Haplotype diversity: the link between statistical and biological association
In the rapidly growing field of association mapping in plants, the use of (marker) haplotypes rather than single markers can be an effective way of improving detection power. Here, we highlight the information that can be obtained from deducing the historical relationships between haplotypes. The or...
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creator | Buntjer, Jaap B. Sørensen, Anker P. Peleman, Johan D. |
description | In the rapidly growing field of association mapping in plants, the use of (marker) haplotypes rather than single markers can be an effective way of improving detection power. Here, we highlight the information that can be obtained from deducing the historical relationships between haplotypes. The ordering of haplotype classes according to deduced historical relationships should further enhance association detection power, but can also be used to predict the genotypic and phenotypic values of unobserved germplasm. |
doi_str_mv | 10.1016/j.tplants.2005.08.007 |
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Here, we highlight the information that can be obtained from deducing the historical relationships between haplotypes. The ordering of haplotype classes according to deduced historical relationships should further enhance association detection power, but can also be used to predict the genotypic and phenotypic values of unobserved germplasm.</description><subject>Agronomy. Soil science and plant productions</subject><subject>Biological and medical sciences</subject><subject>chromosome mapping</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genetic markers</subject><subject>Genetic Markers - genetics</subject><subject>Genetic Variation - genetics</subject><subject>Genetics and breeding of economic plants</subject><subject>haplotypes</subject><subject>Haplotypes - genetics</subject><subject>Heterosis. Floral biology applications: apomixy, male sterility, incompatibility, varia</subject><subject>linkage (genetics)</subject><subject>Linkage Disequilibrium</subject><subject>literature reviews</subject><subject>Plant breeding: fundamental aspects and methodology</subject><subject>plant genetics</subject><subject>Plants - genetics</subject><issn>1360-1385</issn><issn>1878-4372</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0U2P1CAYwHFiNO7rR1B7WW-tz1MKZbwYs3Fdk0k86J4JpU9Xxk6pwOxmvr1s2mSPe6KEH4X8YewdQoWA8tOuSvNophSrGkBUoCqA9hU7RdWqsuFt_Tp_cwklciVO2FmMO8gClXzLTlCiaLjCU7a9NfPo03GmoncPFKJLx89F-kPF6Ka_RUfpkWgqYjLJxeSsGQsz9UXn_Ojvl2mM3rq87KcL9mYwY6TLdTxndzfffl_fltuf339cf92WtmlUKkkq0XVNT4gKOmmosfkuA2BrhbQoLOc4kJSqb4ibwW5QEvSbjmzbypobfs4-Lv-dg_93oJj03kVLY-5B_hC1VFK0gPWLENum3oCQGYoF2uBjDDToObi9CUeNoJ96651ee-un3hqUzjXzvvfrAYduT_3zrjVwBlcrMDHXGoKZrIvPLj8Ib6TI7sPiBuO1uQ_Z3P2qATkg8A2XKosvi6Bc9sFR0NE6miz1LpBNuvfuhcv-BxyGqxQ</recordid><startdate>20051001</startdate><enddate>20051001</enddate><creator>Buntjer, Jaap B.</creator><creator>Sørensen, Anker P.</creator><creator>Peleman, Johan D.</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20051001</creationdate><title>Haplotype diversity: the link between statistical and biological association</title><author>Buntjer, Jaap B. ; Sørensen, Anker P. ; Peleman, Johan D.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c448t-e685bb4de1180b6ae4c381f017c56c15c331fe668d4e3afc916e0d9bec77623a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Agronomy. 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subjects | Agronomy. Soil science and plant productions Biological and medical sciences chromosome mapping Fundamental and applied biological sciences. Psychology genetic markers Genetic Markers - genetics Genetic Variation - genetics Genetics and breeding of economic plants haplotypes Haplotypes - genetics Heterosis. Floral biology applications: apomixy, male sterility, incompatibility, varia linkage (genetics) Linkage Disequilibrium literature reviews Plant breeding: fundamental aspects and methodology plant genetics Plants - genetics |
title | Haplotype diversity: the link between statistical and biological association |
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