Modicisalibacter tunisiensis gen. nov., sp. nov., an aerobic, moderately halophilic bacterium isolated from an oilfield-water injection sample, and emended description of the family Halomonadaceae Franzmann et al. 1989 emend Dobson and Franzmann 1996 emend. Ntougias et al. 2007
1 Laboratoire de Microbiologie IRD, Biotechnologie Microbienne des Environnements Chauds, UMR D180, IRD ESIL, Universités de Provence et de la Méditerranée, 163 avenue de Luminy, 13288 Marseille cedex 9, France 2 Laboratoire d'Immuno-Microbiologie Environnementale et Cancérogenèse, Faculté des...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2007-10, Vol.57 (10), p.2307-2313 |
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| creator | Ben Ali Gam, Zouhaier Abdelkafi, Slim Casalot, Laurence Tholozan, Jean Luc Oueslati, Ridha Labat, Marc |
| description | 1 Laboratoire de Microbiologie IRD, Biotechnologie Microbienne des Environnements Chauds, UMR D180, IRD ESIL, Universités de Provence et de la Méditerranée, 163 avenue de Luminy, 13288 Marseille cedex 9, France
2 Laboratoire d'Immuno-Microbiologie Environnementale et Cancérogenèse, Faculté des Sciences de Bizerte, 70021 Zarzouna, Tunisia
3 Laboratoire des Bio-Procédés, Centre de Biotechnologie de Sfax, Route de Sidi Mansour Km 6, BP K, Sfax 3038, Tunisia
Correspondence Marc Labat marc.labat{at}esil.univmed.fr
An aerobic, moderately halophilic, Gram-negative, motile, non-sporulating bacterium, strain LIT2 T , was isolated from an oilfield-water injection after enrichment on crude oil. Strain LIT2 T grew between 15 and 45 °C and optimally at 37 °C. It grew in the presence of 1–25 % (w/v) NaCl, with an optimum at 10 % (w/v) NaCl. Predominant fatty acids were C 16 : 0 (26.9 %), C 18 : 1 7 c (22.6 %), C 16 : 1 7 c (20.4 %) C 19 : 0 cyclo 8 c (10.9 %) and C 17 : 0 (8 %). Interestingly, the relative percentages of these last two fatty acids were intermediate compared with most species among the family Halomonadaceae for which fatty acid composition has been determined. The DNA G+C content was 53.7 mol%, which is very low among the family Halomonadaceae . Strain LIT2 T exhibited 16S rRNA gene sequence similarity values of 94.06–95.15 % to members of the genus Chromohalobacter , 94.21–94.65 % to members of the genus Halomonas and 93.57 % with the single species representative of the genus Cobetia . Based on the phylogenetic and phenotypic evidence presented in this paper, we propose the name Modicisalibacter tunisiensis gen. nov., sp. nov. to accommodate strain LIT2 T . The type strain of Modicisalibacter tunisiensis is LIT2 T (=CCUG 52917 T =CIP 109206 T ). A reassignment of the descriptive 16S rRNA signature characteristics of the family Halomonadaceae permitted placement of the new genus Modicisalibacter into the family.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain LIT2 T is DQ641495 . |
| doi_str_mv | 10.1099/ijs.0.65088-0 |
| format | Article |
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2 Laboratoire d'Immuno-Microbiologie Environnementale et Cancérogenèse, Faculté des Sciences de Bizerte, 70021 Zarzouna, Tunisia
3 Laboratoire des Bio-Procédés, Centre de Biotechnologie de Sfax, Route de Sidi Mansour Km 6, BP K, Sfax 3038, Tunisia
Correspondence Marc Labat marc.labat{at}esil.univmed.fr
An aerobic, moderately halophilic, Gram-negative, motile, non-sporulating bacterium, strain LIT2 T , was isolated from an oilfield-water injection after enrichment on crude oil. Strain LIT2 T grew between 15 and 45 °C and optimally at 37 °C. It grew in the presence of 1–25 % (w/v) NaCl, with an optimum at 10 % (w/v) NaCl. Predominant fatty acids were C 16 : 0 (26.9 %), C 18 : 1 7 c (22.6 %), C 16 : 1 7 c (20.4 %) C 19 : 0 cyclo 8 c (10.9 %) and C 17 : 0 (8 %). Interestingly, the relative percentages of these last two fatty acids were intermediate compared with most species among the family Halomonadaceae for which fatty acid composition has been determined. The DNA G+C content was 53.7 mol%, which is very low among the family Halomonadaceae . Strain LIT2 T exhibited 16S rRNA gene sequence similarity values of 94.06–95.15 % to members of the genus Chromohalobacter , 94.21–94.65 % to members of the genus Halomonas and 93.57 % with the single species representative of the genus Cobetia . Based on the phylogenetic and phenotypic evidence presented in this paper, we propose the name Modicisalibacter tunisiensis gen. nov., sp. nov. to accommodate strain LIT2 T . The type strain of Modicisalibacter tunisiensis is LIT2 T (=CCUG 52917 T =CIP 109206 T ). A reassignment of the descriptive 16S rRNA signature characteristics of the family Halomonadaceae permitted placement of the new genus Modicisalibacter into the family.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain LIT2 T is DQ641495 .</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.65088-0</identifier><identifier>PMID: 17911302</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Anaerobiosis - physiology ; Bacterial Typing Techniques ; Bacteriology ; Base Composition ; Biological and medical sciences ; DNA, Bacterial - chemistry ; DNA, Bacterial - genetics ; DNA, Ribosomal - chemistry ; DNA, Ribosomal - genetics ; Fatty Acids - analysis ; Fundamental and applied biological sciences. Psychology ; Genes, rRNA ; Halomonadaceae - classification ; Halomonadaceae - cytology ; Halomonadaceae - isolation & purification ; Halomonadaceae - physiology ; Locomotion - physiology ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Petroleum - microbiology ; Phylogeny ; RNA, Bacterial - genetics ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Sequence Homology, Nucleic Acid ; Sodium Chloride - metabolism ; Soil Microbiology ; Systematics ; Temperature ; Water Microbiology</subject><ispartof>International journal of systematic and evolutionary microbiology, 2007-10, Vol.57 (10), p.2307-2313</ispartof><rights>2008 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c324t-ce33cafd2c3be50cab35c46dc5f1c7382c7029643830dbf4ae9ebe784aa683b83</citedby><cites>FETCH-LOGICAL-c324t-ce33cafd2c3be50cab35c46dc5f1c7382c7029643830dbf4ae9ebe784aa683b83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,781,785,3747,3748,27929,27930</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=19172303$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17911302$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ben Ali Gam, Zouhaier</creatorcontrib><creatorcontrib>Abdelkafi, Slim</creatorcontrib><creatorcontrib>Casalot, Laurence</creatorcontrib><creatorcontrib>Tholozan, Jean Luc</creatorcontrib><creatorcontrib>Oueslati, Ridha</creatorcontrib><creatorcontrib>Labat, Marc</creatorcontrib><title>Modicisalibacter tunisiensis gen. nov., sp. nov., an aerobic, moderately halophilic bacterium isolated from an oilfield-water injection sample, and emended description of the family Halomonadaceae Franzmann et al. 1989 emend Dobson and Franzmann 1996 emend. Ntougias et al. 2007</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 Laboratoire de Microbiologie IRD, Biotechnologie Microbienne des Environnements Chauds, UMR D180, IRD ESIL, Universités de Provence et de la Méditerranée, 163 avenue de Luminy, 13288 Marseille cedex 9, France
2 Laboratoire d'Immuno-Microbiologie Environnementale et Cancérogenèse, Faculté des Sciences de Bizerte, 70021 Zarzouna, Tunisia
3 Laboratoire des Bio-Procédés, Centre de Biotechnologie de Sfax, Route de Sidi Mansour Km 6, BP K, Sfax 3038, Tunisia
Correspondence Marc Labat marc.labat{at}esil.univmed.fr
An aerobic, moderately halophilic, Gram-negative, motile, non-sporulating bacterium, strain LIT2 T , was isolated from an oilfield-water injection after enrichment on crude oil. Strain LIT2 T grew between 15 and 45 °C and optimally at 37 °C. It grew in the presence of 1–25 % (w/v) NaCl, with an optimum at 10 % (w/v) NaCl. Predominant fatty acids were C 16 : 0 (26.9 %), C 18 : 1 7 c (22.6 %), C 16 : 1 7 c (20.4 %) C 19 : 0 cyclo 8 c (10.9 %) and C 17 : 0 (8 %). Interestingly, the relative percentages of these last two fatty acids were intermediate compared with most species among the family Halomonadaceae for which fatty acid composition has been determined. The DNA G+C content was 53.7 mol%, which is very low among the family Halomonadaceae . Strain LIT2 T exhibited 16S rRNA gene sequence similarity values of 94.06–95.15 % to members of the genus Chromohalobacter , 94.21–94.65 % to members of the genus Halomonas and 93.57 % with the single species representative of the genus Cobetia . Based on the phylogenetic and phenotypic evidence presented in this paper, we propose the name Modicisalibacter tunisiensis gen. nov., sp. nov. to accommodate strain LIT2 T . The type strain of Modicisalibacter tunisiensis is LIT2 T (=CCUG 52917 T =CIP 109206 T ). A reassignment of the descriptive 16S rRNA signature characteristics of the family Halomonadaceae permitted placement of the new genus Modicisalibacter into the family.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain LIT2 T is DQ641495 .</description><subject>Anaerobiosis - physiology</subject><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>DNA, Bacterial - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>DNA, Ribosomal - chemistry</subject><subject>DNA, Ribosomal - genetics</subject><subject>Fatty Acids - analysis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes, rRNA</subject><subject>Halomonadaceae - classification</subject><subject>Halomonadaceae - cytology</subject><subject>Halomonadaceae - isolation & purification</subject><subject>Halomonadaceae - physiology</subject><subject>Locomotion - physiology</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Petroleum - microbiology</subject><subject>Phylogeny</subject><subject>RNA, Bacterial - genetics</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Sodium Chloride - metabolism</subject><subject>Soil Microbiology</subject><subject>Systematics</subject><subject>Temperature</subject><subject>Water Microbiology</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpFkktv1TAQhQMC0VJYwhJ5AxJSE5w4zyUqlCIV2MA6mtiTe-fKj2AnVOXX4zS3dGXL851zLPskyaucZznvug90CBnP6oq3bcofJ6d5WddpxUX55P--qE-S5yEcOI8HnD9LTvKmy3PBi9NHr785RZICaBpAzujZvFgKhDZQYDu0GbPuT3bOwnS_A8sAvRtInjPjFHqYUd-yPWg37UmTZJsTLYZRcDqOFRu9M6vSkR4JtUpvYA0je0A5k7MsgJk0ru6KoUGrokhhkJ6mu7kb2bxHNoKhGHYVw4yzoEAiILv0YP8asJbhzEBnLO_abrNhn9wQon71fcDyrqu3eca-z27ZEYR7bcF58yJ5OoIO-PK4niW_Lj__vLhKr398-Xrx8TqVoijnVKIQEkZVSDFgxSUMopJlrWQ15rIRbSEbXnR1KVrB1TCWgB0O2LQlQN2KoRVnybvNd_Lu94Jh7g0FiVqDRbeEPlJl0YgugukGSu9C8Dj2kycD_rbPeb8WoY9F6Hl_V4SeR_7N0XgZDKoH-vjzEXh7BCBI0GN8mliDB67Lm0JwEbn3G7en3f6GPPaxFIbkWgC3hlbNeoXINuIf6r7NZA</recordid><startdate>20071001</startdate><enddate>20071001</enddate><creator>Ben Ali Gam, Zouhaier</creator><creator>Abdelkafi, Slim</creator><creator>Casalot, Laurence</creator><creator>Tholozan, Jean Luc</creator><creator>Oueslati, Ridha</creator><creator>Labat, Marc</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20071001</creationdate><title>Modicisalibacter tunisiensis gen. nov., sp. nov., an aerobic, moderately halophilic bacterium isolated from an oilfield-water injection sample, and emended description of the family Halomonadaceae Franzmann et al. 1989 emend Dobson and Franzmann 1996 emend. Ntougias et al. 2007</title><author>Ben Ali Gam, Zouhaier ; Abdelkafi, Slim ; Casalot, Laurence ; Tholozan, Jean Luc ; Oueslati, Ridha ; Labat, Marc</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c324t-ce33cafd2c3be50cab35c46dc5f1c7382c7029643830dbf4ae9ebe784aa683b83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Anaerobiosis - physiology</topic><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>DNA, Bacterial - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>DNA, Ribosomal - chemistry</topic><topic>DNA, Ribosomal - genetics</topic><topic>Fatty Acids - analysis</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes, rRNA</topic><topic>Halomonadaceae - classification</topic><topic>Halomonadaceae - cytology</topic><topic>Halomonadaceae - isolation & purification</topic><topic>Halomonadaceae - physiology</topic><topic>Locomotion - physiology</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Petroleum - microbiology</topic><topic>Phylogeny</topic><topic>RNA, Bacterial - genetics</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Sodium Chloride - metabolism</topic><topic>Soil Microbiology</topic><topic>Systematics</topic><topic>Temperature</topic><topic>Water Microbiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ben Ali Gam, Zouhaier</creatorcontrib><creatorcontrib>Abdelkafi, Slim</creatorcontrib><creatorcontrib>Casalot, Laurence</creatorcontrib><creatorcontrib>Tholozan, Jean Luc</creatorcontrib><creatorcontrib>Oueslati, Ridha</creatorcontrib><creatorcontrib>Labat, Marc</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ben Ali Gam, Zouhaier</au><au>Abdelkafi, Slim</au><au>Casalot, Laurence</au><au>Tholozan, Jean Luc</au><au>Oueslati, Ridha</au><au>Labat, Marc</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Modicisalibacter tunisiensis gen. nov., sp. nov., an aerobic, moderately halophilic bacterium isolated from an oilfield-water injection sample, and emended description of the family Halomonadaceae Franzmann et al. 1989 emend Dobson and Franzmann 1996 emend. Ntougias et al. 2007</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2007-10-01</date><risdate>2007</risdate><volume>57</volume><issue>10</issue><spage>2307</spage><epage>2313</epage><pages>2307-2313</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 Laboratoire de Microbiologie IRD, Biotechnologie Microbienne des Environnements Chauds, UMR D180, IRD ESIL, Universités de Provence et de la Méditerranée, 163 avenue de Luminy, 13288 Marseille cedex 9, France
2 Laboratoire d'Immuno-Microbiologie Environnementale et Cancérogenèse, Faculté des Sciences de Bizerte, 70021 Zarzouna, Tunisia
3 Laboratoire des Bio-Procédés, Centre de Biotechnologie de Sfax, Route de Sidi Mansour Km 6, BP K, Sfax 3038, Tunisia
Correspondence Marc Labat marc.labat{at}esil.univmed.fr
An aerobic, moderately halophilic, Gram-negative, motile, non-sporulating bacterium, strain LIT2 T , was isolated from an oilfield-water injection after enrichment on crude oil. Strain LIT2 T grew between 15 and 45 °C and optimally at 37 °C. It grew in the presence of 1–25 % (w/v) NaCl, with an optimum at 10 % (w/v) NaCl. Predominant fatty acids were C 16 : 0 (26.9 %), C 18 : 1 7 c (22.6 %), C 16 : 1 7 c (20.4 %) C 19 : 0 cyclo 8 c (10.9 %) and C 17 : 0 (8 %). Interestingly, the relative percentages of these last two fatty acids were intermediate compared with most species among the family Halomonadaceae for which fatty acid composition has been determined. The DNA G+C content was 53.7 mol%, which is very low among the family Halomonadaceae . Strain LIT2 T exhibited 16S rRNA gene sequence similarity values of 94.06–95.15 % to members of the genus Chromohalobacter , 94.21–94.65 % to members of the genus Halomonas and 93.57 % with the single species representative of the genus Cobetia . Based on the phylogenetic and phenotypic evidence presented in this paper, we propose the name Modicisalibacter tunisiensis gen. nov., sp. nov. to accommodate strain LIT2 T . The type strain of Modicisalibacter tunisiensis is LIT2 T (=CCUG 52917 T =CIP 109206 T ). A reassignment of the descriptive 16S rRNA signature characteristics of the family Halomonadaceae permitted placement of the new genus Modicisalibacter into the family.
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain LIT2 T is DQ641495 .</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>17911302</pmid><doi>10.1099/ijs.0.65088-0</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| source | MEDLINE; Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
| subjects | Anaerobiosis - physiology Bacterial Typing Techniques Bacteriology Base Composition Biological and medical sciences DNA, Bacterial - chemistry DNA, Bacterial - genetics DNA, Ribosomal - chemistry DNA, Ribosomal - genetics Fatty Acids - analysis Fundamental and applied biological sciences. Psychology Genes, rRNA Halomonadaceae - classification Halomonadaceae - cytology Halomonadaceae - isolation & purification Halomonadaceae - physiology Locomotion - physiology Microbiology Miscellaneous Molecular Sequence Data Petroleum - microbiology Phylogeny RNA, Bacterial - genetics RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Sequence Homology, Nucleic Acid Sodium Chloride - metabolism Soil Microbiology Systematics Temperature Water Microbiology |
| title | Modicisalibacter tunisiensis gen. nov., sp. nov., an aerobic, moderately halophilic bacterium isolated from an oilfield-water injection sample, and emended description of the family Halomonadaceae Franzmann et al. 1989 emend Dobson and Franzmann 1996 emend. Ntougias et al. 2007 |
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