Phylogeny and age of diversification of the planitibia species group of the Hawaiian Drosophila
The Hawaiian Drosophila offer a unique opportunity to examine evolutionary questions because of the known ages of the Hawaiian Islands and the large number of species endemic to this archipelago. One of the more well studied groups of Hawaiian Drosophila is the planitibia species group, a long-stand...
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creator | Bonacum, James O’Grady, Patrick M. Kambysellis, Michael DeSalle, Rob |
description | The Hawaiian
Drosophila offer a unique opportunity to examine evolutionary questions because of the known ages of the Hawaiian Islands and the large number of species endemic to this archipelago. One of the more well studied groups of Hawaiian
Drosophila is the
planitibia species group, a long-standing population genetic model system. Here we present a molecular phylogenetic hypothesis of all 17 taxa in the
planitibia group based on nucleotide sequences from two mitochondrial (16S and COII) and four nuclear (
Adh,
Gpdh,
Yp1, and
Yp2) loci, accounting for over 4
kb of sequence per taxon. We use these data to estimate major divergence times within this group. Our results suggest that the basal diversification within this group, calculated at 6.1
±
0.47 MY, predates the oldest high island of Kauai. The older diversifications in this group took place on Kauai, with subsequent colonization and speciation events occurring as new islands became available to
Drosophila. Understanding of the phylogenetic relationships of this important group will place the existing population genetic work in a macroevolutionary context and stimulate additional work, particularly on those taxa endemic to the Maui Nui complex of islands. |
doi_str_mv | 10.1016/j.ympev.2005.03.008 |
format | Article |
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Drosophila offer a unique opportunity to examine evolutionary questions because of the known ages of the Hawaiian Islands and the large number of species endemic to this archipelago. One of the more well studied groups of Hawaiian
Drosophila is the
planitibia species group, a long-standing population genetic model system. Here we present a molecular phylogenetic hypothesis of all 17 taxa in the
planitibia group based on nucleotide sequences from two mitochondrial (16S and COII) and four nuclear (
Adh,
Gpdh,
Yp1, and
Yp2) loci, accounting for over 4
kb of sequence per taxon. We use these data to estimate major divergence times within this group. Our results suggest that the basal diversification within this group, calculated at 6.1
±
0.47 MY, predates the oldest high island of Kauai. The older diversifications in this group took place on Kauai, with subsequent colonization and speciation events occurring as new islands became available to
Drosophila. Understanding of the phylogenetic relationships of this important group will place the existing population genetic work in a macroevolutionary context and stimulate additional work, particularly on those taxa endemic to the Maui Nui complex of islands.</description><identifier>ISSN: 1055-7903</identifier><identifier>EISSN: 1095-9513</identifier><identifier>DOI: 10.1016/j.ympev.2005.03.008</identifier><identifier>PMID: 16182150</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Animals ; Biogeography ; Divergence dates ; DNA, Mitochondrial ; Drosophila - classification ; Drosophila - genetics ; Ecology ; Evolution, Molecular ; Gene Frequency ; Genes, Insect ; Genetic Variation ; Genetics, Population ; Geography ; Hawaii ; Hawaiian Drosophila ; Phylogeny ; Planitibia species group ; Species Specificity</subject><ispartof>Molecular phylogenetics and evolution, 2005-10, Vol.37 (1), p.73-82</ispartof><rights>2005 Elsevier Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c423t-f5df11a828c6521a21e23aa050b894aceb7e27ff9fee84bb2f8d268348ae9c8b3</citedby><cites>FETCH-LOGICAL-c423t-f5df11a828c6521a21e23aa050b894aceb7e27ff9fee84bb2f8d268348ae9c8b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.ympev.2005.03.008$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16182150$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bonacum, James</creatorcontrib><creatorcontrib>O’Grady, Patrick M.</creatorcontrib><creatorcontrib>Kambysellis, Michael</creatorcontrib><creatorcontrib>DeSalle, Rob</creatorcontrib><title>Phylogeny and age of diversification of the planitibia species group of the Hawaiian Drosophila</title><title>Molecular phylogenetics and evolution</title><addtitle>Mol Phylogenet Evol</addtitle><description>The Hawaiian
Drosophila offer a unique opportunity to examine evolutionary questions because of the known ages of the Hawaiian Islands and the large number of species endemic to this archipelago. One of the more well studied groups of Hawaiian
Drosophila is the
planitibia species group, a long-standing population genetic model system. Here we present a molecular phylogenetic hypothesis of all 17 taxa in the
planitibia group based on nucleotide sequences from two mitochondrial (16S and COII) and four nuclear (
Adh,
Gpdh,
Yp1, and
Yp2) loci, accounting for over 4
kb of sequence per taxon. We use these data to estimate major divergence times within this group. Our results suggest that the basal diversification within this group, calculated at 6.1
±
0.47 MY, predates the oldest high island of Kauai. The older diversifications in this group took place on Kauai, with subsequent colonization and speciation events occurring as new islands became available to
Drosophila. Understanding of the phylogenetic relationships of this important group will place the existing population genetic work in a macroevolutionary context and stimulate additional work, particularly on those taxa endemic to the Maui Nui complex of islands.</description><subject>Animals</subject><subject>Biogeography</subject><subject>Divergence dates</subject><subject>DNA, Mitochondrial</subject><subject>Drosophila - classification</subject><subject>Drosophila - genetics</subject><subject>Ecology</subject><subject>Evolution, Molecular</subject><subject>Gene Frequency</subject><subject>Genes, Insect</subject><subject>Genetic Variation</subject><subject>Genetics, Population</subject><subject>Geography</subject><subject>Hawaii</subject><subject>Hawaiian Drosophila</subject><subject>Phylogeny</subject><subject>Planitibia species group</subject><subject>Species Specificity</subject><issn>1055-7903</issn><issn>1095-9513</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kE1PwzAMhiMEYjD4BUioJ24t-Wi69MAB8S1NggOcIzd1tkxdU5JuaP-ejg1x42TLfm2_fgi5YDRjlBXXi2yz7HCdcUplRkVGqTogJ4yWMi0lE4fbXMp0UlIxIqcxLihlTJbymIxYwRRnkp4Q_TbfNH6G7SaBtk5ghom3Se3WGKKzzkDvfLst9XNMugZa17vKQRI7NA5jMgt-1f32n-ELnIM2uQ8--m7uGjgjRxaaiOf7OCYfjw_vd8_p9PXp5e52mpqciz61sraMgeLKFJIz4Ay5AKCSVqrMwWA1QT6xtrSIKq8qblXNCyVyBVgaVYkxudrt7YL_XGHs9dJFg83gGP0q6kIVrMhLPgjFTmgGjzGg1V1wSwgbzajectUL_cNVb7lqKvTAdZi63K9fVUus_2b2IAfBzU6Aw5Nrh0HHgU9rsHYBTa9r7_498A14bYwV</recordid><startdate>20051001</startdate><enddate>20051001</enddate><creator>Bonacum, James</creator><creator>O’Grady, Patrick M.</creator><creator>Kambysellis, Michael</creator><creator>DeSalle, Rob</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20051001</creationdate><title>Phylogeny and age of diversification of the planitibia species group of the Hawaiian Drosophila</title><author>Bonacum, James ; O’Grady, Patrick M. ; Kambysellis, Michael ; DeSalle, Rob</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c423t-f5df11a828c6521a21e23aa050b894aceb7e27ff9fee84bb2f8d268348ae9c8b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Animals</topic><topic>Biogeography</topic><topic>Divergence dates</topic><topic>DNA, Mitochondrial</topic><topic>Drosophila - classification</topic><topic>Drosophila - genetics</topic><topic>Ecology</topic><topic>Evolution, Molecular</topic><topic>Gene Frequency</topic><topic>Genes, Insect</topic><topic>Genetic Variation</topic><topic>Genetics, Population</topic><topic>Geography</topic><topic>Hawaii</topic><topic>Hawaiian Drosophila</topic><topic>Phylogeny</topic><topic>Planitibia species group</topic><topic>Species Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bonacum, James</creatorcontrib><creatorcontrib>O’Grady, Patrick M.</creatorcontrib><creatorcontrib>Kambysellis, Michael</creatorcontrib><creatorcontrib>DeSalle, Rob</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular phylogenetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bonacum, James</au><au>O’Grady, Patrick M.</au><au>Kambysellis, Michael</au><au>DeSalle, Rob</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phylogeny and age of diversification of the planitibia species group of the Hawaiian Drosophila</atitle><jtitle>Molecular phylogenetics and evolution</jtitle><addtitle>Mol Phylogenet Evol</addtitle><date>2005-10-01</date><risdate>2005</risdate><volume>37</volume><issue>1</issue><spage>73</spage><epage>82</epage><pages>73-82</pages><issn>1055-7903</issn><eissn>1095-9513</eissn><abstract>The Hawaiian
Drosophila offer a unique opportunity to examine evolutionary questions because of the known ages of the Hawaiian Islands and the large number of species endemic to this archipelago. One of the more well studied groups of Hawaiian
Drosophila is the
planitibia species group, a long-standing population genetic model system. Here we present a molecular phylogenetic hypothesis of all 17 taxa in the
planitibia group based on nucleotide sequences from two mitochondrial (16S and COII) and four nuclear (
Adh,
Gpdh,
Yp1, and
Yp2) loci, accounting for over 4
kb of sequence per taxon. We use these data to estimate major divergence times within this group. Our results suggest that the basal diversification within this group, calculated at 6.1
±
0.47 MY, predates the oldest high island of Kauai. The older diversifications in this group took place on Kauai, with subsequent colonization and speciation events occurring as new islands became available to
Drosophila. Understanding of the phylogenetic relationships of this important group will place the existing population genetic work in a macroevolutionary context and stimulate additional work, particularly on those taxa endemic to the Maui Nui complex of islands.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>16182150</pmid><doi>10.1016/j.ympev.2005.03.008</doi><tpages>10</tpages></addata></record> |
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subjects | Animals Biogeography Divergence dates DNA, Mitochondrial Drosophila - classification Drosophila - genetics Ecology Evolution, Molecular Gene Frequency Genes, Insect Genetic Variation Genetics, Population Geography Hawaii Hawaiian Drosophila Phylogeny Planitibia species group Species Specificity |
title | Phylogeny and age of diversification of the planitibia species group of the Hawaiian Drosophila |
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