De Novo mutation found in the porphobilinogen deaminase gene in Slovak acute intermittent porphyria patient: molecular biochemical study
The porphyrias are group of mostly inherited disorders in which a specific spectrum of accumulated and excreted porphyrins and heme precursors are associated with characteristic clinical features. There are eight enzymes involved in the heme synthesis and defects in seven of them cause porphyria. Fo...
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description | The porphyrias are group of mostly inherited disorders in which a specific spectrum of accumulated and excreted porphyrins and heme precursors are associated with characteristic clinical features. There are eight enzymes involved in the heme synthesis and defects in seven of them cause porphyria. Four of them are described as acute hepatic porphyrias, which share possible precipitation of acute attacks with symptoms engaging the nervous system. Acute intermittent porphyria (AIP), caused by partial deficiency of the porphobilinogen deaminase (PBGD), is the most frequent among hepatic porphyrias. Clinical expression is highly variable and ~ 90 % of AIP heterozygotes remain asymptomatic throughout life. During systematic genetic analysis of the AIP patients diagnosed in the Czech and Slovak Republics, we found a special case of AIP. In a 15-year-old boy with abdominal and subsequent neurological symptomatology, we identified de novo mutation 966insA within the PBGD gene leading to a stop codon after 36 completely different amino acids compared to the wt-sequence. To establish the effects of this mutation on the protein structure, we expressed mutant constructs with described mutation in E. coli and analyzed their biochemical and enzymatic properties. Moreover, computer-assisted protein structure prediction was performed. |
doi_str_mv | 10.33549/physiolres.930000.55.S2.145 |
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There are eight enzymes involved in the heme synthesis and defects in seven of them cause porphyria. Four of them are described as acute hepatic porphyrias, which share possible precipitation of acute attacks with symptoms engaging the nervous system. Acute intermittent porphyria (AIP), caused by partial deficiency of the porphobilinogen deaminase (PBGD), is the most frequent among hepatic porphyrias. Clinical expression is highly variable and ~ 90 % of AIP heterozygotes remain asymptomatic throughout life. During systematic genetic analysis of the AIP patients diagnosed in the Czech and Slovak Republics, we found a special case of AIP. In a 15-year-old boy with abdominal and subsequent neurological symptomatology, we identified de novo mutation 966insA within the PBGD gene leading to a stop codon after 36 completely different amino acids compared to the wt-sequence. To establish the effects of this mutation on the protein structure, we expressed mutant constructs with described mutation in E. coli and analyzed their biochemical and enzymatic properties. Moreover, computer-assisted protein structure prediction was performed.</description><identifier>ISSN: 0862-8408</identifier><identifier>EISSN: 1802-9973</identifier><identifier>DOI: 10.33549/physiolres.930000.55.S2.145</identifier><identifier>PMID: 17298218</identifier><language>eng</language><publisher>Czech Republic: Institute of Physiology</publisher><subject>Adolescent ; Amino acids ; Base Sequence ; DNA Mutational Analysis ; DNA polymerase ; E coli ; Enzymes ; Escherichia coli - metabolism ; Humans ; Hydroxymethylbilane Synthase - chemistry ; Hydroxymethylbilane Synthase - genetics ; Hydroxymethylbilane Synthase - isolation & purification ; Male ; Models, Molecular ; Molecular biology ; Molecular Sequence Data ; Mutation ; Pedigree ; Porphyria, Acute Intermittent - diagnosis ; Porphyria, Acute Intermittent - enzymology ; Porphyria, Acute Intermittent - genetics ; Thermal cycling ; Whites</subject><ispartof>Physiological research, 2006, Vol.55 Suppl 2, p.S145-S154</ispartof><rights>Copyright Institute of Physiology 2006</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c402t-d79895803f4e3f4404bb33d96d9d84965245b9e20528bb4dd416d8e1241778383</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,864,4024,27923,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17298218$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ulbrichova, D</creatorcontrib><creatorcontrib>Flachsova, E</creatorcontrib><creatorcontrib>Hrdinka, M</creatorcontrib><creatorcontrib>Saligova, J</creatorcontrib><creatorcontrib>Bazar, J</creatorcontrib><creatorcontrib>Raman, C S</creatorcontrib><creatorcontrib>Martasek, P</creatorcontrib><title>De Novo mutation found in the porphobilinogen deaminase gene in Slovak acute intermittent porphyria patient: molecular biochemical study</title><title>Physiological research</title><addtitle>Physiol Res</addtitle><description>The porphyrias are group of mostly inherited disorders in which a specific spectrum of accumulated and excreted porphyrins and heme precursors are associated with characteristic clinical features. There are eight enzymes involved in the heme synthesis and defects in seven of them cause porphyria. Four of them are described as acute hepatic porphyrias, which share possible precipitation of acute attacks with symptoms engaging the nervous system. Acute intermittent porphyria (AIP), caused by partial deficiency of the porphobilinogen deaminase (PBGD), is the most frequent among hepatic porphyrias. Clinical expression is highly variable and ~ 90 % of AIP heterozygotes remain asymptomatic throughout life. During systematic genetic analysis of the AIP patients diagnosed in the Czech and Slovak Republics, we found a special case of AIP. In a 15-year-old boy with abdominal and subsequent neurological symptomatology, we identified de novo mutation 966insA within the PBGD gene leading to a stop codon after 36 completely different amino acids compared to the wt-sequence. To establish the effects of this mutation on the protein structure, we expressed mutant constructs with described mutation in E. coli and analyzed their biochemical and enzymatic properties. Moreover, computer-assisted protein structure prediction was performed.</description><subject>Adolescent</subject><subject>Amino acids</subject><subject>Base Sequence</subject><subject>DNA Mutational Analysis</subject><subject>DNA polymerase</subject><subject>E coli</subject><subject>Enzymes</subject><subject>Escherichia coli - metabolism</subject><subject>Humans</subject><subject>Hydroxymethylbilane Synthase - chemistry</subject><subject>Hydroxymethylbilane Synthase - genetics</subject><subject>Hydroxymethylbilane Synthase - isolation & purification</subject><subject>Male</subject><subject>Models, Molecular</subject><subject>Molecular biology</subject><subject>Molecular Sequence Data</subject><subject>Mutation</subject><subject>Pedigree</subject><subject>Porphyria, Acute Intermittent - diagnosis</subject><subject>Porphyria, Acute Intermittent - enzymology</subject><subject>Porphyria, Acute Intermittent - genetics</subject><subject>Thermal cycling</subject><subject>Whites</subject><issn>0862-8408</issn><issn>1802-9973</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNpdkduKFDEQhoMo7uzqK0gQ8a7bHLsT8UbW9QCLXoxeh3Snxsna3WlzWJg38LHNOAMLBkKo8P1VIR9CryhpOZdCv1n3h-TDFCG1mpO6WinbLWupkI_QhirCGq17_hhtiOpYowRRF-gypTtCWE96_hRd0J5pxajaoD8fAH8N9wHPJdvsw4J3oSwO-wXnPeA1xHUfBj_5JfyEBTuws19sAlwrOFLbKdzbX9iOJR_rDHH2OcOST9lD9BavtXO9eYvnMMFYJhvx4MO4h9mPdsIpF3d4hp7s7JTg-fm8Qj8-3ny__tzcfvv05fr9bTMKwnLjeq20VITvBNQtiBgGzp3unHZK6E4yIQcNjEimhkE4J2jnFFAmaN8rrvgVen3qu8bwu0DKZvZphGmyC4SSTKc4PX5zBV_-B96FEpf6NsMoo11He1qhdydojCGlCDuzRj_beDCUmH-6zIMuc9JlpDRbZqquGn9xnlGGGdxD-OyH_wVpMpcS</recordid><startdate>2006</startdate><enddate>2006</enddate><creator>Ulbrichova, D</creator><creator>Flachsova, E</creator><creator>Hrdinka, M</creator><creator>Saligova, J</creator><creator>Bazar, J</creator><creator>Raman, C S</creator><creator>Martasek, P</creator><general>Institute of Physiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>4T-</scope><scope>4U-</scope><scope>7RV</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BYOGL</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>NAPCQ</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope></search><sort><creationdate>2006</creationdate><title>De Novo mutation found in the porphobilinogen deaminase gene in Slovak acute intermittent porphyria patient: molecular biochemical study</title><author>Ulbrichova, D ; Flachsova, E ; Hrdinka, M ; Saligova, J ; Bazar, J ; Raman, C S ; Martasek, P</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c402t-d79895803f4e3f4404bb33d96d9d84965245b9e20528bb4dd416d8e1241778383</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Adolescent</topic><topic>Amino acids</topic><topic>Base Sequence</topic><topic>DNA Mutational Analysis</topic><topic>DNA polymerase</topic><topic>E coli</topic><topic>Enzymes</topic><topic>Escherichia coli - metabolism</topic><topic>Humans</topic><topic>Hydroxymethylbilane Synthase - chemistry</topic><topic>Hydroxymethylbilane Synthase - genetics</topic><topic>Hydroxymethylbilane Synthase - isolation & purification</topic><topic>Male</topic><topic>Models, Molecular</topic><topic>Molecular biology</topic><topic>Molecular Sequence Data</topic><topic>Mutation</topic><topic>Pedigree</topic><topic>Porphyria, Acute Intermittent - diagnosis</topic><topic>Porphyria, Acute Intermittent - enzymology</topic><topic>Porphyria, Acute Intermittent - genetics</topic><topic>Thermal cycling</topic><topic>Whites</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ulbrichova, D</creatorcontrib><creatorcontrib>Flachsova, E</creatorcontrib><creatorcontrib>Hrdinka, M</creatorcontrib><creatorcontrib>Saligova, J</creatorcontrib><creatorcontrib>Bazar, J</creatorcontrib><creatorcontrib>Raman, C S</creatorcontrib><creatorcontrib>Martasek, P</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Docstoc</collection><collection>University Readers</collection><collection>Nursing & Allied Health Database</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>East Europe, Central Europe Database</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Nursing & Allied Health Premium</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Physiological research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ulbrichova, D</au><au>Flachsova, E</au><au>Hrdinka, M</au><au>Saligova, J</au><au>Bazar, J</au><au>Raman, C S</au><au>Martasek, P</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>De Novo mutation found in the porphobilinogen deaminase gene in Slovak acute intermittent porphyria patient: molecular biochemical study</atitle><jtitle>Physiological research</jtitle><addtitle>Physiol Res</addtitle><date>2006</date><risdate>2006</risdate><volume>55 Suppl 2</volume><spage>S145</spage><epage>S154</epage><pages>S145-S154</pages><issn>0862-8408</issn><eissn>1802-9973</eissn><abstract>The porphyrias are group of mostly inherited disorders in which a specific spectrum of accumulated and excreted porphyrins and heme precursors are associated with characteristic clinical features. There are eight enzymes involved in the heme synthesis and defects in seven of them cause porphyria. Four of them are described as acute hepatic porphyrias, which share possible precipitation of acute attacks with symptoms engaging the nervous system. Acute intermittent porphyria (AIP), caused by partial deficiency of the porphobilinogen deaminase (PBGD), is the most frequent among hepatic porphyrias. Clinical expression is highly variable and ~ 90 % of AIP heterozygotes remain asymptomatic throughout life. During systematic genetic analysis of the AIP patients diagnosed in the Czech and Slovak Republics, we found a special case of AIP. In a 15-year-old boy with abdominal and subsequent neurological symptomatology, we identified de novo mutation 966insA within the PBGD gene leading to a stop codon after 36 completely different amino acids compared to the wt-sequence. To establish the effects of this mutation on the protein structure, we expressed mutant constructs with described mutation in E. coli and analyzed their biochemical and enzymatic properties. Moreover, computer-assisted protein structure prediction was performed.</abstract><cop>Czech Republic</cop><pub>Institute of Physiology</pub><pmid>17298218</pmid><doi>10.33549/physiolres.930000.55.S2.145</doi><oa>free_for_read</oa></addata></record> |
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subjects | Adolescent Amino acids Base Sequence DNA Mutational Analysis DNA polymerase E coli Enzymes Escherichia coli - metabolism Humans Hydroxymethylbilane Synthase - chemistry Hydroxymethylbilane Synthase - genetics Hydroxymethylbilane Synthase - isolation & purification Male Models, Molecular Molecular biology Molecular Sequence Data Mutation Pedigree Porphyria, Acute Intermittent - diagnosis Porphyria, Acute Intermittent - enzymology Porphyria, Acute Intermittent - genetics Thermal cycling Whites |
title | De Novo mutation found in the porphobilinogen deaminase gene in Slovak acute intermittent porphyria patient: molecular biochemical study |
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