Thermovirga lienii gen. nov., sp. nov., a novel moderately thermophilic, anaerobic, amino-acid-degrading bacterium isolated from a North Sea oil well
Department of Biology, University of Bergen, PO Box 7800, N-5020 Bergen, Norway Correspondence Nils-Kåre Birkeland nils.birkeland{at}bio.uib.no A novel anaerobic, moderately thermophilic bacterium, strain Cas60314 T , was isolated from hot oil-well production water obtained from an oil reservoir in...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2006-07, Vol.56 (7), p.1539-1545 |
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| creator | Dahle, Hakon Birkeland, Nils-Kare |
| description | Department of Biology, University of Bergen, PO Box 7800, N-5020 Bergen, Norway
Correspondence Nils-Kåre Birkeland nils.birkeland{at}bio.uib.no
A novel anaerobic, moderately thermophilic bacterium, strain Cas60314 T , was isolated from hot oil-well production water obtained from an oil reservoir in the North Sea. The cells were Gram-negative, motile, straight rods. The salinity and pH growth optima were 2.03.0 % NaCl and 6.57.0, respectively. The optimum temperature was 58 °C. Strain Cas60314 T had a fermentative type of metabolism and utilized proteinous substrates, some single amino acids and a limited number of organic acids, but not sugars, fatty acids or alcohols. Cystine and elemental sulfur were reduced to sulfide. The G+C content of the DNA was 46.6 mol%. On the basis of phenotypic and phylogenetic features, it is proposed that this isolate represents a novel genus and species with the name Thermovirga lienii gen. nov., sp. nov. within the family Syntrophomonadaceae . The proposed type strain is strain Cas60314 T (=DSM 17291 T =ATTC BAA-1197 T ).
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain DSM 17291 T is DQ071273 .
The morphology and growth temperature profile of Thermovirga lienii gen. nov., sp. nov. are shown in supplementary figures available in IJSEM Online. |
| doi_str_mv | 10.1099/ijs.0.63894-0 |
| format | Article |
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Correspondence Nils-Kåre Birkeland nils.birkeland{at}bio.uib.no
A novel anaerobic, moderately thermophilic bacterium, strain Cas60314 T , was isolated from hot oil-well production water obtained from an oil reservoir in the North Sea. The cells were Gram-negative, motile, straight rods. The salinity and pH growth optima were 2.03.0 % NaCl and 6.57.0, respectively. The optimum temperature was 58 °C. Strain Cas60314 T had a fermentative type of metabolism and utilized proteinous substrates, some single amino acids and a limited number of organic acids, but not sugars, fatty acids or alcohols. Cystine and elemental sulfur were reduced to sulfide. The G+C content of the DNA was 46.6 mol%. On the basis of phenotypic and phylogenetic features, it is proposed that this isolate represents a novel genus and species with the name Thermovirga lienii gen. nov., sp. nov. within the family Syntrophomonadaceae . The proposed type strain is strain Cas60314 T (=DSM 17291 T =ATTC BAA-1197 T ).
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain DSM 17291 T is DQ071273 .
The morphology and growth temperature profile of Thermovirga lienii gen. nov., sp. nov. are shown in supplementary figures available in IJSEM Online.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.63894-0</identifier><identifier>PMID: 16825627</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Alcohols - metabolism ; Amino Acids - metabolism ; Bacteria ; Bacteriology ; Base Composition ; Biological and medical sciences ; Biology of microorganisms of confirmed or potential industrial interest ; Biotechnology ; Carbohydrate Metabolism ; Carboxylic Acids - metabolism ; Cysteine - metabolism ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; DNA, Ribosomal - chemistry ; DNA, Ribosomal - genetics ; Fatty Acids - metabolism ; Fermentation ; Fundamental and applied biological sciences. Psychology ; Genes, rRNA ; Gentian Violet ; Gram-Positive Bacteria - classification ; Gram-Positive Bacteria - cytology ; Gram-Positive Bacteria - isolation & purification ; Gram-Positive Bacteria - physiology ; Growth Inhibitors - pharmacology ; Hydrogen-Ion Concentration ; Isolation and description ; Microbiology ; Mission oriented research ; Molecular Sequence Data ; Movement ; North Sea ; Oxidation-Reduction ; Petroleum ; Phenazines ; Phylogeny ; Proteins - metabolism ; RNA, Bacterial - genetics ; RNA, Ribosomal, 16S - genetics ; Seawater - microbiology ; Sequence Analysis, DNA ; Sodium Chloride - pharmacology ; Sulfur - metabolism ; Systematics ; Temperature ; Thermovirga lienii</subject><ispartof>International journal of systematic and evolutionary microbiology, 2006-07, Vol.56 (7), p.1539-1545</ispartof><rights>2006 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c490t-146c8d4f2cd909208366a17810be68a0dde0b8f80913aa2ea155ede4e5a3789e3</citedby><cites>FETCH-LOGICAL-c490t-146c8d4f2cd909208366a17810be68a0dde0b8f80913aa2ea155ede4e5a3789e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3744,3745,27922,27923</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17965400$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16825627$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Dahle, Hakon</creatorcontrib><creatorcontrib>Birkeland, Nils-Kare</creatorcontrib><title>Thermovirga lienii gen. nov., sp. nov., a novel moderately thermophilic, anaerobic, amino-acid-degrading bacterium isolated from a North Sea oil well</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>Department of Biology, University of Bergen, PO Box 7800, N-5020 Bergen, Norway
Correspondence Nils-Kåre Birkeland nils.birkeland{at}bio.uib.no
A novel anaerobic, moderately thermophilic bacterium, strain Cas60314 T , was isolated from hot oil-well production water obtained from an oil reservoir in the North Sea. The cells were Gram-negative, motile, straight rods. The salinity and pH growth optima were 2.03.0 % NaCl and 6.57.0, respectively. The optimum temperature was 58 °C. Strain Cas60314 T had a fermentative type of metabolism and utilized proteinous substrates, some single amino acids and a limited number of organic acids, but not sugars, fatty acids or alcohols. Cystine and elemental sulfur were reduced to sulfide. The G+C content of the DNA was 46.6 mol%. On the basis of phenotypic and phylogenetic features, it is proposed that this isolate represents a novel genus and species with the name Thermovirga lienii gen. nov., sp. nov. within the family Syntrophomonadaceae . The proposed type strain is strain Cas60314 T (=DSM 17291 T =ATTC BAA-1197 T ).
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain DSM 17291 T is DQ071273 .
The morphology and growth temperature profile of Thermovirga lienii gen. nov., sp. nov. are shown in supplementary figures available in IJSEM Online.</description><subject>Alcohols - metabolism</subject><subject>Amino Acids - metabolism</subject><subject>Bacteria</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>Biology of microorganisms of confirmed or potential industrial interest</subject><subject>Biotechnology</subject><subject>Carbohydrate Metabolism</subject><subject>Carboxylic Acids - metabolism</subject><subject>Cysteine - metabolism</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA, Ribosomal - chemistry</subject><subject>DNA, Ribosomal - genetics</subject><subject>Fatty Acids - metabolism</subject><subject>Fermentation</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes, rRNA</subject><subject>Gentian Violet</subject><subject>Gram-Positive Bacteria - classification</subject><subject>Gram-Positive Bacteria - cytology</subject><subject>Gram-Positive Bacteria - isolation & purification</subject><subject>Gram-Positive Bacteria - physiology</subject><subject>Growth Inhibitors - pharmacology</subject><subject>Hydrogen-Ion Concentration</subject><subject>Isolation and description</subject><subject>Microbiology</subject><subject>Mission oriented research</subject><subject>Molecular Sequence Data</subject><subject>Movement</subject><subject>North Sea</subject><subject>Oxidation-Reduction</subject><subject>Petroleum</subject><subject>Phenazines</subject><subject>Phylogeny</subject><subject>Proteins - metabolism</subject><subject>RNA, Bacterial - genetics</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Seawater - microbiology</subject><subject>Sequence Analysis, DNA</subject><subject>Sodium Chloride - pharmacology</subject><subject>Sulfur - metabolism</subject><subject>Systematics</subject><subject>Temperature</subject><subject>Thermovirga lienii</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUtv1DAURiMEoqWwZIu8AbEg4ToPx16iipdUwYKytm7sm8RVEg92plV_CP8XZ2agS1b3k3X8-XGy7CWHgoNS791NLKAQlVR1Do-yc14LkTdQ1Y__5VKcZc9ivAFICwBPszMuZNmIsj3Pfl-PFGZ_68KAbHK0OMcGWgq2-NviHYu7vwm3SRObvaWAK033bD1s3Y1uciYBC1Lw3SHObvE5GmdzS0NA65aBdWhWCm4_Mxf9lBos64OfU_E3H9aR_SBk3k3sjqbpefakxynSi9O8yH5--nh9-SW_-v756-WHq9zUCtY8PcdIW_elsQpUCbISAnkrOXQkJIK1BJ3sJSheIZaEvGnIUk0NVq1UVF1kb469u-B_7SmuenbRpAvgQn4ftZCCN-mr_gty1bZtXYoE5kfQBB9joF7vgpsx3GsOehOmkzAN-iBMQ-JfnYr33Uz2gT4ZSsDrE4DR4NQHXIyLD1yrRFPDVvT2yI1uGO9cIJ00zs5sSvx2aCN0q3lTqeoP32CtcQ</recordid><startdate>20060701</startdate><enddate>20060701</enddate><creator>Dahle, Hakon</creator><creator>Birkeland, Nils-Kare</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20060701</creationdate><title>Thermovirga lienii gen. nov., sp. nov., a novel moderately thermophilic, anaerobic, amino-acid-degrading bacterium isolated from a North Sea oil well</title><author>Dahle, Hakon ; Birkeland, Nils-Kare</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c490t-146c8d4f2cd909208366a17810be68a0dde0b8f80913aa2ea155ede4e5a3789e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Alcohols - metabolism</topic><topic>Amino Acids - metabolism</topic><topic>Bacteria</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>Biology of microorganisms of confirmed or potential industrial interest</topic><topic>Biotechnology</topic><topic>Carbohydrate Metabolism</topic><topic>Carboxylic Acids - metabolism</topic><topic>Cysteine - metabolism</topic><topic>DNA, Bacterial - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA, Ribosomal - chemistry</topic><topic>DNA, Ribosomal - genetics</topic><topic>Fatty Acids - metabolism</topic><topic>Fermentation</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes, rRNA</topic><topic>Gentian Violet</topic><topic>Gram-Positive Bacteria - classification</topic><topic>Gram-Positive Bacteria - cytology</topic><topic>Gram-Positive Bacteria - isolation & purification</topic><topic>Gram-Positive Bacteria - physiology</topic><topic>Growth Inhibitors - pharmacology</topic><topic>Hydrogen-Ion Concentration</topic><topic>Isolation and description</topic><topic>Microbiology</topic><topic>Mission oriented research</topic><topic>Molecular Sequence Data</topic><topic>Movement</topic><topic>North Sea</topic><topic>Oxidation-Reduction</topic><topic>Petroleum</topic><topic>Phenazines</topic><topic>Phylogeny</topic><topic>Proteins - metabolism</topic><topic>RNA, Bacterial - genetics</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Seawater - microbiology</topic><topic>Sequence Analysis, DNA</topic><topic>Sodium Chloride - pharmacology</topic><topic>Sulfur - metabolism</topic><topic>Systematics</topic><topic>Temperature</topic><topic>Thermovirga lienii</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dahle, Hakon</creatorcontrib><creatorcontrib>Birkeland, Nils-Kare</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dahle, Hakon</au><au>Birkeland, Nils-Kare</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Thermovirga lienii gen. nov., sp. nov., a novel moderately thermophilic, anaerobic, amino-acid-degrading bacterium isolated from a North Sea oil well</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2006-07-01</date><risdate>2006</risdate><volume>56</volume><issue>7</issue><spage>1539</spage><epage>1545</epage><pages>1539-1545</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>Department of Biology, University of Bergen, PO Box 7800, N-5020 Bergen, Norway
Correspondence Nils-Kåre Birkeland nils.birkeland{at}bio.uib.no
A novel anaerobic, moderately thermophilic bacterium, strain Cas60314 T , was isolated from hot oil-well production water obtained from an oil reservoir in the North Sea. The cells were Gram-negative, motile, straight rods. The salinity and pH growth optima were 2.03.0 % NaCl and 6.57.0, respectively. The optimum temperature was 58 °C. Strain Cas60314 T had a fermentative type of metabolism and utilized proteinous substrates, some single amino acids and a limited number of organic acids, but not sugars, fatty acids or alcohols. Cystine and elemental sulfur were reduced to sulfide. The G+C content of the DNA was 46.6 mol%. On the basis of phenotypic and phylogenetic features, it is proposed that this isolate represents a novel genus and species with the name Thermovirga lienii gen. nov., sp. nov. within the family Syntrophomonadaceae . The proposed type strain is strain Cas60314 T (=DSM 17291 T =ATTC BAA-1197 T ).
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain DSM 17291 T is DQ071273 .
The morphology and growth temperature profile of Thermovirga lienii gen. nov., sp. nov. are shown in supplementary figures available in IJSEM Online.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>16825627</pmid><doi>10.1099/ijs.0.63894-0</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | International journal of systematic and evolutionary microbiology, 2006-07, Vol.56 (7), p.1539-1545 |
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| source | MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection |
| subjects | Alcohols - metabolism Amino Acids - metabolism Bacteria Bacteriology Base Composition Biological and medical sciences Biology of microorganisms of confirmed or potential industrial interest Biotechnology Carbohydrate Metabolism Carboxylic Acids - metabolism Cysteine - metabolism DNA, Bacterial - chemistry DNA, Bacterial - genetics DNA, Ribosomal - chemistry DNA, Ribosomal - genetics Fatty Acids - metabolism Fermentation Fundamental and applied biological sciences. Psychology Genes, rRNA Gentian Violet Gram-Positive Bacteria - classification Gram-Positive Bacteria - cytology Gram-Positive Bacteria - isolation & purification Gram-Positive Bacteria - physiology Growth Inhibitors - pharmacology Hydrogen-Ion Concentration Isolation and description Microbiology Mission oriented research Molecular Sequence Data Movement North Sea Oxidation-Reduction Petroleum Phenazines Phylogeny Proteins - metabolism RNA, Bacterial - genetics RNA, Ribosomal, 16S - genetics Seawater - microbiology Sequence Analysis, DNA Sodium Chloride - pharmacology Sulfur - metabolism Systematics Temperature Thermovirga lienii |
| title | Thermovirga lienii gen. nov., sp. nov., a novel moderately thermophilic, anaerobic, amino-acid-degrading bacterium isolated from a North Sea oil well |
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