Genome-wide search for sarcoidosis susceptibility genes in African Americans
Sarcoidosis, a systemic granulomatous disease of unknown etiology, likely results from an environmental insult in a genetically susceptible host. In the US, African Americans are more commonly affected with sarcoidosis and suffer greater morbidity than Caucasians. We searched for sarcoidosis suscept...
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Veröffentlicht in: | Genes and immunity 2005-09, Vol.6 (6), p.509-518 |
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creator | Iannuzzi, M C Iyengar, S K Gray-McGuire, C Elston, R C Baughman, R P Donohue, J F Hirst, K Judson, M A Kavuru, M S Maliarik, M J Moller, D R Newman, L S Rabin, D L Rose, C S Rossman, M D Teirstein, A S Rybicki, B A |
description | Sarcoidosis, a systemic granulomatous disease of unknown etiology, likely results from an environmental insult in a genetically susceptible host. In the US, African Americans are more commonly affected with sarcoidosis and suffer greater morbidity than Caucasians. We searched for sarcoidosis susceptibility loci by conducting a genome-wide, sib pair multipoint linkage analysis in 229 African-American families ascertained through two or more sibs with a history of sarcoidosis. Using the Haseman–Elston regression technique, linkage peaks with
P
-values less than 0.05 were identified on chromosomes 1p22, 2p25, 5p15-13, 5q11, 5q35, 9q34, 11p15 and 20q13 with the most prominent peak at D5S2500 on chromosome 5q11 (
P
=0.0005). We found agreement for linkage with the previously reported genome scan of a German population at chromosomes 1p and 9q. Based on the multiple suggestive regions for linkage found in our study population, it is likely that more than one gene influences sarcoidosis susceptibility in African Americans. Fine mapping of the linked regions, particularly on chromosome 5q, should help to refine linkage signals and guide further sarcoidosis candidate gene investigation. |
doi_str_mv | 10.1038/sj.gene.6364235 |
format | Article |
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P
-values less than 0.05 were identified on chromosomes 1p22, 2p25, 5p15-13, 5q11, 5q35, 9q34, 11p15 and 20q13 with the most prominent peak at D5S2500 on chromosome 5q11 (
P
=0.0005). We found agreement for linkage with the previously reported genome scan of a German population at chromosomes 1p and 9q. Based on the multiple suggestive regions for linkage found in our study population, it is likely that more than one gene influences sarcoidosis susceptibility in African Americans. Fine mapping of the linked regions, particularly on chromosome 5q, should help to refine linkage signals and guide further sarcoidosis candidate gene investigation.</description><identifier>ISSN: 1466-4879</identifier><identifier>EISSN: 1476-5470</identifier><identifier>DOI: 10.1038/sj.gene.6364235</identifier><identifier>PMID: 15951742</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>African Americans ; African Americans - genetics ; Biomedical and Life Sciences ; Biomedicine ; Cancer Research ; Cardiomyopathies - ethnology ; Cardiomyopathies - genetics ; Chromosome 5 ; Chromosomes ; Chromosomes, Human ; Critical care ; Disease ; Disease susceptibility ; Epidemiology ; Etiology ; full-paper ; Gene Expression ; Gene mapping ; Genes ; Genetic aspects ; Genetic Linkage ; Genetic Predisposition to Disease ; Genetic Testing ; Genome, Human ; Genomes ; Health aspects ; Human Genetics ; Humans ; Immunology ; Linkage (Genetics) ; Linkage analysis ; Medicine ; Morbidity ; Nuclear family ; Population studies ; Risk factors ; Sarcoidosis ; Sarcoidosis - ethnology ; Sarcoidosis - genetics ; White people</subject><ispartof>Genes and immunity, 2005-09, Vol.6 (6), p.509-518</ispartof><rights>Springer Nature Limited 2005</rights><rights>COPYRIGHT 2005 Nature Publishing Group</rights><rights>Copyright Nature Publishing Group Sep 2005</rights><rights>Nature Publishing Group 2005.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c618t-6bd07dc09dbb49f8b27cb744ae275301f96fd98c00612f43d6824d7d19c627633</citedby><cites>FETCH-LOGICAL-c618t-6bd07dc09dbb49f8b27cb744ae275301f96fd98c00612f43d6824d7d19c627633</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/sj.gene.6364235$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/sj.gene.6364235$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15951742$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Iannuzzi, M C</creatorcontrib><creatorcontrib>Iyengar, S K</creatorcontrib><creatorcontrib>Gray-McGuire, C</creatorcontrib><creatorcontrib>Elston, R C</creatorcontrib><creatorcontrib>Baughman, R P</creatorcontrib><creatorcontrib>Donohue, J F</creatorcontrib><creatorcontrib>Hirst, K</creatorcontrib><creatorcontrib>Judson, M A</creatorcontrib><creatorcontrib>Kavuru, M S</creatorcontrib><creatorcontrib>Maliarik, M J</creatorcontrib><creatorcontrib>Moller, D R</creatorcontrib><creatorcontrib>Newman, L S</creatorcontrib><creatorcontrib>Rabin, D L</creatorcontrib><creatorcontrib>Rose, C S</creatorcontrib><creatorcontrib>Rossman, M D</creatorcontrib><creatorcontrib>Teirstein, A S</creatorcontrib><creatorcontrib>Rybicki, B A</creatorcontrib><title>Genome-wide search for sarcoidosis susceptibility genes in African Americans</title><title>Genes and immunity</title><addtitle>Genes Immun</addtitle><addtitle>Genes Immun</addtitle><description>Sarcoidosis, a systemic granulomatous disease of unknown etiology, likely results from an environmental insult in a genetically susceptible host. In the US, African Americans are more commonly affected with sarcoidosis and suffer greater morbidity than Caucasians. We searched for sarcoidosis susceptibility loci by conducting a genome-wide, sib pair multipoint linkage analysis in 229 African-American families ascertained through two or more sibs with a history of sarcoidosis. Using the Haseman–Elston regression technique, linkage peaks with
P
-values less than 0.05 were identified on chromosomes 1p22, 2p25, 5p15-13, 5q11, 5q35, 9q34, 11p15 and 20q13 with the most prominent peak at D5S2500 on chromosome 5q11 (
P
=0.0005). We found agreement for linkage with the previously reported genome scan of a German population at chromosomes 1p and 9q. Based on the multiple suggestive regions for linkage found in our study population, it is likely that more than one gene influences sarcoidosis susceptibility in African Americans. Fine mapping of the linked regions, particularly on chromosome 5q, should help to refine linkage signals and guide further sarcoidosis candidate gene investigation.</description><subject>African Americans</subject><subject>African Americans - genetics</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Cancer Research</subject><subject>Cardiomyopathies - ethnology</subject><subject>Cardiomyopathies - genetics</subject><subject>Chromosome 5</subject><subject>Chromosomes</subject><subject>Chromosomes, Human</subject><subject>Critical care</subject><subject>Disease</subject><subject>Disease susceptibility</subject><subject>Epidemiology</subject><subject>Etiology</subject><subject>full-paper</subject><subject>Gene Expression</subject><subject>Gene mapping</subject><subject>Genes</subject><subject>Genetic aspects</subject><subject>Genetic Linkage</subject><subject>Genetic Predisposition to Disease</subject><subject>Genetic Testing</subject><subject>Genome, Human</subject><subject>Genomes</subject><subject>Health aspects</subject><subject>Human Genetics</subject><subject>Humans</subject><subject>Immunology</subject><subject>Linkage (Genetics)</subject><subject>Linkage analysis</subject><subject>Medicine</subject><subject>Morbidity</subject><subject>Nuclear family</subject><subject>Population studies</subject><subject>Risk factors</subject><subject>Sarcoidosis</subject><subject>Sarcoidosis - 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Academic</collection><jtitle>Genes and immunity</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Iannuzzi, M C</au><au>Iyengar, S K</au><au>Gray-McGuire, C</au><au>Elston, R C</au><au>Baughman, R P</au><au>Donohue, J F</au><au>Hirst, K</au><au>Judson, M A</au><au>Kavuru, M S</au><au>Maliarik, M J</au><au>Moller, D R</au><au>Newman, L S</au><au>Rabin, D L</au><au>Rose, C S</au><au>Rossman, M D</au><au>Teirstein, A S</au><au>Rybicki, B A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genome-wide search for sarcoidosis susceptibility genes in African Americans</atitle><jtitle>Genes and immunity</jtitle><stitle>Genes Immun</stitle><addtitle>Genes Immun</addtitle><date>2005-09-01</date><risdate>2005</risdate><volume>6</volume><issue>6</issue><spage>509</spage><epage>518</epage><pages>509-518</pages><issn>1466-4879</issn><eissn>1476-5470</eissn><abstract>Sarcoidosis, a systemic granulomatous disease of unknown etiology, likely results from an environmental insult in a genetically susceptible host. In the US, African Americans are more commonly affected with sarcoidosis and suffer greater morbidity than Caucasians. We searched for sarcoidosis susceptibility loci by conducting a genome-wide, sib pair multipoint linkage analysis in 229 African-American families ascertained through two or more sibs with a history of sarcoidosis. Using the Haseman–Elston regression technique, linkage peaks with
P
-values less than 0.05 were identified on chromosomes 1p22, 2p25, 5p15-13, 5q11, 5q35, 9q34, 11p15 and 20q13 with the most prominent peak at D5S2500 on chromosome 5q11 (
P
=0.0005). We found agreement for linkage with the previously reported genome scan of a German population at chromosomes 1p and 9q. Based on the multiple suggestive regions for linkage found in our study population, it is likely that more than one gene influences sarcoidosis susceptibility in African Americans. Fine mapping of the linked regions, particularly on chromosome 5q, should help to refine linkage signals and guide further sarcoidosis candidate gene investigation.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>15951742</pmid><doi>10.1038/sj.gene.6364235</doi><tpages>10</tpages></addata></record> |
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subjects | African Americans African Americans - genetics Biomedical and Life Sciences Biomedicine Cancer Research Cardiomyopathies - ethnology Cardiomyopathies - genetics Chromosome 5 Chromosomes Chromosomes, Human Critical care Disease Disease susceptibility Epidemiology Etiology full-paper Gene Expression Gene mapping Genes Genetic aspects Genetic Linkage Genetic Predisposition to Disease Genetic Testing Genome, Human Genomes Health aspects Human Genetics Humans Immunology Linkage (Genetics) Linkage analysis Medicine Morbidity Nuclear family Population studies Risk factors Sarcoidosis Sarcoidosis - ethnology Sarcoidosis - genetics White people |
title | Genome-wide search for sarcoidosis susceptibility genes in African Americans |
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