Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3
Abscisic acid-responsive gene expression is regulated by numerous transcription factors, including a subgroup of basic leucine zipper factors that bind to the conserved cis-acting sequences known as ABA-responsive elements. Although one of these factors, ABA-insensitive 5 (ABI5), was identified gene...
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description | Abscisic acid-responsive gene expression is regulated by numerous transcription factors, including a subgroup of basic leucine zipper factors that bind to the conserved cis-acting sequences known as ABA-responsive elements. Although one of these factors, ABA-insensitive 5 (ABI5), was identified genetically, the paucity of genetic data for the other family members has left it unclear whether they perform unique functions or act redundantly to ABI5 or each other. To test for potential redundancy with ABI5, we identified the family members with most similar effects and interactions in transient expression systems (ABF3 and ABF1), then characterized loss-of-function lines for those loci. The abf1 and abf3 monogenic mutant lines had at most minimal effects on germination or seed-specific gene expression, but the enhanced ABA- and stress-resistance of abf3 abi5 double mutants revealed redundant action of these genes in multiple stress responses of seeds and seedlings. Although ABI5, ABF3, and ABF1 have some overlapping effects, they appear to antagonistically regulate each other's expression at specific stages. Consequently, loss of any one factor may be partially compensated by increased expression of other family members. |
doi_str_mv | 10.1007/s11103-005-8767-2 |
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Although one of these factors, ABA-insensitive 5 (ABI5), was identified genetically, the paucity of genetic data for the other family members has left it unclear whether they perform unique functions or act redundantly to ABI5 or each other. To test for potential redundancy with ABI5, we identified the family members with most similar effects and interactions in transient expression systems (ABF3 and ABF1), then characterized loss-of-function lines for those loci. The abf1 and abf3 monogenic mutant lines had at most minimal effects on germination or seed-specific gene expression, but the enhanced ABA- and stress-resistance of abf3 abi5 double mutants revealed redundant action of these genes in multiple stress responses of seeds and seedlings. Although ABI5, ABF3, and ABF1 have some overlapping effects, they appear to antagonistically regulate each other's expression at specific stages. Consequently, loss of any one factor may be partially compensated by increased expression of other family members.</description><identifier>ISSN: 0167-4412</identifier><identifier>EISSN: 1573-5028</identifier><identifier>DOI: 10.1007/s11103-005-8767-2</identifier><identifier>PMID: 16247556</identifier><language>eng</language><publisher>Netherlands: Springer Nature B.V</publisher><subject>ABA response element binding factor ; Abscisic acid ; Abscisic Acid - metabolism ; Abscisic Acid - pharmacology ; Arabidopsis - genetics ; Arabidopsis - metabolism ; Arabidopsis Proteins - genetics ; Arabidopsis Proteins - metabolism ; Arabidopsis thaliana ; Basic-Leucine Zipper Transcription Factors - genetics ; Basic-Leucine Zipper Transcription Factors - metabolism ; binding sites ; corn ; Dose-Response Relationship, Drug ; Gene Deletion ; Gene expression ; Gene Expression Profiling ; gene expression regulation ; Gene Expression Regulation, Developmental - drug effects ; Gene Expression Regulation, Plant - drug effects ; genes ; Genes, Reporter ; Genetics ; Germination - drug effects ; loci ; Multigene Family ; mutants ; Oryza sativa ; osmotic pressure ; promoter regions ; Promoter Regions, Genetic ; Proteins ; rice ; salt stress ; seed germination ; seedling growth ; Seedlings ; Seedlings - drug effects ; Seedlings - genetics ; Seedlings - growth & development ; seeds ; Sodium Chloride - pharmacology ; sorbitol ; Sorbitol - pharmacology ; transcription factors ; Transcriptional Activation ; Zea mays</subject><ispartof>Plant molecular biology, 2005-09, Vol.59 (2), p.253-267</ispartof><rights>Springer 2005</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c447t-49a0be83ce61240849b560bb609bc8685bf74573ff3bd1588ce5dca6e0842e903</citedby><cites>FETCH-LOGICAL-c447t-49a0be83ce61240849b560bb609bc8685bf74573ff3bd1588ce5dca6e0842e903</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,27911,27912</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16247556$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Finkelstein, R</creatorcontrib><creatorcontrib>Gampala, S.S.L</creatorcontrib><creatorcontrib>Lynch, T.J</creatorcontrib><creatorcontrib>Thomas, T.L</creatorcontrib><creatorcontrib>Rock, C.D</creatorcontrib><title>Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3</title><title>Plant molecular biology</title><addtitle>Plant Mol Biol</addtitle><description>Abscisic acid-responsive gene expression is regulated by numerous transcription factors, including a subgroup of basic leucine zipper factors that bind to the conserved cis-acting sequences known as ABA-responsive elements. Although one of these factors, ABA-insensitive 5 (ABI5), was identified genetically, the paucity of genetic data for the other family members has left it unclear whether they perform unique functions or act redundantly to ABI5 or each other. To test for potential redundancy with ABI5, we identified the family members with most similar effects and interactions in transient expression systems (ABF3 and ABF1), then characterized loss-of-function lines for those loci. The abf1 and abf3 monogenic mutant lines had at most minimal effects on germination or seed-specific gene expression, but the enhanced ABA- and stress-resistance of abf3 abi5 double mutants revealed redundant action of these genes in multiple stress responses of seeds and seedlings. Although ABI5, ABF3, and ABF1 have some overlapping effects, they appear to antagonistically regulate each other's expression at specific stages. Consequently, loss of any one factor may be partially compensated by increased expression of other family members.</description><subject>ABA response element binding factor</subject><subject>Abscisic acid</subject><subject>Abscisic Acid - metabolism</subject><subject>Abscisic Acid - pharmacology</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis - metabolism</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Arabidopsis Proteins - metabolism</subject><subject>Arabidopsis thaliana</subject><subject>Basic-Leucine Zipper Transcription Factors - genetics</subject><subject>Basic-Leucine Zipper Transcription Factors - metabolism</subject><subject>binding sites</subject><subject>corn</subject><subject>Dose-Response Relationship, Drug</subject><subject>Gene Deletion</subject><subject>Gene expression</subject><subject>Gene Expression Profiling</subject><subject>gene expression regulation</subject><subject>Gene Expression Regulation, Developmental - drug effects</subject><subject>Gene Expression Regulation, Plant - drug effects</subject><subject>genes</subject><subject>Genes, Reporter</subject><subject>Genetics</subject><subject>Germination - drug effects</subject><subject>loci</subject><subject>Multigene Family</subject><subject>mutants</subject><subject>Oryza sativa</subject><subject>osmotic pressure</subject><subject>promoter regions</subject><subject>Promoter Regions, Genetic</subject><subject>Proteins</subject><subject>rice</subject><subject>salt stress</subject><subject>seed germination</subject><subject>seedling growth</subject><subject>Seedlings</subject><subject>Seedlings - drug effects</subject><subject>Seedlings - genetics</subject><subject>Seedlings - growth & development</subject><subject>seeds</subject><subject>Sodium Chloride - pharmacology</subject><subject>sorbitol</subject><subject>Sorbitol - pharmacology</subject><subject>transcription factors</subject><subject>Transcriptional Activation</subject><subject>Zea mays</subject><issn>0167-4412</issn><issn>1573-5028</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNqFkU9r2zAYh8VoWdNuH2CXVexQ1oO2V__lo5MlnaGkkKS7ClmWW5fETi37sG8_ZQkMdulFglfP74deHoQ-UfhGAfT3SCkFTgAkMVppwt6hCZWaEwnMnKEJ0DQUgrILdBnjC0BKcfUeXVDFhJZSTVC7CtXYVq4dsGsrXDVxaFo_4HpMZ9O1EXc1Hp4Dzqc57kPcp1HA2843hwkpluv5cl1sil_zr_m0uJV_W_Lpak6mxfJHsbzDi3y2eVjh9Ly45R_Qee22MXw83VfocTHfzH6S-4e7YpbfEy-EHojIHJTBcB8UZQKMyEqpoCwVZKU3ysiy1iItWte8rKg0xgdZeadCQlnIgF-hm2Pvvu9exxAHu2uiD9uta0M3RquMZoZm5k2QagZUikPjl__Al27s27SE1SoDCZDxBNEj5Psuxj7Udt83O9f_thTsQZk9KrNJmT0osyxlPp-Kx3IXqn-Jk6MEXB-B2nXWPfVNtI_r9CuedMpMSMb_ADFJlEk</recordid><startdate>20050901</startdate><enddate>20050901</enddate><creator>Finkelstein, R</creator><creator>Gampala, S.S.L</creator><creator>Lynch, T.J</creator><creator>Thomas, T.L</creator><creator>Rock, C.D</creator><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20050901</creationdate><title>Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3</title><author>Finkelstein, R ; Gampala, S.S.L ; Lynch, T.J ; Thomas, T.L ; Rock, C.D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c447t-49a0be83ce61240849b560bb609bc8685bf74573ff3bd1588ce5dca6e0842e903</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>ABA response element binding factor</topic><topic>Abscisic acid</topic><topic>Abscisic Acid - metabolism</topic><topic>Abscisic Acid - pharmacology</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis - metabolism</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis Proteins - metabolism</topic><topic>Arabidopsis thaliana</topic><topic>Basic-Leucine Zipper Transcription Factors - genetics</topic><topic>Basic-Leucine Zipper Transcription Factors - metabolism</topic><topic>binding sites</topic><topic>corn</topic><topic>Dose-Response Relationship, Drug</topic><topic>Gene Deletion</topic><topic>Gene expression</topic><topic>Gene Expression Profiling</topic><topic>gene expression regulation</topic><topic>Gene Expression Regulation, Developmental - drug effects</topic><topic>Gene Expression Regulation, Plant - drug effects</topic><topic>genes</topic><topic>Genes, Reporter</topic><topic>Genetics</topic><topic>Germination - drug effects</topic><topic>loci</topic><topic>Multigene Family</topic><topic>mutants</topic><topic>Oryza sativa</topic><topic>osmotic pressure</topic><topic>promoter regions</topic><topic>Promoter Regions, Genetic</topic><topic>Proteins</topic><topic>rice</topic><topic>salt stress</topic><topic>seed germination</topic><topic>seedling growth</topic><topic>Seedlings</topic><topic>Seedlings - drug effects</topic><topic>Seedlings - genetics</topic><topic>Seedlings - growth & development</topic><topic>seeds</topic><topic>Sodium Chloride - pharmacology</topic><topic>sorbitol</topic><topic>Sorbitol - pharmacology</topic><topic>transcription factors</topic><topic>Transcriptional Activation</topic><topic>Zea mays</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Finkelstein, R</creatorcontrib><creatorcontrib>Gampala, S.S.L</creatorcontrib><creatorcontrib>Lynch, T.J</creatorcontrib><creatorcontrib>Thomas, T.L</creatorcontrib><creatorcontrib>Rock, C.D</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection (ProQuest)</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Plant molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Finkelstein, R</au><au>Gampala, S.S.L</au><au>Lynch, T.J</au><au>Thomas, T.L</au><au>Rock, C.D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3</atitle><jtitle>Plant molecular biology</jtitle><addtitle>Plant Mol Biol</addtitle><date>2005-09-01</date><risdate>2005</risdate><volume>59</volume><issue>2</issue><spage>253</spage><epage>267</epage><pages>253-267</pages><issn>0167-4412</issn><eissn>1573-5028</eissn><abstract>Abscisic acid-responsive gene expression is regulated by numerous transcription factors, including a subgroup of basic leucine zipper factors that bind to the conserved cis-acting sequences known as ABA-responsive elements. Although one of these factors, ABA-insensitive 5 (ABI5), was identified genetically, the paucity of genetic data for the other family members has left it unclear whether they perform unique functions or act redundantly to ABI5 or each other. To test for potential redundancy with ABI5, we identified the family members with most similar effects and interactions in transient expression systems (ABF3 and ABF1), then characterized loss-of-function lines for those loci. The abf1 and abf3 monogenic mutant lines had at most minimal effects on germination or seed-specific gene expression, but the enhanced ABA- and stress-resistance of abf3 abi5 double mutants revealed redundant action of these genes in multiple stress responses of seeds and seedlings. Although ABI5, ABF3, and ABF1 have some overlapping effects, they appear to antagonistically regulate each other's expression at specific stages. Consequently, loss of any one factor may be partially compensated by increased expression of other family members.</abstract><cop>Netherlands</cop><pub>Springer Nature B.V</pub><pmid>16247556</pmid><doi>10.1007/s11103-005-8767-2</doi><tpages>15</tpages></addata></record> |
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subjects | ABA response element binding factor Abscisic acid Abscisic Acid - metabolism Abscisic Acid - pharmacology Arabidopsis - genetics Arabidopsis - metabolism Arabidopsis Proteins - genetics Arabidopsis Proteins - metabolism Arabidopsis thaliana Basic-Leucine Zipper Transcription Factors - genetics Basic-Leucine Zipper Transcription Factors - metabolism binding sites corn Dose-Response Relationship, Drug Gene Deletion Gene expression Gene Expression Profiling gene expression regulation Gene Expression Regulation, Developmental - drug effects Gene Expression Regulation, Plant - drug effects genes Genes, Reporter Genetics Germination - drug effects loci Multigene Family mutants Oryza sativa osmotic pressure promoter regions Promoter Regions, Genetic Proteins rice salt stress seed germination seedling growth Seedlings Seedlings - drug effects Seedlings - genetics Seedlings - growth & development seeds Sodium Chloride - pharmacology sorbitol Sorbitol - pharmacology transcription factors Transcriptional Activation Zea mays |
title | Redundant and distinct functions of the ABA response loci ABA-INSENSITIVE(ABI)5 and ABRE-BINDING FACTOR (ABF)3 |
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