Transcription Regulatory Complex Including YB-1 Controls Expression of Mouse Matrix Metalloproteinase-2 Gene in NIH3T3 Cells
Matrix metalloproteinase 2 (MMP-2) is a metalloproteinase belonging to a family of structurally related zinc-dependent endopeptidases capable of degrading extracellular matrix components. To elucidate the functional promoter of the mouse MMP-2 gene, systematic transient expression analysis of the 5′...
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Veröffentlicht in: | Biological & Pharmaceutical Bulletin 2005, Vol.28(8), pp.1500-1504 |
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description | Matrix metalloproteinase 2 (MMP-2) is a metalloproteinase belonging to a family of structurally related zinc-dependent endopeptidases capable of degrading extracellular matrix components. To elucidate the functional promoter of the mouse MMP-2 gene, systematic transient expression analysis of the 5′-flanking region of the MMP-2 gene was performed using serially nested deletions. The deletion analysis indicated that the proximal 327-bp sequence from nucleotide positions −313 to +14 relative to the transcription start site is essential for minimal promoter activity and that a 10-bp sequence of the promoter at positions −939 to −930 is required for high expression level of the MMP-2 gene. The 10-bp fragment functioned as a potent stimulator of heterologous SV40 promoter activity. This element is identical to the YB-1 binding motif (Y-box) present within the responsive element-1 (RE-1), which has been shown to act as a potent cis-activator of transcription of the rat MMP-2 gene. The binding of a nuclear factor(s) to the 10-bp fragment was also revealed by electrophoretic mobility shift assays (EMSAs). Antibody-supershift EMSAs of nuclear extracts from NIH 3T3 cells demonstrated YB-1 binding to the RE-1 sequence. It was concluded that the RE-1 is the conserved element for potent expression of MMP-2 gene among rodents. |
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To elucidate the functional promoter of the mouse MMP-2 gene, systematic transient expression analysis of the 5′-flanking region of the MMP-2 gene was performed using serially nested deletions. The deletion analysis indicated that the proximal 327-bp sequence from nucleotide positions −313 to +14 relative to the transcription start site is essential for minimal promoter activity and that a 10-bp sequence of the promoter at positions −939 to −930 is required for high expression level of the MMP-2 gene. The 10-bp fragment functioned as a potent stimulator of heterologous SV40 promoter activity. This element is identical to the YB-1 binding motif (Y-box) present within the responsive element-1 (RE-1), which has been shown to act as a potent cis-activator of transcription of the rat MMP-2 gene. The binding of a nuclear factor(s) to the 10-bp fragment was also revealed by electrophoretic mobility shift assays (EMSAs). Antibody-supershift EMSAs of nuclear extracts from NIH 3T3 cells demonstrated YB-1 binding to the RE-1 sequence. It was concluded that the RE-1 is the conserved element for potent expression of MMP-2 gene among rodents.</description><identifier>ISSN: 0918-6158</identifier><identifier>EISSN: 1347-5215</identifier><identifier>DOI: 10.1248/bpb.28.1500</identifier><identifier>PMID: 16079501</identifier><language>eng</language><publisher>Japan: The Pharmaceutical Society of Japan</publisher><subject>3T3 Cells ; Animals ; Base Sequence ; DNA ; Electrophoretic Mobility Shift Assay ; luciferase assay ; matrix metalloproteinase 2 (MMP-2) ; Matrix Metalloproteinase 2 - genetics ; Matrix Metalloproteinase 2 - physiology ; Mice ; Molecular Sequence Data ; promoter ; Regulatory Sequences, Nucleic Acid ; Sequence Homology, Amino Acid ; Simian virus 40 ; transcription ; Transcription Factors - physiology ; Transcription, Genetic - genetics ; Transcription, Genetic - physiology</subject><ispartof>Biological and Pharmaceutical Bulletin, 2005, Vol.28(8), pp.1500-1504</ispartof><rights>2005 The Pharmaceutical Society of Japan</rights><rights>Copyright Japan Science and Technology Agency 2005</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c764t-ba822f346f56d712f8511b0f622e24024581e69102e6ce8c2554e74cb448f9413</citedby><cites>FETCH-LOGICAL-c764t-ba822f346f56d712f8511b0f622e24024581e69102e6ce8c2554e74cb448f9413</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,1877,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16079501$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Matsumoto, Ken-ichi</creatorcontrib><creatorcontrib>Abiko, Shun</creatorcontrib><creatorcontrib>Ariga, Hiroyoshi</creatorcontrib><creatorcontrib>Graduate School of Pharmaceutical Sciences</creatorcontrib><creatorcontrib>Department of Molecular Biology</creatorcontrib><creatorcontrib>Hokkaido University</creatorcontrib><title>Transcription Regulatory Complex Including YB-1 Controls Expression of Mouse Matrix Metalloproteinase-2 Gene in NIH3T3 Cells</title><title>Biological & Pharmaceutical Bulletin</title><addtitle>Biol Pharm Bull</addtitle><description>Matrix metalloproteinase 2 (MMP-2) is a metalloproteinase belonging to a family of structurally related zinc-dependent endopeptidases capable of degrading extracellular matrix components. To elucidate the functional promoter of the mouse MMP-2 gene, systematic transient expression analysis of the 5′-flanking region of the MMP-2 gene was performed using serially nested deletions. The deletion analysis indicated that the proximal 327-bp sequence from nucleotide positions −313 to +14 relative to the transcription start site is essential for minimal promoter activity and that a 10-bp sequence of the promoter at positions −939 to −930 is required for high expression level of the MMP-2 gene. The 10-bp fragment functioned as a potent stimulator of heterologous SV40 promoter activity. This element is identical to the YB-1 binding motif (Y-box) present within the responsive element-1 (RE-1), which has been shown to act as a potent cis-activator of transcription of the rat MMP-2 gene. The binding of a nuclear factor(s) to the 10-bp fragment was also revealed by electrophoretic mobility shift assays (EMSAs). Antibody-supershift EMSAs of nuclear extracts from NIH 3T3 cells demonstrated YB-1 binding to the RE-1 sequence. It was concluded that the RE-1 is the conserved element for potent expression of MMP-2 gene among rodents.</description><subject>3T3 Cells</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>DNA</subject><subject>Electrophoretic Mobility Shift Assay</subject><subject>luciferase assay</subject><subject>matrix metalloproteinase 2 (MMP-2)</subject><subject>Matrix Metalloproteinase 2 - genetics</subject><subject>Matrix Metalloproteinase 2 - physiology</subject><subject>Mice</subject><subject>Molecular Sequence Data</subject><subject>promoter</subject><subject>Regulatory Sequences, Nucleic Acid</subject><subject>Sequence Homology, Amino Acid</subject><subject>Simian virus 40</subject><subject>transcription</subject><subject>Transcription Factors - physiology</subject><subject>Transcription, Genetic - genetics</subject><subject>Transcription, Genetic - physiology</subject><issn>0918-6158</issn><issn>1347-5215</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcGLEzEUxgdR3Lp68i4BwYtMTTJJJnNTy9otbBWkHjyFTPqmpqTJbDIDXfCPN7PtuuDFywvk_d73vsdXFK8JnhPK5Ie2b-dUzgnH-EkxIxWrS04Jf1rMcENkKQiXF8WLlPYY4xrT6nlxQQSuG47JrPi9idonE20_2ODRd9iNTg8h3qFFOPQOjmjljRu31u_Qz88lyd9-iMEldHXsI6Q0TYUOrcOYAK31EO0RrWHQzoU-hgGs1wlKipbgAVmPvq6uq02FFuBcelk867RL8Or8XhY_vlxtFtflzbflavHppjS1YEPZaklpVzHRcbGtCe0kJ6TFnaAUKMOUcUlANARTEAakoZwzqJlpGZNdw0h1Wbw76WZHtyOkQR1sMtmB9pB9KyEZExjz_4KUkIZz2mTw7T_gPozR5yMUYaypGBUVy9T7E2ViSClCp_poDzreKYLVlJ3K2Skq1ZRdpt-cNcf2ANtH9hxWBpYnIHet0S54Zz08bjapbm1wQdF8i8KYSiwVrsi9_FQYwTXnzbTq40lpnwa9g7-rdByscfBgS57K_fhDy_zSUYGv_gA0isAj</recordid><startdate>20050801</startdate><enddate>20050801</enddate><creator>Matsumoto, Ken-ichi</creator><creator>Abiko, Shun</creator><creator>Ariga, Hiroyoshi</creator><general>The Pharmaceutical Society of Japan</general><general>Pharmaceutical Society of Japan</general><general>Japan Science and Technology Agency</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7U9</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20050801</creationdate><title>Transcription Regulatory Complex Including YB-1 Controls Expression of Mouse Matrix Metalloproteinase-2 Gene in NIH3T3 Cells</title><author>Matsumoto, Ken-ichi ; Abiko, Shun ; Ariga, Hiroyoshi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c764t-ba822f346f56d712f8511b0f622e24024581e69102e6ce8c2554e74cb448f9413</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>3T3 Cells</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>DNA</topic><topic>Electrophoretic Mobility Shift Assay</topic><topic>luciferase assay</topic><topic>matrix metalloproteinase 2 (MMP-2)</topic><topic>Matrix Metalloproteinase 2 - genetics</topic><topic>Matrix Metalloproteinase 2 - physiology</topic><topic>Mice</topic><topic>Molecular Sequence Data</topic><topic>promoter</topic><topic>Regulatory Sequences, Nucleic Acid</topic><topic>Sequence Homology, Amino Acid</topic><topic>Simian virus 40</topic><topic>transcription</topic><topic>Transcription Factors - physiology</topic><topic>Transcription, Genetic - genetics</topic><topic>Transcription, Genetic - physiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Matsumoto, Ken-ichi</creatorcontrib><creatorcontrib>Abiko, Shun</creatorcontrib><creatorcontrib>Ariga, Hiroyoshi</creatorcontrib><creatorcontrib>Graduate School of Pharmaceutical Sciences</creatorcontrib><creatorcontrib>Department of Molecular Biology</creatorcontrib><creatorcontrib>Hokkaido University</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Biological & Pharmaceutical Bulletin</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Matsumoto, Ken-ichi</au><au>Abiko, Shun</au><au>Ariga, Hiroyoshi</au><aucorp>Graduate School of Pharmaceutical Sciences</aucorp><aucorp>Department of Molecular Biology</aucorp><aucorp>Hokkaido University</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Transcription Regulatory Complex Including YB-1 Controls Expression of Mouse Matrix Metalloproteinase-2 Gene in NIH3T3 Cells</atitle><jtitle>Biological & Pharmaceutical Bulletin</jtitle><addtitle>Biol Pharm Bull</addtitle><date>2005-08-01</date><risdate>2005</risdate><volume>28</volume><issue>8</issue><spage>1500</spage><epage>1504</epage><pages>1500-1504</pages><issn>0918-6158</issn><eissn>1347-5215</eissn><abstract>Matrix metalloproteinase 2 (MMP-2) is a metalloproteinase belonging to a family of structurally related zinc-dependent endopeptidases capable of degrading extracellular matrix components. To elucidate the functional promoter of the mouse MMP-2 gene, systematic transient expression analysis of the 5′-flanking region of the MMP-2 gene was performed using serially nested deletions. The deletion analysis indicated that the proximal 327-bp sequence from nucleotide positions −313 to +14 relative to the transcription start site is essential for minimal promoter activity and that a 10-bp sequence of the promoter at positions −939 to −930 is required for high expression level of the MMP-2 gene. The 10-bp fragment functioned as a potent stimulator of heterologous SV40 promoter activity. This element is identical to the YB-1 binding motif (Y-box) present within the responsive element-1 (RE-1), which has been shown to act as a potent cis-activator of transcription of the rat MMP-2 gene. The binding of a nuclear factor(s) to the 10-bp fragment was also revealed by electrophoretic mobility shift assays (EMSAs). Antibody-supershift EMSAs of nuclear extracts from NIH 3T3 cells demonstrated YB-1 binding to the RE-1 sequence. It was concluded that the RE-1 is the conserved element for potent expression of MMP-2 gene among rodents.</abstract><cop>Japan</cop><pub>The Pharmaceutical Society of Japan</pub><pmid>16079501</pmid><doi>10.1248/bpb.28.1500</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 3T3 Cells Animals Base Sequence DNA Electrophoretic Mobility Shift Assay luciferase assay matrix metalloproteinase 2 (MMP-2) Matrix Metalloproteinase 2 - genetics Matrix Metalloproteinase 2 - physiology Mice Molecular Sequence Data promoter Regulatory Sequences, Nucleic Acid Sequence Homology, Amino Acid Simian virus 40 transcription Transcription Factors - physiology Transcription, Genetic - genetics Transcription, Genetic - physiology |
title | Transcription Regulatory Complex Including YB-1 Controls Expression of Mouse Matrix Metalloproteinase-2 Gene in NIH3T3 Cells |
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