wl7vbl9uHtLF0_38ZrZISQB0aYXGUVFYycthrildAaWTZKqal7w2BXclkEVplFOOSBKg44qEoHJqlOXTCbvc9W5C-9nb2Om1j2RXK9PYto9alkqWgP-DqEQhCokDmO_A4aMYg3V6E_zahG-NoLdO9VJvneqtUw2oB6dD6GLf3ldrW_9G9hIH4HoH2EHGl7dBR_K2Gdz5YKnTdev_6v8BBGWHLg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>19575761</pqid></control><display><type>article</type><title>Identification of drought-induced microRNAs in rice</title><source>MEDLINE</source><source>Access via ScienceDirect (Elsevier)</source><creator>Zhao, Botao ; Liang, Ruqiang ; Ge, Liangfa ; Li, Wei ; Xiao, Huasheng ; Lin, Hongxuan ; Ruan, Kangcheng ; Jin, Youxin</creator><creatorcontrib>Zhao, Botao ; Liang, Ruqiang ; Ge, Liangfa ; Li, Wei ; Xiao, Huasheng ; Lin, Hongxuan ; Ruan, Kangcheng ; Jin, Youxin</creatorcontrib><description>MicroRNAs (miRNAs) are a large new class of small non-coding RNAs. To date, hundreds of microRNAs have been identified in plants. MicroRNAs play important roles in post-transcriptional gene regulation by targeting mRNAs for cleavage or repressing translation. To better understand microRNA function, we have used an oligonucleotide microarray to monitor rice (Oryza sativa) microRNA expression profile under drought stress. Two drought-induced microRNAs were identified. Furthermore, miR-169g was confirmed as the only member induced by drought among the miR-169 family and the induction of miR-169g was more prominent in roots than in shoots. Sequence analysis revealed occurrence of two proximate DREs (dehydration-responsive element) in the upstream of the MIR-169g, suggesting that miR-169g expression may be regulated directly by CBF/DREBs.</description><identifier>ISSN: 0006-291X</identifier><identifier>EISSN: 1090-2104</identifier><identifier>DOI: 10.1016/j.bbrc.2007.01.022</identifier><identifier>PMID: 17254555</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Base Sequence ; CBF/DREB ; Dehydration ; Disasters ; DRE ; Drought stress ; MicroRNA ; MicroRNAs - analysis ; MicroRNAs - biosynthesis ; miR-169 ; Molecular Sequence Data ; Oligonucleotide Array Sequence Analysis ; Oryza - chemistry ; Oryza - genetics ; Oryza sativa ; Rice ; RNA, Plant - analysis ; RNA, Plant - biosynthesis</subject><ispartof>Biochemical and biophysical research communications, 2007-03, Vol.354 (2), p.585-590</ispartof><rights>2007 Elsevier Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c500t-b1afc77e648101a8f708f6cabd484da74f80ce16a9f9fcc6c01f49c55c83a9e43</citedby><cites>FETCH-LOGICAL-c500t-b1afc77e648101a8f708f6cabd484da74f80ce16a9f9fcc6c01f49c55c83a9e43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.bbrc.2007.01.022$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,782,786,3554,27933,27934,46004</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17254555$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhao, Botao</creatorcontrib><creatorcontrib>Liang, Ruqiang</creatorcontrib><creatorcontrib>Ge, Liangfa</creatorcontrib><creatorcontrib>Li, Wei</creatorcontrib><creatorcontrib>Xiao, Huasheng</creatorcontrib><creatorcontrib>Lin, Hongxuan</creatorcontrib><creatorcontrib>Ruan, Kangcheng</creatorcontrib><creatorcontrib>Jin, Youxin</creatorcontrib><title>Identification of drought-induced microRNAs in rice</title><title>Biochemical and biophysical research communications</title><addtitle>Biochem Biophys Res Commun</addtitle><description>MicroRNAs (miRNAs) are a large new class of small non-coding RNAs. To date, hundreds of microRNAs have been identified in plants. MicroRNAs play important roles in post-transcriptional gene regulation by targeting mRNAs for cleavage or repressing translation. To better understand microRNA function, we have used an oligonucleotide microarray to monitor rice (Oryza sativa) microRNA expression profile under drought stress. Two drought-induced microRNAs were identified. Furthermore, miR-169g was confirmed as the only member induced by drought among the miR-169 family and the induction of miR-169g was more prominent in roots than in shoots. Sequence analysis revealed occurrence of two proximate DREs (dehydration-responsive element) in the upstream of the MIR-169g, suggesting that miR-169g expression may be regulated directly by CBF/DREBs.</description><subject>Base Sequence</subject><subject>CBF/DREB</subject><subject>Dehydration</subject><subject>Disasters</subject><subject>DRE</subject><subject>Drought stress</subject><subject>MicroRNA</subject><subject>MicroRNAs - analysis</subject><subject>MicroRNAs - biosynthesis</subject><subject>miR-169</subject><subject>Molecular Sequence Data</subject><subject>Oligonucleotide Array Sequence Analysis</subject><subject>Oryza - chemistry</subject><subject>Oryza - genetics</subject><subject>Oryza sativa</subject><subject>Rice</subject><subject>RNA, Plant - analysis</subject><subject>RNA, Plant - biosynthesis</subject><issn>0006-291X</issn><issn>1090-2104</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkE1Lw0AURQdRbK3-AReSlbvE99KZSQbcFPGjUBREwd0weZnRKW1SZxLBf29KC-509TbnXu47jJ0jZAgor5ZZVQXKcoAiA8wgzw_YGEFBmiPwQzYGAJnmCt9G7CTGJQAil-qYjbDIBRdCjNl0Xtum886T6XzbJK1L6tD27x9d6pu6J1sna0-hfX6cxcQ3SfBkT9mRM6toz_Z3wl7vbl9uHtLF0_38ZrZISQB0aYXGUVFYycthrildAaWTZKqal7w2BXclkEVplFOOSBKg44qEoHJqlOXTCbvc9W5C-9nb2Om1j2RXK9PYto9alkqWgP-DqEQhCokDmO_A4aMYg3V6E_zahG-NoLdO9VJvneqtUw2oB6dD6GLf3ldrW_9G9hIH4HoH2EHGl7dBR_K2Gdz5YKnTdev_6v8BBGWHLg</recordid><startdate>20070309</startdate><enddate>20070309</enddate><creator>Zhao, Botao</creator><creator>Liang, Ruqiang</creator><creator>Ge, Liangfa</creator><creator>Li, Wei</creator><creator>Xiao, Huasheng</creator><creator>Lin, Hongxuan</creator><creator>Ruan, Kangcheng</creator><creator>Jin, Youxin</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TM</scope><scope>7X8</scope></search><sort><creationdate>20070309</creationdate><title>Identification of drought-induced microRNAs in rice</title><author>Zhao, Botao ; Liang, Ruqiang ; Ge, Liangfa ; Li, Wei ; Xiao, Huasheng ; Lin, Hongxuan ; Ruan, Kangcheng ; Jin, Youxin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c500t-b1afc77e648101a8f708f6cabd484da74f80ce16a9f9fcc6c01f49c55c83a9e43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Base Sequence</topic><topic>CBF/DREB</topic><topic>Dehydration</topic><topic>Disasters</topic><topic>DRE</topic><topic>Drought stress</topic><topic>MicroRNA</topic><topic>MicroRNAs - analysis</topic><topic>MicroRNAs - biosynthesis</topic><topic>miR-169</topic><topic>Molecular Sequence Data</topic><topic>Oligonucleotide Array Sequence Analysis</topic><topic>Oryza - chemistry</topic><topic>Oryza - genetics</topic><topic>Oryza sativa</topic><topic>Rice</topic><topic>RNA, Plant - analysis</topic><topic>RNA, Plant - biosynthesis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Botao</creatorcontrib><creatorcontrib>Liang, Ruqiang</creatorcontrib><creatorcontrib>Ge, Liangfa</creatorcontrib><creatorcontrib>Li, Wei</creatorcontrib><creatorcontrib>Xiao, Huasheng</creatorcontrib><creatorcontrib>Lin, Hongxuan</creatorcontrib><creatorcontrib>Ruan, Kangcheng</creatorcontrib><creatorcontrib>Jin, Youxin</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Nucleic Acids Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Biochemical and biophysical research communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Botao</au><au>Liang, Ruqiang</au><au>Ge, Liangfa</au><au>Li, Wei</au><au>Xiao, Huasheng</au><au>Lin, Hongxuan</au><au>Ruan, Kangcheng</au><au>Jin, Youxin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification of drought-induced microRNAs in rice</atitle><jtitle>Biochemical and biophysical research communications</jtitle><addtitle>Biochem Biophys Res Commun</addtitle><date>2007-03-09</date><risdate>2007</risdate><volume>354</volume><issue>2</issue><spage>585</spage><epage>590</epage><pages>585-590</pages><issn>0006-291X</issn><eissn>1090-2104</eissn><abstract>MicroRNAs (miRNAs) are a large new class of small non-coding RNAs. To date, hundreds of microRNAs have been identified in plants. MicroRNAs play important roles in post-transcriptional gene regulation by targeting mRNAs for cleavage or repressing translation. To better understand microRNA function, we have used an oligonucleotide microarray to monitor rice (Oryza sativa) microRNA expression profile under drought stress. Two drought-induced microRNAs were identified. Furthermore, miR-169g was confirmed as the only member induced by drought among the miR-169 family and the induction of miR-169g was more prominent in roots than in shoots. Sequence analysis revealed occurrence of two proximate DREs (dehydration-responsive element) in the upstream of the MIR-169g, suggesting that miR-169g expression may be regulated directly by CBF/DREBs.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>17254555</pmid><doi>10.1016/j.bbrc.2007.01.022</doi><tpages>6</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0006-291X |
| ispartof | Biochemical and biophysical research communications, 2007-03, Vol.354 (2), p.585-590 |
| issn | 0006-291X 1090-2104 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_68968014 |
| source | MEDLINE; Access via ScienceDirect (Elsevier) |
| subjects | Base Sequence CBF/DREB Dehydration Disasters DRE Drought stress MicroRNA MicroRNAs - analysis MicroRNAs - biosynthesis miR-169 Molecular Sequence Data Oligonucleotide Array Sequence Analysis Oryza - chemistry Oryza - genetics Oryza sativa Rice RNA, Plant - analysis RNA, Plant - biosynthesis |
| title | Identification of drought-induced microRNAs in rice |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-01T05%3A29%3A24IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Identification%20of%20drought-induced%20microRNAs%20in%20rice&rft.jtitle=Biochemical%20and%20biophysical%20research%20communications&rft.au=Zhao,%20Botao&rft.date=2007-03-09&rft.volume=354&rft.issue=2&rft.spage=585&rft.epage=590&rft.pages=585-590&rft.issn=0006-291X&rft.eissn=1090-2104&rft_id=info:doi/10.1016/j.bbrc.2007.01.022&rft_dat=%3Cproquest_cross%3E68968014%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=19575761&rft_id=info:pmid/17254555&rft_els_id=S0006291X07000666&rfr_iscdi=true |