Pseudoalteromonas byunsanensis sp. nov., isolated from tidal flat sediment in Korea
1 School of Biological Sciences and Institute of Microbiology, Seoul National University, Kwanak-gu, Seoul 151-742, Republic of Korea 2 Department of Biology, College of Natural Sciences, Sunchon National University, Sunchon 540-742, Republic of Korea 3 Korean Collection for Type Cultures, Korea Res...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2005-11, Vol.55 (6), p.2519-2523 |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Park, Yoon-Dong Baik, Keun Sik Yi, Hana Bae, Kyung Sook Chun, Jongsik |
| description | 1 School of Biological Sciences and Institute of Microbiology, Seoul National University, Kwanak-gu, Seoul 151-742, Republic of Korea
2 Department of Biology, College of Natural Sciences, Sunchon National University, Sunchon 540-742, Republic of Korea
3 Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, Taejon 305-600, Republic of Korea
Correspondence Jongsik Chun jchun{at}snu.ac.kr
A Gram-negative, motile, strictly aerobic, violet-pigment-producing bacterium, designated strain FR1199 T , was isolated from tidal flat sediment of Byunsan, South Korea. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain FR1199 T represents a distinct line of descent within the genus Pseudoalteromonas . The phenotypic features of strain FR1199 T were similar to those of Pseudoalteromonas phenolica and Pseudoalteromonas luteoviolacea , but several physiological and chemotaxonomical properties readily distinguished strain FR1199 T from these species. Major fatty acids were straight-chain saturated (C 16 : 0 ) and monounsaturated C 18 : 1 7 c fatty acids. The DNA G+C content was 39 mol%. On the basis of polyphasic evidence, it is concluded that the isolate represents a novel species within the genus Pseudoalteromonas , for which the name Pseudoalteromonas byunsanensis sp. nov. is proposed. The type strain is FR1199 T (=JCM 12483 T =KCTC 12274 T ).
Abbreviations: ASW, artificial sea water
Published online ahead of print on 16 September 2005 as DOI 10.1099/ijs.0.63750-0.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of Pseudoalteromonas byunsanensis sp. nov. FR1199 T is DQ011289 . |
| doi_str_mv | 10.1099/ijs.0.63750-0 |
| format | Article |
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2 Department of Biology, College of Natural Sciences, Sunchon National University, Sunchon 540-742, Republic of Korea
3 Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, Taejon 305-600, Republic of Korea
Correspondence Jongsik Chun jchun{at}snu.ac.kr
A Gram-negative, motile, strictly aerobic, violet-pigment-producing bacterium, designated strain FR1199 T , was isolated from tidal flat sediment of Byunsan, South Korea. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain FR1199 T represents a distinct line of descent within the genus Pseudoalteromonas . The phenotypic features of strain FR1199 T were similar to those of Pseudoalteromonas phenolica and Pseudoalteromonas luteoviolacea , but several physiological and chemotaxonomical properties readily distinguished strain FR1199 T from these species. Major fatty acids were straight-chain saturated (C 16 : 0 ) and monounsaturated C 18 : 1 7 c fatty acids. The DNA G+C content was 39 mol%. On the basis of polyphasic evidence, it is concluded that the isolate represents a novel species within the genus Pseudoalteromonas , for which the name Pseudoalteromonas byunsanensis sp. nov. is proposed. The type strain is FR1199 T (=JCM 12483 T =KCTC 12274 T ).
Abbreviations: ASW, artificial sea water
Published online ahead of print on 16 September 2005 as DOI 10.1099/ijs.0.63750-0.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of Pseudoalteromonas byunsanensis sp. nov. FR1199 T is DQ011289 .</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.63750-0</identifier><identifier>PMID: 16280520</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Bacteriology ; Base Composition ; Biological and medical sciences ; DNA, Bacterial - analysis ; DNA, Ribosomal - analysis ; Fatty Acids - analysis ; Fundamental and applied biological sciences. Psychology ; Geologic Sediments - microbiology ; Korea ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Phylogeny ; Pseudoalteromonas ; Pseudoalteromonas - chemistry ; Pseudoalteromonas - classification ; Pseudoalteromonas - genetics ; Pseudoalteromonas - isolation & purification ; Pseudoalteromonas byunsanensis ; RNA, Ribosomal, 16S - analysis ; RNA, Ribosomal, 16S - genetics ; Seawater - microbiology ; Sequence Analysis, DNA ; Systematics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2005-11, Vol.55 (6), p.2519-2523</ispartof><rights>2006 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c354t-62e6a1bf744547c8877d7cb2cd55e94fccad43c540702d103b8f0baca618c99c3</citedby><cites>FETCH-LOGICAL-c354t-62e6a1bf744547c8877d7cb2cd55e94fccad43c540702d103b8f0baca618c99c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3737,3738,27915,27916</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17252978$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16280520$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Park, Yoon-Dong</creatorcontrib><creatorcontrib>Baik, Keun Sik</creatorcontrib><creatorcontrib>Yi, Hana</creatorcontrib><creatorcontrib>Bae, Kyung Sook</creatorcontrib><creatorcontrib>Chun, Jongsik</creatorcontrib><title>Pseudoalteromonas byunsanensis sp. nov., isolated from tidal flat sediment in Korea</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 School of Biological Sciences and Institute of Microbiology, Seoul National University, Kwanak-gu, Seoul 151-742, Republic of Korea
2 Department of Biology, College of Natural Sciences, Sunchon National University, Sunchon 540-742, Republic of Korea
3 Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, Taejon 305-600, Republic of Korea
Correspondence Jongsik Chun jchun{at}snu.ac.kr
A Gram-negative, motile, strictly aerobic, violet-pigment-producing bacterium, designated strain FR1199 T , was isolated from tidal flat sediment of Byunsan, South Korea. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain FR1199 T represents a distinct line of descent within the genus Pseudoalteromonas . The phenotypic features of strain FR1199 T were similar to those of Pseudoalteromonas phenolica and Pseudoalteromonas luteoviolacea , but several physiological and chemotaxonomical properties readily distinguished strain FR1199 T from these species. Major fatty acids were straight-chain saturated (C 16 : 0 ) and monounsaturated C 18 : 1 7 c fatty acids. The DNA G+C content was 39 mol%. On the basis of polyphasic evidence, it is concluded that the isolate represents a novel species within the genus Pseudoalteromonas , for which the name Pseudoalteromonas byunsanensis sp. nov. is proposed. The type strain is FR1199 T (=JCM 12483 T =KCTC 12274 T ).
Abbreviations: ASW, artificial sea water
Published online ahead of print on 16 September 2005 as DOI 10.1099/ijs.0.63750-0.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of Pseudoalteromonas byunsanensis sp. nov. FR1199 T is DQ011289 .</description><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>DNA, Bacterial - analysis</subject><subject>DNA, Ribosomal - analysis</subject><subject>Fatty Acids - analysis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Geologic Sediments - microbiology</subject><subject>Korea</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>Pseudoalteromonas</subject><subject>Pseudoalteromonas - chemistry</subject><subject>Pseudoalteromonas - classification</subject><subject>Pseudoalteromonas - genetics</subject><subject>Pseudoalteromonas - isolation & purification</subject><subject>Pseudoalteromonas byunsanensis</subject><subject>RNA, Ribosomal, 16S - analysis</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Seawater - microbiology</subject><subject>Sequence Analysis, DNA</subject><subject>Systematics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0Mtv1DAQB-AIgegDjlyRL6AeSBg7fuVYVbxEJZCAs-XYTusqsRdPAup_j5dd0SOnGY0-zYx-TfOCQkdhGN7GO-ygk70S0MKj5pRyKVsBPX_8r2fypDlDvAOoA4CnzQmVTINgcNp8-4ph89nOayh5yckiGe-3hDaFhBEJ7jqS8q_uDYmYZ7sGT6YKyRq9nclUJwSDj0tIK4mJfM4l2GfNk8nOGJ4f63nz4_2771cf2-svHz5dXV63rhd8bSUL0tJxUpwLrpzWSnnlRua8EGHgk3PW894JDgqYp9CPeoLROiupdsPg-vPm9WHvruSfW8DVLBFdmOf6fN7QSK2GXoP6L6QDp1roPWwP0JWMWMJkdiUuttwbCmYft6lxGzB_4zZQ_cvj4m1cgn_Qx3wreHUEFp2dp2KTi_jgFBNsULq6i4O7jTe3v2MJ5iakJdY3xpj3R4Uw0jBBh_4PkLKWqw</recordid><startdate>20051101</startdate><enddate>20051101</enddate><creator>Park, Yoon-Dong</creator><creator>Baik, Keun Sik</creator><creator>Yi, Hana</creator><creator>Bae, Kyung Sook</creator><creator>Chun, Jongsik</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20051101</creationdate><title>Pseudoalteromonas byunsanensis sp. nov., isolated from tidal flat sediment in Korea</title><author>Park, Yoon-Dong ; Baik, Keun Sik ; Yi, Hana ; Bae, Kyung Sook ; Chun, Jongsik</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c354t-62e6a1bf744547c8877d7cb2cd55e94fccad43c540702d103b8f0baca618c99c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>DNA, Bacterial - analysis</topic><topic>DNA, Ribosomal - analysis</topic><topic>Fatty Acids - analysis</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Geologic Sediments - microbiology</topic><topic>Korea</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Pseudoalteromonas</topic><topic>Pseudoalteromonas - chemistry</topic><topic>Pseudoalteromonas - classification</topic><topic>Pseudoalteromonas - genetics</topic><topic>Pseudoalteromonas - isolation & purification</topic><topic>Pseudoalteromonas byunsanensis</topic><topic>RNA, Ribosomal, 16S - analysis</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Seawater - microbiology</topic><topic>Sequence Analysis, DNA</topic><topic>Systematics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Park, Yoon-Dong</creatorcontrib><creatorcontrib>Baik, Keun Sik</creatorcontrib><creatorcontrib>Yi, Hana</creatorcontrib><creatorcontrib>Bae, Kyung Sook</creatorcontrib><creatorcontrib>Chun, Jongsik</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Park, Yoon-Dong</au><au>Baik, Keun Sik</au><au>Yi, Hana</au><au>Bae, Kyung Sook</au><au>Chun, Jongsik</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Pseudoalteromonas byunsanensis sp. nov., isolated from tidal flat sediment in Korea</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2005-11-01</date><risdate>2005</risdate><volume>55</volume><issue>6</issue><spage>2519</spage><epage>2523</epage><pages>2519-2523</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 School of Biological Sciences and Institute of Microbiology, Seoul National University, Kwanak-gu, Seoul 151-742, Republic of Korea
2 Department of Biology, College of Natural Sciences, Sunchon National University, Sunchon 540-742, Republic of Korea
3 Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, Taejon 305-600, Republic of Korea
Correspondence Jongsik Chun jchun{at}snu.ac.kr
A Gram-negative, motile, strictly aerobic, violet-pigment-producing bacterium, designated strain FR1199 T , was isolated from tidal flat sediment of Byunsan, South Korea. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain FR1199 T represents a distinct line of descent within the genus Pseudoalteromonas . The phenotypic features of strain FR1199 T were similar to those of Pseudoalteromonas phenolica and Pseudoalteromonas luteoviolacea , but several physiological and chemotaxonomical properties readily distinguished strain FR1199 T from these species. Major fatty acids were straight-chain saturated (C 16 : 0 ) and monounsaturated C 18 : 1 7 c fatty acids. The DNA G+C content was 39 mol%. On the basis of polyphasic evidence, it is concluded that the isolate represents a novel species within the genus Pseudoalteromonas , for which the name Pseudoalteromonas byunsanensis sp. nov. is proposed. The type strain is FR1199 T (=JCM 12483 T =KCTC 12274 T ).
Abbreviations: ASW, artificial sea water
Published online ahead of print on 16 September 2005 as DOI 10.1099/ijs.0.63750-0.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of Pseudoalteromonas byunsanensis sp. nov. FR1199 T is DQ011289 .</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>16280520</pmid><doi>10.1099/ijs.0.63750-0</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Bacteriology Base Composition Biological and medical sciences DNA, Bacterial - analysis DNA, Ribosomal - analysis Fatty Acids - analysis Fundamental and applied biological sciences. Psychology Geologic Sediments - microbiology Korea Microbiology Miscellaneous Molecular Sequence Data Phylogeny Pseudoalteromonas Pseudoalteromonas - chemistry Pseudoalteromonas - classification Pseudoalteromonas - genetics Pseudoalteromonas - isolation & purification Pseudoalteromonas byunsanensis RNA, Ribosomal, 16S - analysis RNA, Ribosomal, 16S - genetics Seawater - microbiology Sequence Analysis, DNA Systematics |
| title | Pseudoalteromonas byunsanensis sp. nov., isolated from tidal flat sediment in Korea |
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