Molecular cytogenetics and allotetraploidy in the red vizcacha rat, Tympanoctomys barrerae (Rodentia, Octodontidae)
The theoretical impossibility of polyploidy in mammals was overturned by the discovery of tetraploidy in the red vizcacha rat, Tympanoctomys barrerae (2 n = 102). As a consequence of genome duplication, remarkably increased cell dimensions are observed in the spermatozoa and in different somatic cel...
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Veröffentlicht in: | Genomics (San Diego, Calif.) Calif.), 2006-08, Vol.88 (2), p.214-221 |
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creator | Gallardo, M.H. González, C.A. Cebrián, I. |
description | The theoretical impossibility of polyploidy in mammals was overturned by the discovery of tetraploidy in the red vizcacha rat,
Tympanoctomys barrerae (2
n = 102). As a consequence of genome duplication, remarkably increased cell dimensions are observed in the spermatozoa and in different somatic cell lines of this species. Locus duplication had been previously demonstrated by in situ PCR and Southern blot analysis of single-copy genes. Here, we corroborate duplication of loci in multiple-copy (major rDNAs) and single-copy (
Hoxc8) genes by fluorescence in situ hybridization. We also demonstrate that nucleolar dominance, a large-scale epigenetic silencing phenomenon characteristic of allopolyploids, explains the presence of only one Ag-NOR chromosome pair in
T. barrerae. Nucleolar dominance, together with the chromosomal heteromorphism detected in the G-banding pattern and synaptonemal complexes of the species’ diploid-like meiosis, consistently indicates allotetraploidy. Allotetraploidization can coherently explain the peculiarities of gene silencing, cell dimensions, and karyotypic features of
T. barrerae that remain unexplained by assuming diploidy and a large genome size attained by the dispersion of repetitive sequences. |
doi_str_mv | 10.1016/j.ygeno.2006.02.010 |
format | Article |
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Tympanoctomys barrerae (2
n = 102). As a consequence of genome duplication, remarkably increased cell dimensions are observed in the spermatozoa and in different somatic cell lines of this species. Locus duplication had been previously demonstrated by in situ PCR and Southern blot analysis of single-copy genes. Here, we corroborate duplication of loci in multiple-copy (major rDNAs) and single-copy (
Hoxc8) genes by fluorescence in situ hybridization. We also demonstrate that nucleolar dominance, a large-scale epigenetic silencing phenomenon characteristic of allopolyploids, explains the presence of only one Ag-NOR chromosome pair in
T. barrerae. Nucleolar dominance, together with the chromosomal heteromorphism detected in the G-banding pattern and synaptonemal complexes of the species’ diploid-like meiosis, consistently indicates allotetraploidy. Allotetraploidization can coherently explain the peculiarities of gene silencing, cell dimensions, and karyotypic features of
T. barrerae that remain unexplained by assuming diploidy and a large genome size attained by the dispersion of repetitive sequences.</description><identifier>ISSN: 0888-7543</identifier><identifier>EISSN: 1089-8646</identifier><identifier>DOI: 10.1016/j.ygeno.2006.02.010</identifier><identifier>PMID: 16580173</identifier><language>eng</language><publisher>San Diego, CA: Elsevier Inc</publisher><subject>Allotetraploidy ; Animals ; Biological and medical sciences ; Cells, Cultured ; Chromosome Segregation ; DNA, Ribosomal - metabolism ; Fundamental and applied biological sciences. Psychology ; Genes. Genome ; Genetics of eukaryotes. Biological and molecular evolution ; In Situ Hybridization, Fluorescence ; Karyotyping ; Male ; Molecular and cellular biology ; Molecular genetics ; NORs ; Nucleolar dominance ; Polyploidy ; Red vizcacha rat ; Repetitive Sequences, Nucleic Acid ; Rodentia - genetics ; Rodentia - metabolism ; Tympanoctomys ; Tympanoctomys barrerae</subject><ispartof>Genomics (San Diego, Calif.), 2006-08, Vol.88 (2), p.214-221</ispartof><rights>2006 Elsevier Inc.</rights><rights>2006 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c463t-a1044b0c558977634f5f5071b5617e0288bc127d208047315e3b151916ef5c53</citedby><cites>FETCH-LOGICAL-c463t-a1044b0c558977634f5f5071b5617e0288bc127d208047315e3b151916ef5c53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0888754306000504$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18013674$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16580173$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gallardo, M.H.</creatorcontrib><creatorcontrib>González, C.A.</creatorcontrib><creatorcontrib>Cebrián, I.</creatorcontrib><title>Molecular cytogenetics and allotetraploidy in the red vizcacha rat, Tympanoctomys barrerae (Rodentia, Octodontidae)</title><title>Genomics (San Diego, Calif.)</title><addtitle>Genomics</addtitle><description>The theoretical impossibility of polyploidy in mammals was overturned by the discovery of tetraploidy in the red vizcacha rat,
Tympanoctomys barrerae (2
n = 102). As a consequence of genome duplication, remarkably increased cell dimensions are observed in the spermatozoa and in different somatic cell lines of this species. Locus duplication had been previously demonstrated by in situ PCR and Southern blot analysis of single-copy genes. Here, we corroborate duplication of loci in multiple-copy (major rDNAs) and single-copy (
Hoxc8) genes by fluorescence in situ hybridization. We also demonstrate that nucleolar dominance, a large-scale epigenetic silencing phenomenon characteristic of allopolyploids, explains the presence of only one Ag-NOR chromosome pair in
T. barrerae. Nucleolar dominance, together with the chromosomal heteromorphism detected in the G-banding pattern and synaptonemal complexes of the species’ diploid-like meiosis, consistently indicates allotetraploidy. Allotetraploidization can coherently explain the peculiarities of gene silencing, cell dimensions, and karyotypic features of
T. barrerae that remain unexplained by assuming diploidy and a large genome size attained by the dispersion of repetitive sequences.</description><subject>Allotetraploidy</subject><subject>Animals</subject><subject>Biological and medical sciences</subject><subject>Cells, Cultured</subject><subject>Chromosome Segregation</subject><subject>DNA, Ribosomal - metabolism</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes. Genome</subject><subject>Genetics of eukaryotes. Biological and molecular evolution</subject><subject>In Situ Hybridization, Fluorescence</subject><subject>Karyotyping</subject><subject>Male</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>NORs</subject><subject>Nucleolar dominance</subject><subject>Polyploidy</subject><subject>Red vizcacha rat</subject><subject>Repetitive Sequences, Nucleic Acid</subject><subject>Rodentia - genetics</subject><subject>Rodentia - metabolism</subject><subject>Tympanoctomys</subject><subject>Tympanoctomys barrerae</subject><issn>0888-7543</issn><issn>1089-8646</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU2LFDEQhoMo7rj6CwTJRVHYbiudj04fPMjiF6wsyNxDOql2M3R3xiSz0P56e5yBvempCuqpl6IeQl4yqBkw9X5XLz9xjnUDoGpoamDwiGwY6K7SSqjHZANa66qVgl-QZznvAKDjunlKLpiSGljLNyR_jyO6w2gTdUuJayCW4DK1s6d2HGPBkux-jMEvNMy03CFN6Ol9-O2su7M02XJFt8u0t3N0JU5Lpr1NCZNF-vZH9DiXYK_o7Trzce29xXfPyZPBjhlfnOsl2X7-tL3-Wt3cfvl2_fGmckLxUlkGQvTgpNRd2youBjlIaFkvFWsRGq17x5rWN6BBtJxJ5D2TrGMKB-kkvyRvTrH7FH8dMBczhexwHO2M8ZCN0koK1Yj_gqzjIBU_JvIT6FLMOeFg9ilMNi2GgTk6MTvz14k5OjHQmNXJuvXqHH_oJ_QPO2cJK_D6DNjs7DgkO7uQH7iV4qo93vnhxOH6tPuAyWQXcHboQ0JXjI_hn4f8AaTuqxs</recordid><startdate>20060801</startdate><enddate>20060801</enddate><creator>Gallardo, M.H.</creator><creator>González, C.A.</creator><creator>Cebrián, I.</creator><general>Elsevier Inc</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20060801</creationdate><title>Molecular cytogenetics and allotetraploidy in the red vizcacha rat, Tympanoctomys barrerae (Rodentia, Octodontidae)</title><author>Gallardo, M.H. ; González, C.A. ; Cebrián, I.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c463t-a1044b0c558977634f5f5071b5617e0288bc127d208047315e3b151916ef5c53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Allotetraploidy</topic><topic>Animals</topic><topic>Biological and medical sciences</topic><topic>Cells, Cultured</topic><topic>Chromosome Segregation</topic><topic>DNA, Ribosomal - metabolism</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes. Genome</topic><topic>Genetics of eukaryotes. Biological and molecular evolution</topic><topic>In Situ Hybridization, Fluorescence</topic><topic>Karyotyping</topic><topic>Male</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>NORs</topic><topic>Nucleolar dominance</topic><topic>Polyploidy</topic><topic>Red vizcacha rat</topic><topic>Repetitive Sequences, Nucleic Acid</topic><topic>Rodentia - genetics</topic><topic>Rodentia - metabolism</topic><topic>Tympanoctomys</topic><topic>Tympanoctomys barrerae</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gallardo, M.H.</creatorcontrib><creatorcontrib>González, C.A.</creatorcontrib><creatorcontrib>Cebrián, I.</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Genomics (San Diego, Calif.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gallardo, M.H.</au><au>González, C.A.</au><au>Cebrián, I.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular cytogenetics and allotetraploidy in the red vizcacha rat, Tympanoctomys barrerae (Rodentia, Octodontidae)</atitle><jtitle>Genomics (San Diego, Calif.)</jtitle><addtitle>Genomics</addtitle><date>2006-08-01</date><risdate>2006</risdate><volume>88</volume><issue>2</issue><spage>214</spage><epage>221</epage><pages>214-221</pages><issn>0888-7543</issn><eissn>1089-8646</eissn><abstract>The theoretical impossibility of polyploidy in mammals was overturned by the discovery of tetraploidy in the red vizcacha rat,
Tympanoctomys barrerae (2
n = 102). As a consequence of genome duplication, remarkably increased cell dimensions are observed in the spermatozoa and in different somatic cell lines of this species. Locus duplication had been previously demonstrated by in situ PCR and Southern blot analysis of single-copy genes. Here, we corroborate duplication of loci in multiple-copy (major rDNAs) and single-copy (
Hoxc8) genes by fluorescence in situ hybridization. We also demonstrate that nucleolar dominance, a large-scale epigenetic silencing phenomenon characteristic of allopolyploids, explains the presence of only one Ag-NOR chromosome pair in
T. barrerae. Nucleolar dominance, together with the chromosomal heteromorphism detected in the G-banding pattern and synaptonemal complexes of the species’ diploid-like meiosis, consistently indicates allotetraploidy. Allotetraploidization can coherently explain the peculiarities of gene silencing, cell dimensions, and karyotypic features of
T. barrerae that remain unexplained by assuming diploidy and a large genome size attained by the dispersion of repetitive sequences.</abstract><cop>San Diego, CA</cop><pub>Elsevier Inc</pub><pmid>16580173</pmid><doi>10.1016/j.ygeno.2006.02.010</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Allotetraploidy Animals Biological and medical sciences Cells, Cultured Chromosome Segregation DNA, Ribosomal - metabolism Fundamental and applied biological sciences. Psychology Genes. Genome Genetics of eukaryotes. Biological and molecular evolution In Situ Hybridization, Fluorescence Karyotyping Male Molecular and cellular biology Molecular genetics NORs Nucleolar dominance Polyploidy Red vizcacha rat Repetitive Sequences, Nucleic Acid Rodentia - genetics Rodentia - metabolism Tympanoctomys Tympanoctomys barrerae |
title | Molecular cytogenetics and allotetraploidy in the red vizcacha rat, Tympanoctomys barrerae (Rodentia, Octodontidae) |
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