Partial characterization of a novel bacteriophage of Vibrio harveyi isolated from shrimp culture ponds in Thailand
A bacteriophage was isolated together with Vibrio harveyi (VH) 1114 a from a black tiger shrimp-rearing pond in Thailand. By negative staining transmission electron microscopy (TEM), the phage had an icosahedral head (diameter 60–62 nm), a rigid, non-contractile tail (9–10 nm × 100–120 nm) without a...
Gespeichert in:
Veröffentlicht in: | Virus research 2005-12, Vol.114 (1), p.63-69 |
---|---|
Hauptverfasser: | , , , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 69 |
---|---|
container_issue | 1 |
container_start_page | 63 |
container_title | Virus research |
container_volume | 114 |
creator | Pasharawipas, Tirasak Thaikua, Surasak Sriurairatana, Siriporn Ruangpan, Lila Direkbusarakum, Sataporn Manopvisetcharean, Jaroon Flegel, Timothy W. |
description | A bacteriophage was isolated together with
Vibrio harveyi (VH) 1114 a from a black tiger shrimp-rearing pond in Thailand. By negative staining transmission electron microscopy (TEM), the phage had an icosahedral head (diameter 60–62
nm), a rigid, non-contractile tail (9–10
nm
×
100–120
nm) without a collar or terminal fibers and a genome of double stranded DNA of approximately 80
kb as determined by analysis of restriction enzyme digestion fragments. Since these features would place it in the family Siphoviridae, it was tentatively named
V. harveyi siphoviridae-like phage or VHS1. VHS1 could also infect two VH reference strains LMD 22.30 and LMD 80.33 (=ATCC 14126) but yielded smaller plaques than with VH1114. The phage tolerated temperatures as high as 60
°C for up to 2
h and overnight exposure to a broad range of pH. VHS1 lysogens of VH1114 were unstable, contained unaltered VHS1 DNA, were immune to VHS1 lysis and spontaneously released VHS1 in liquid cultures. Approximately 20
kb of the genome has been sequenced and deposited at GenBank but it mostly showed no significant homology with existing sequences in the database. |
doi_str_mv | 10.1016/j.virusres.2005.05.012 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_68780527</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0168170205001711</els_id><sourcerecordid>19957287</sourcerecordid><originalsourceid>FETCH-LOGICAL-c397t-4d9b7e53393331705453e6977d8cf059b1e2026423e9b64bb35862f2784633793</originalsourceid><addsrcrecordid>eNqFkU1LxDAQhoMouq7-hSUnb13z0SbNTRG_QNCDeg1pOnWzdJuatAv6603ZFY_CQBjmeWcy8yK0oGRJCRWX6-XWhTEGiEtGSLGcgrIDNKOlZJnMFTtEswSWGZWEnaDTGNeEEMGlOEYnVBDGWc5nKLyYMDjTYrsywdgBgvs2g_Md9g02uPNbaHG1K_h-ZT5gKry7KqU4Sbbw5bCLvjUD1LgJfoPjKrhNj-3YDmMA3Puujth1-HVlXGu6-gwdNaaNcL5_5-jt7vb15iF7er5_vLl-yixXcsjyWlUSCs4V5zwtUeQFB6GkrEvbkEJVFBhhImccVCXyquJFKVjDZJkLzqXic3Sx69sH_zlCHPTGRQtt-gP4MWpRypIUTP4LUqUKycoJFDvQBh_T7Rvdp1VN-NKU6MkWvda_tujJFj0FZUm42E8Yqw3Uf7K9Dwm42gGQDrJ1EHS0DjoLtQtgB11799-MH6ktooU</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>19957287</pqid></control><display><type>article</type><title>Partial characterization of a novel bacteriophage of Vibrio harveyi isolated from shrimp culture ponds in Thailand</title><source>MEDLINE</source><source>Elsevier ScienceDirect Journals Complete</source><creator>Pasharawipas, Tirasak ; Thaikua, Surasak ; Sriurairatana, Siriporn ; Ruangpan, Lila ; Direkbusarakum, Sataporn ; Manopvisetcharean, Jaroon ; Flegel, Timothy W.</creator><creatorcontrib>Pasharawipas, Tirasak ; Thaikua, Surasak ; Sriurairatana, Siriporn ; Ruangpan, Lila ; Direkbusarakum, Sataporn ; Manopvisetcharean, Jaroon ; Flegel, Timothy W.</creatorcontrib><description>A bacteriophage was isolated together with
Vibrio harveyi (VH) 1114 a from a black tiger shrimp-rearing pond in Thailand. By negative staining transmission electron microscopy (TEM), the phage had an icosahedral head (diameter 60–62
nm), a rigid, non-contractile tail (9–10
nm
×
100–120
nm) without a collar or terminal fibers and a genome of double stranded DNA of approximately 80
kb as determined by analysis of restriction enzyme digestion fragments. Since these features would place it in the family Siphoviridae, it was tentatively named
V. harveyi siphoviridae-like phage or VHS1. VHS1 could also infect two VH reference strains LMD 22.30 and LMD 80.33 (=ATCC 14126) but yielded smaller plaques than with VH1114. The phage tolerated temperatures as high as 60
°C for up to 2
h and overnight exposure to a broad range of pH. VHS1 lysogens of VH1114 were unstable, contained unaltered VHS1 DNA, were immune to VHS1 lysis and spontaneously released VHS1 in liquid cultures. Approximately 20
kb of the genome has been sequenced and deposited at GenBank but it mostly showed no significant homology with existing sequences in the database.</description><identifier>ISSN: 0168-1702</identifier><identifier>EISSN: 1872-7492</identifier><identifier>DOI: 10.1016/j.virusres.2005.05.012</identifier><identifier>PMID: 16023243</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Animals ; Aquaculture ; Bacteriophages - classification ; Bacteriophages - genetics ; DNA, Viral - analysis ; DNA, Viral - genetics ; DNA, Viral - isolation & purification ; Genome, Viral ; Lysogeny ; Marine ; Molecular Sequence Data ; Penaeidae ; Penaeidae - growth & development ; Penaeidae - microbiology ; Restriction Mapping ; Sequence Analysis, DNA ; Siphoviridae ; Siphovirus ; Thailand ; Vibrio - isolation & purification ; Vibrio - virology ; Vibrio harveyi</subject><ispartof>Virus research, 2005-12, Vol.114 (1), p.63-69</ispartof><rights>2005 Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c397t-4d9b7e53393331705453e6977d8cf059b1e2026423e9b64bb35862f2784633793</citedby><cites>FETCH-LOGICAL-c397t-4d9b7e53393331705453e6977d8cf059b1e2026423e9b64bb35862f2784633793</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.virusres.2005.05.012$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16023243$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Pasharawipas, Tirasak</creatorcontrib><creatorcontrib>Thaikua, Surasak</creatorcontrib><creatorcontrib>Sriurairatana, Siriporn</creatorcontrib><creatorcontrib>Ruangpan, Lila</creatorcontrib><creatorcontrib>Direkbusarakum, Sataporn</creatorcontrib><creatorcontrib>Manopvisetcharean, Jaroon</creatorcontrib><creatorcontrib>Flegel, Timothy W.</creatorcontrib><title>Partial characterization of a novel bacteriophage of Vibrio harveyi isolated from shrimp culture ponds in Thailand</title><title>Virus research</title><addtitle>Virus Res</addtitle><description>A bacteriophage was isolated together with
Vibrio harveyi (VH) 1114 a from a black tiger shrimp-rearing pond in Thailand. By negative staining transmission electron microscopy (TEM), the phage had an icosahedral head (diameter 60–62
nm), a rigid, non-contractile tail (9–10
nm
×
100–120
nm) without a collar or terminal fibers and a genome of double stranded DNA of approximately 80
kb as determined by analysis of restriction enzyme digestion fragments. Since these features would place it in the family Siphoviridae, it was tentatively named
V. harveyi siphoviridae-like phage or VHS1. VHS1 could also infect two VH reference strains LMD 22.30 and LMD 80.33 (=ATCC 14126) but yielded smaller plaques than with VH1114. The phage tolerated temperatures as high as 60
°C for up to 2
h and overnight exposure to a broad range of pH. VHS1 lysogens of VH1114 were unstable, contained unaltered VHS1 DNA, were immune to VHS1 lysis and spontaneously released VHS1 in liquid cultures. Approximately 20
kb of the genome has been sequenced and deposited at GenBank but it mostly showed no significant homology with existing sequences in the database.</description><subject>Animals</subject><subject>Aquaculture</subject><subject>Bacteriophages - classification</subject><subject>Bacteriophages - genetics</subject><subject>DNA, Viral - analysis</subject><subject>DNA, Viral - genetics</subject><subject>DNA, Viral - isolation & purification</subject><subject>Genome, Viral</subject><subject>Lysogeny</subject><subject>Marine</subject><subject>Molecular Sequence Data</subject><subject>Penaeidae</subject><subject>Penaeidae - growth & development</subject><subject>Penaeidae - microbiology</subject><subject>Restriction Mapping</subject><subject>Sequence Analysis, DNA</subject><subject>Siphoviridae</subject><subject>Siphovirus</subject><subject>Thailand</subject><subject>Vibrio - isolation & purification</subject><subject>Vibrio - virology</subject><subject>Vibrio harveyi</subject><issn>0168-1702</issn><issn>1872-7492</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1LxDAQhoMouq7-hSUnb13z0SbNTRG_QNCDeg1pOnWzdJuatAv6603ZFY_CQBjmeWcy8yK0oGRJCRWX6-XWhTEGiEtGSLGcgrIDNKOlZJnMFTtEswSWGZWEnaDTGNeEEMGlOEYnVBDGWc5nKLyYMDjTYrsywdgBgvs2g_Md9g02uPNbaHG1K_h-ZT5gKry7KqU4Sbbw5bCLvjUD1LgJfoPjKrhNj-3YDmMA3Puujth1-HVlXGu6-gwdNaaNcL5_5-jt7vb15iF7er5_vLl-yixXcsjyWlUSCs4V5zwtUeQFB6GkrEvbkEJVFBhhImccVCXyquJFKVjDZJkLzqXic3Sx69sH_zlCHPTGRQtt-gP4MWpRypIUTP4LUqUKycoJFDvQBh_T7Rvdp1VN-NKU6MkWvda_tujJFj0FZUm42E8Yqw3Uf7K9Dwm42gGQDrJ1EHS0DjoLtQtgB11799-MH6ktooU</recordid><startdate>20051201</startdate><enddate>20051201</enddate><creator>Pasharawipas, Tirasak</creator><creator>Thaikua, Surasak</creator><creator>Sriurairatana, Siriporn</creator><creator>Ruangpan, Lila</creator><creator>Direkbusarakum, Sataporn</creator><creator>Manopvisetcharean, Jaroon</creator><creator>Flegel, Timothy W.</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H94</scope><scope>H95</scope><scope>H98</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20051201</creationdate><title>Partial characterization of a novel bacteriophage of Vibrio harveyi isolated from shrimp culture ponds in Thailand</title><author>Pasharawipas, Tirasak ; Thaikua, Surasak ; Sriurairatana, Siriporn ; Ruangpan, Lila ; Direkbusarakum, Sataporn ; Manopvisetcharean, Jaroon ; Flegel, Timothy W.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c397t-4d9b7e53393331705453e6977d8cf059b1e2026423e9b64bb35862f2784633793</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Animals</topic><topic>Aquaculture</topic><topic>Bacteriophages - classification</topic><topic>Bacteriophages - genetics</topic><topic>DNA, Viral - analysis</topic><topic>DNA, Viral - genetics</topic><topic>DNA, Viral - isolation & purification</topic><topic>Genome, Viral</topic><topic>Lysogeny</topic><topic>Marine</topic><topic>Molecular Sequence Data</topic><topic>Penaeidae</topic><topic>Penaeidae - growth & development</topic><topic>Penaeidae - microbiology</topic><topic>Restriction Mapping</topic><topic>Sequence Analysis, DNA</topic><topic>Siphoviridae</topic><topic>Siphovirus</topic><topic>Thailand</topic><topic>Vibrio - isolation & purification</topic><topic>Vibrio - virology</topic><topic>Vibrio harveyi</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pasharawipas, Tirasak</creatorcontrib><creatorcontrib>Thaikua, Surasak</creatorcontrib><creatorcontrib>Sriurairatana, Siriporn</creatorcontrib><creatorcontrib>Ruangpan, Lila</creatorcontrib><creatorcontrib>Direkbusarakum, Sataporn</creatorcontrib><creatorcontrib>Manopvisetcharean, Jaroon</creatorcontrib><creatorcontrib>Flegel, Timothy W.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Aquaculture Abstracts</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Virus research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pasharawipas, Tirasak</au><au>Thaikua, Surasak</au><au>Sriurairatana, Siriporn</au><au>Ruangpan, Lila</au><au>Direkbusarakum, Sataporn</au><au>Manopvisetcharean, Jaroon</au><au>Flegel, Timothy W.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Partial characterization of a novel bacteriophage of Vibrio harveyi isolated from shrimp culture ponds in Thailand</atitle><jtitle>Virus research</jtitle><addtitle>Virus Res</addtitle><date>2005-12-01</date><risdate>2005</risdate><volume>114</volume><issue>1</issue><spage>63</spage><epage>69</epage><pages>63-69</pages><issn>0168-1702</issn><eissn>1872-7492</eissn><abstract>A bacteriophage was isolated together with
Vibrio harveyi (VH) 1114 a from a black tiger shrimp-rearing pond in Thailand. By negative staining transmission electron microscopy (TEM), the phage had an icosahedral head (diameter 60–62
nm), a rigid, non-contractile tail (9–10
nm
×
100–120
nm) without a collar or terminal fibers and a genome of double stranded DNA of approximately 80
kb as determined by analysis of restriction enzyme digestion fragments. Since these features would place it in the family Siphoviridae, it was tentatively named
V. harveyi siphoviridae-like phage or VHS1. VHS1 could also infect two VH reference strains LMD 22.30 and LMD 80.33 (=ATCC 14126) but yielded smaller plaques than with VH1114. The phage tolerated temperatures as high as 60
°C for up to 2
h and overnight exposure to a broad range of pH. VHS1 lysogens of VH1114 were unstable, contained unaltered VHS1 DNA, were immune to VHS1 lysis and spontaneously released VHS1 in liquid cultures. Approximately 20
kb of the genome has been sequenced and deposited at GenBank but it mostly showed no significant homology with existing sequences in the database.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>16023243</pmid><doi>10.1016/j.virusres.2005.05.012</doi><tpages>7</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0168-1702 |
ispartof | Virus research, 2005-12, Vol.114 (1), p.63-69 |
issn | 0168-1702 1872-7492 |
language | eng |
recordid | cdi_proquest_miscellaneous_68780527 |
source | MEDLINE; Elsevier ScienceDirect Journals Complete |
subjects | Animals Aquaculture Bacteriophages - classification Bacteriophages - genetics DNA, Viral - analysis DNA, Viral - genetics DNA, Viral - isolation & purification Genome, Viral Lysogeny Marine Molecular Sequence Data Penaeidae Penaeidae - growth & development Penaeidae - microbiology Restriction Mapping Sequence Analysis, DNA Siphoviridae Siphovirus Thailand Vibrio - isolation & purification Vibrio - virology Vibrio harveyi |
title | Partial characterization of a novel bacteriophage of Vibrio harveyi isolated from shrimp culture ponds in Thailand |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-04T11%3A23%3A23IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Partial%20characterization%20of%20a%20novel%20bacteriophage%20of%20Vibrio%20harveyi%20isolated%20from%20shrimp%20culture%20ponds%20in%20Thailand&rft.jtitle=Virus%20research&rft.au=Pasharawipas,%20Tirasak&rft.date=2005-12-01&rft.volume=114&rft.issue=1&rft.spage=63&rft.epage=69&rft.pages=63-69&rft.issn=0168-1702&rft.eissn=1872-7492&rft_id=info:doi/10.1016/j.virusres.2005.05.012&rft_dat=%3Cproquest_cross%3E19957287%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=19957287&rft_id=info:pmid/16023243&rft_els_id=S0168170205001711&rfr_iscdi=true |