Two new major subunits in the cellulosome of Clostridium thermocellum: xyloglucanase Xgh74A and endoxylanase Xyn10D

1 Research Group Microbial Biotechnology, Technische Universität München, Am Hochanger 4, D-85350 Freising-Weihenstephan, Germany 2 Institute of Molecular Genetics, Russian Academy of Science, Kurchatov Sq., 123182 Moscow, Russia 3 GSF - National Research Center for Environment and Health, Institute...

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Veröffentlicht in:Microbiology (Society for General Microbiology) 2005-10, Vol.151 (10), p.3395-3401
Hauptverfasser: Zverlov, Vladimir V, Schantz, Nicolaus, Schmitt-Kopplin, Philippe, Schwarz, Wolfgang H
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container_title Microbiology (Society for General Microbiology)
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creator Zverlov, Vladimir V
Schantz, Nicolaus
Schmitt-Kopplin, Philippe
Schwarz, Wolfgang H
description 1 Research Group Microbial Biotechnology, Technische Universität München, Am Hochanger 4, D-85350 Freising-Weihenstephan, Germany 2 Institute of Molecular Genetics, Russian Academy of Science, Kurchatov Sq., 123182 Moscow, Russia 3 GSF - National Research Center for Environment and Health, Institute for Ecological Chemistry, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany Correspondence Wolfgang H. Schwarz schwarz{at}mikro.biologie.tu-muenchen.de The structure and enzymic activity of xyloglucanase Xgh74A and endoxylanase Xyn10D, components in the cellulosomes of cellulose-grown Clostridium thermocellum , were determined. Xyn10D is a thermostable endo-1,4- -xylanase with a module composition identical to Xyn10C (CBM22-GH10-Doc). It hydrolyses xylan and mixed-linkage 1,3-1,4- -glucan with a temperature optimum of 80 °C. Xyloglucanase Xgh74A contains a catalytic module of GHF74 in addition to a C-terminal dockerin module. It hydrolyses every fourth -1,4-glucan bond in the xyloglucan backbone, thus producing decorated cellotetraose units. Its low activity on CMC and lack of activity on amorphous cellulose indicates recognition of the xylosidic side chains present in xyloglucan, which is readily hydrolysed (295 U mg –1 ). The pattern of the hydrolysis products from tamarind xyloglucan resembles that of other GHF74 xyloglucan endoglucanases. The data indicate that Xgh74A and Xyn10D contribute to the in vivo degradation of the hemicelluloses xyloglucan and xylan by the cellulosome of C. thermocellum . Xgh74A is the first xyloglucanase identified in C. thermocellum and the only enzyme in the cellulosome that hydrolyses tamarind xyloglucan. Abbreviations: CBM, carbohydrate-binding module; CMC, carboxymethylcellulose; ESI/MS, electrospray ionization/mass spectrometry; GH/GHF, glycosyl hydrolase/glycosyl hydrolase family; PASC, phosphoric-acid-swollen cellulose The GenBank/EMBL/DDBJ accession numbers for the sequences reported in this paper are AJ585344 ( xghA ) and AJ585345 ( xynD ).
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Schwarz schwarz{at}mikro.biologie.tu-muenchen.de The structure and enzymic activity of xyloglucanase Xgh74A and endoxylanase Xyn10D, components in the cellulosomes of cellulose-grown Clostridium thermocellum , were determined. Xyn10D is a thermostable endo-1,4- -xylanase with a module composition identical to Xyn10C (CBM22-GH10-Doc). It hydrolyses xylan and mixed-linkage 1,3-1,4- -glucan with a temperature optimum of 80 °C. Xyloglucanase Xgh74A contains a catalytic module of GHF74 in addition to a C-terminal dockerin module. It hydrolyses every fourth -1,4-glucan bond in the xyloglucan backbone, thus producing decorated cellotetraose units. Its low activity on CMC and lack of activity on amorphous cellulose indicates recognition of the xylosidic side chains present in xyloglucan, which is readily hydrolysed (295 U mg –1 ). The pattern of the hydrolysis products from tamarind xyloglucan resembles that of other GHF74 xyloglucan endoglucanases. The data indicate that Xgh74A and Xyn10D contribute to the in vivo degradation of the hemicelluloses xyloglucan and xylan by the cellulosome of C. thermocellum . Xgh74A is the first xyloglucanase identified in C. thermocellum and the only enzyme in the cellulosome that hydrolyses tamarind xyloglucan. Abbreviations: CBM, carbohydrate-binding module; CMC, carboxymethylcellulose; ESI/MS, electrospray ionization/mass spectrometry; GH/GHF, glycosyl hydrolase/glycosyl hydrolase family; PASC, phosphoric-acid-swollen cellulose The GenBank/EMBL/DDBJ accession numbers for the sequences reported in this paper are AJ585344 ( xghA ) and AJ585345 ( xynD ).</description><identifier>ISSN: 1350-0872</identifier><identifier>EISSN: 1465-2080</identifier><identifier>DOI: 10.1099/mic.0.28206-0</identifier><identifier>PMID: 16207921</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Catalytic Domain ; Cellulosomes - enzymology ; Clostridium thermocellum ; Clostridium thermocellum - enzymology ; Clostridium thermocellum - growth &amp; development ; Endo-1,4-beta Xylanases - chemistry ; Endo-1,4-beta Xylanases - genetics ; Endo-1,4-beta Xylanases - isolation &amp; purification ; Endo-1,4-beta Xylanases - metabolism ; Glucans - metabolism ; Glycoside Hydrolases - chemistry ; Glycoside Hydrolases - genetics ; Glycoside Hydrolases - isolation &amp; purification ; Glycoside Hydrolases - metabolism ; Hydrogen-Ion Concentration ; Molecular Sequence Data ; Sequence Analysis, DNA ; Temperature ; Xylans - metabolism</subject><ispartof>Microbiology (Society for General Microbiology), 2005-10, Vol.151 (10), p.3395-3401</ispartof><rights>2006 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c422t-8d3900ade36bbdff1d4e33a173c5666dfd3d7b5661223c1154d3a8182eb633683</citedby><cites>FETCH-LOGICAL-c422t-8d3900ade36bbdff1d4e33a173c5666dfd3d7b5661223c1154d3a8182eb633683</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,782,786,27931,27932</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=17175479$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16207921$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zverlov, Vladimir V</creatorcontrib><creatorcontrib>Schantz, Nicolaus</creatorcontrib><creatorcontrib>Schmitt-Kopplin, Philippe</creatorcontrib><creatorcontrib>Schwarz, Wolfgang H</creatorcontrib><title>Two new major subunits in the cellulosome of Clostridium thermocellum: xyloglucanase Xgh74A and endoxylanase Xyn10D</title><title>Microbiology (Society for General Microbiology)</title><addtitle>Microbiology</addtitle><description>1 Research Group Microbial Biotechnology, Technische Universität München, Am Hochanger 4, D-85350 Freising-Weihenstephan, Germany 2 Institute of Molecular Genetics, Russian Academy of Science, Kurchatov Sq., 123182 Moscow, Russia 3 GSF - National Research Center for Environment and Health, Institute for Ecological Chemistry, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany Correspondence Wolfgang H. Schwarz schwarz{at}mikro.biologie.tu-muenchen.de The structure and enzymic activity of xyloglucanase Xgh74A and endoxylanase Xyn10D, components in the cellulosomes of cellulose-grown Clostridium thermocellum , were determined. Xyn10D is a thermostable endo-1,4- -xylanase with a module composition identical to Xyn10C (CBM22-GH10-Doc). It hydrolyses xylan and mixed-linkage 1,3-1,4- -glucan with a temperature optimum of 80 °C. Xyloglucanase Xgh74A contains a catalytic module of GHF74 in addition to a C-terminal dockerin module. It hydrolyses every fourth -1,4-glucan bond in the xyloglucan backbone, thus producing decorated cellotetraose units. Its low activity on CMC and lack of activity on amorphous cellulose indicates recognition of the xylosidic side chains present in xyloglucan, which is readily hydrolysed (295 U mg –1 ). The pattern of the hydrolysis products from tamarind xyloglucan resembles that of other GHF74 xyloglucan endoglucanases. The data indicate that Xgh74A and Xyn10D contribute to the in vivo degradation of the hemicelluloses xyloglucan and xylan by the cellulosome of C. thermocellum . Xgh74A is the first xyloglucanase identified in C. thermocellum and the only enzyme in the cellulosome that hydrolyses tamarind xyloglucan. Abbreviations: CBM, carbohydrate-binding module; CMC, carboxymethylcellulose; ESI/MS, electrospray ionization/mass spectrometry; GH/GHF, glycosyl hydrolase/glycosyl hydrolase family; PASC, phosphoric-acid-swollen cellulose The GenBank/EMBL/DDBJ accession numbers for the sequences reported in this paper are AJ585344 ( xghA ) and AJ585345 ( xynD ).</description><subject>Catalytic Domain</subject><subject>Cellulosomes - enzymology</subject><subject>Clostridium thermocellum</subject><subject>Clostridium thermocellum - enzymology</subject><subject>Clostridium thermocellum - growth &amp; development</subject><subject>Endo-1,4-beta Xylanases - chemistry</subject><subject>Endo-1,4-beta Xylanases - genetics</subject><subject>Endo-1,4-beta Xylanases - isolation &amp; purification</subject><subject>Endo-1,4-beta Xylanases - metabolism</subject><subject>Glucans - metabolism</subject><subject>Glycoside Hydrolases - chemistry</subject><subject>Glycoside Hydrolases - genetics</subject><subject>Glycoside Hydrolases - isolation &amp; purification</subject><subject>Glycoside Hydrolases - metabolism</subject><subject>Hydrogen-Ion Concentration</subject><subject>Molecular Sequence Data</subject><subject>Sequence Analysis, DNA</subject><subject>Temperature</subject><subject>Xylans - metabolism</subject><issn>1350-0872</issn><issn>1465-2080</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0Utr3DAQAGBTWpo07bHXokt7KHgzI1mS3VvYPhII5JJCb0aW5F0FW0olm83--8pZQ449adB8mhk0RfERYYPQNJej0xvY0JqCKOFVcY6V4CWFGl7nmHEooZb0rHiX0gNATgK-Lc5QUJANxfMi3R8C8fZARvUQIklzN3s3JeI8mfaWaDsM8xBSGC0JPdnmcIrOuHlc0nEMz2D8Rp6OQ9gNs1ZeJUv-7PayuiLKG2K9CTm53h89wvf3xZteDcl-WM-L4vfPH_fb6_L27tfN9uq21BWlU1kb1gAoY5noOtP3aCrLmELJNBdCmN4wI7scIqVMI_LKMFVjTW0nGBM1uyi-nOo-xvB3tmlqR5eWgZW3YU6tqIWQvMH_QpQVrTkXGZYnqGNIKdq-fYxuVPHYIrTLOvJD3UL7vI4Wsv-0Fp670ZoXvf5_Bp9XoJJWQx-V1y69OImSV7LJ7uvJ7d1uf3DRtjvrc68YOheWpshxmYGxhrN_d82h_Q</recordid><startdate>20051001</startdate><enddate>20051001</enddate><creator>Zverlov, Vladimir V</creator><creator>Schantz, Nicolaus</creator><creator>Schmitt-Kopplin, Philippe</creator><creator>Schwarz, Wolfgang H</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20051001</creationdate><title>Two new major subunits in the cellulosome of Clostridium thermocellum: xyloglucanase Xgh74A and endoxylanase Xyn10D</title><author>Zverlov, Vladimir V ; Schantz, Nicolaus ; Schmitt-Kopplin, Philippe ; Schwarz, Wolfgang H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c422t-8d3900ade36bbdff1d4e33a173c5666dfd3d7b5661223c1154d3a8182eb633683</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Catalytic Domain</topic><topic>Cellulosomes - enzymology</topic><topic>Clostridium thermocellum</topic><topic>Clostridium thermocellum - enzymology</topic><topic>Clostridium thermocellum - growth &amp; development</topic><topic>Endo-1,4-beta Xylanases - chemistry</topic><topic>Endo-1,4-beta Xylanases - genetics</topic><topic>Endo-1,4-beta Xylanases - isolation &amp; purification</topic><topic>Endo-1,4-beta Xylanases - metabolism</topic><topic>Glucans - metabolism</topic><topic>Glycoside Hydrolases - chemistry</topic><topic>Glycoside Hydrolases - genetics</topic><topic>Glycoside Hydrolases - isolation &amp; purification</topic><topic>Glycoside Hydrolases - metabolism</topic><topic>Hydrogen-Ion Concentration</topic><topic>Molecular Sequence Data</topic><topic>Sequence Analysis, DNA</topic><topic>Temperature</topic><topic>Xylans - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zverlov, Vladimir V</creatorcontrib><creatorcontrib>Schantz, Nicolaus</creatorcontrib><creatorcontrib>Schmitt-Kopplin, Philippe</creatorcontrib><creatorcontrib>Schwarz, Wolfgang H</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>Microbiology (Society for General Microbiology)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zverlov, Vladimir V</au><au>Schantz, Nicolaus</au><au>Schmitt-Kopplin, Philippe</au><au>Schwarz, Wolfgang H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Two new major subunits in the cellulosome of Clostridium thermocellum: xyloglucanase Xgh74A and endoxylanase Xyn10D</atitle><jtitle>Microbiology (Society for General Microbiology)</jtitle><addtitle>Microbiology</addtitle><date>2005-10-01</date><risdate>2005</risdate><volume>151</volume><issue>10</issue><spage>3395</spage><epage>3401</epage><pages>3395-3401</pages><issn>1350-0872</issn><eissn>1465-2080</eissn><abstract>1 Research Group Microbial Biotechnology, Technische Universität München, Am Hochanger 4, D-85350 Freising-Weihenstephan, Germany 2 Institute of Molecular Genetics, Russian Academy of Science, Kurchatov Sq., 123182 Moscow, Russia 3 GSF - National Research Center for Environment and Health, Institute for Ecological Chemistry, Ingolstädter Landstrasse 1, D-85764 Neuherberg, Germany Correspondence Wolfgang H. Schwarz schwarz{at}mikro.biologie.tu-muenchen.de The structure and enzymic activity of xyloglucanase Xgh74A and endoxylanase Xyn10D, components in the cellulosomes of cellulose-grown Clostridium thermocellum , were determined. Xyn10D is a thermostable endo-1,4- -xylanase with a module composition identical to Xyn10C (CBM22-GH10-Doc). It hydrolyses xylan and mixed-linkage 1,3-1,4- -glucan with a temperature optimum of 80 °C. Xyloglucanase Xgh74A contains a catalytic module of GHF74 in addition to a C-terminal dockerin module. It hydrolyses every fourth -1,4-glucan bond in the xyloglucan backbone, thus producing decorated cellotetraose units. Its low activity on CMC and lack of activity on amorphous cellulose indicates recognition of the xylosidic side chains present in xyloglucan, which is readily hydrolysed (295 U mg –1 ). The pattern of the hydrolysis products from tamarind xyloglucan resembles that of other GHF74 xyloglucan endoglucanases. The data indicate that Xgh74A and Xyn10D contribute to the in vivo degradation of the hemicelluloses xyloglucan and xylan by the cellulosome of C. thermocellum . Xgh74A is the first xyloglucanase identified in C. thermocellum and the only enzyme in the cellulosome that hydrolyses tamarind xyloglucan. Abbreviations: CBM, carbohydrate-binding module; CMC, carboxymethylcellulose; ESI/MS, electrospray ionization/mass spectrometry; GH/GHF, glycosyl hydrolase/glycosyl hydrolase family; PASC, phosphoric-acid-swollen cellulose The GenBank/EMBL/DDBJ accession numbers for the sequences reported in this paper are AJ585344 ( xghA ) and AJ585345 ( xynD ).</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>16207921</pmid><doi>10.1099/mic.0.28206-0</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record>
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subjects Catalytic Domain
Cellulosomes - enzymology
Clostridium thermocellum
Clostridium thermocellum - enzymology
Clostridium thermocellum - growth & development
Endo-1,4-beta Xylanases - chemistry
Endo-1,4-beta Xylanases - genetics
Endo-1,4-beta Xylanases - isolation & purification
Endo-1,4-beta Xylanases - metabolism
Glucans - metabolism
Glycoside Hydrolases - chemistry
Glycoside Hydrolases - genetics
Glycoside Hydrolases - isolation & purification
Glycoside Hydrolases - metabolism
Hydrogen-Ion Concentration
Molecular Sequence Data
Sequence Analysis, DNA
Temperature
Xylans - metabolism
title Two new major subunits in the cellulosome of Clostridium thermocellum: xyloglucanase Xgh74A and endoxylanase Xyn10D
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