Molecular systematics of rhizobia based on maximum likelihood and Bayesian phylogenies inferred from rrs, atpD, recA and nifH sequences, and their use in the classification of Sesbania microsymbionts from Venezuelan wetlands

A well-resolved rhizobial species phylogeny with 51 haplotypes was inferred from a combined atpD+ recA data set using Bayesian inference with best-fit, gene-specific substitution models. Relatively dense taxon sampling for the genera Rhizobium and Mesorhizobium was achieved by generating atpD and re...

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Veröffentlicht in:	Systematic and applied microbiology 2005-10, Vol.28 (8), p.702-716
Hauptverfasser:	Vinuesa, Pablo, Silva, Claudia, Lorite, María José, Izaguirre-Mayoral, María Luisa, Bedmar, Eulogio J., Martínez-Romero, Esperanza
Format:	Artikel
Sprache:	eng
Schlagworte:	Bacteriology Base Sequence Bayes Theorem Bayesian phylogenetics Bayesian theory Biological and medical sciences Fabaceae - microbiology Fabaceae - physiology Fundamental and applied biological sciences. Psychology Genes, Bacterial - genetics Genetic Variation Maximum likelihood maximum likelihood analysis Mesorhizobium plurifarium Microbiology Miscellaneous Molecular Sequence Data Molecular systematics Nitrogen Fixation - genetics Nitrogen-fixation nucleotide sequences Phylogeny Plasmids Polymerase Chain Reaction Polymorphism, Restriction Fragment Length Recombination Rhizobiaceae - classification Rhizobiaceae - genetics Rhizobiaceae - physiology Rhizobiales Rhizobium huautlense ribosomal DNA Sequence Alignment Sesbania Sesbania exasperata Sesbania punicea Sesbania sericea Soil Microbiology Species Specificity symbionts Symbiosis Venezuela wetlands
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