Exploring the limits of benzimidazole DNA-binding oligomers for the hypoxia inducible factor (HIF) site
The vascular endothelial growth factor (VEGF) and its receptors have been implicated as key-factors in tumor angiogenesis and are major targets in cancer therapy. New oligomers which mimic the architecture of DNA-binding polyamides have been designed to target the hypoxia inducible factor (HIF-1α) b...
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Veröffentlicht in: | Bioorganic & medicinal chemistry 2006-12, Vol.14 (24), p.8539-8549 |
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description | The vascular endothelial growth factor (VEGF) and its receptors have been implicated as key-factors in tumor angiogenesis and are major targets in cancer therapy. New oligomers which mimic the architecture of DNA-binding polyamides have been designed to target the hypoxia inducible factor (HIF-1α) binding site on the promoter of VEGF gene. These oligomers incorporate an increasing number of six–five fused rings such as hydroxybenzimidazole–imidazole, benzimidazole–pyrrole, benzimidazole–chlorothiophene, and imidazopyridine–pyrrole, and bind the VEGF hypoxia response element (HRE) 5′-TACGT-3′ with high affinity and selectivity. |
doi_str_mv | 10.1016/j.bmc.2006.08.028 |
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These oligomers incorporate an increasing number of six–five fused rings such as hydroxybenzimidazole–imidazole, benzimidazole–pyrrole, benzimidazole–chlorothiophene, and imidazopyridine–pyrrole, and bind the VEGF hypoxia response element (HRE) 5′-TACGT-3′ with high affinity and selectivity.</description><subject>Antineoplastic agents</subject><subject>Benzimidazoles - chemical synthesis</subject><subject>Benzimidazoles - chemistry</subject><subject>Benzimidazoles - pharmacology</subject><subject>Biological and medical sciences</subject><subject>Deoxyribonuclease I - metabolism</subject><subject>DNA - metabolism</subject><subject>DNA Footprinting</subject><subject>General aspects</subject><subject>Humans</subject><subject>Hypoxia-Inducible Factor 1, alpha Subunit - metabolism</subject><subject>Medical sciences</subject><subject>Nylons - chemical synthesis</subject><subject>Nylons - chemistry</subject><subject>Nylons - pharmacology</subject><subject>Pharmacology. Drug treatments</subject><subject>Promoter Regions, Genetic</subject><subject>Response Elements - drug effects</subject><subject>Transcription, Genetic - drug effects</subject><subject>Vascular Endothelial Growth Factor A - genetics</subject><subject>Vascular Endothelial Growth Factor A - metabolism</subject><issn>0968-0896</issn><issn>1464-3391</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU9v1DAQxS0EokvhA3BBuYDgkOCxvY6tnqrS0koVXOBs-e_WqyRe7Cxq--lx2JV6g9NoNL_39DQPobeAO8DAP287M9qOYMw7LDpMxDO0AsZZS6mE52iFJRctFpKfoFelbDHGhEl4iU6Ayx6AyBXaXN7vhpTjtGnmO98McYxzaVJojJ8e6-L0Yxp88-XbeWvi5BYuDXGTRp9LE1L-q7p72KX7qJsK7G00lQ_azvX48frm6lNT4uxfoxdBD8W_Oc5T9PPq8sfFdXv7_evNxflta1kv5tYEMK5nxoU105QGAXrJjIFZIjWmaytYT7CpiJCMEkndGoLrOcVr74Wjp-jDwXeX06-9L7MaY7F-GPTk074oLoBAj_l_QZCMV39WQTiANqdSsg9ql-Oo84MCrJYa1FbVGtRSg8JC1Rqq5t3RfG9G754Ux79X4P0R0MXqIWQ92VieOEF6wmFJeXbgfP3Z7-izKjb6yXoXs7ezcin-I8Yf3rukPw</recordid><startdate>20061215</startdate><enddate>20061215</enddate><creator>Viger, Anne</creator><creator>Dervan, Peter B.</creator><general>Elsevier Ltd</general><general>Elsevier Science</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20061215</creationdate><title>Exploring the limits of benzimidazole DNA-binding oligomers for the hypoxia inducible factor (HIF) site</title><author>Viger, Anne ; Dervan, Peter B.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c478t-bf1bd74bdf54a33f81a0249014c29a035c84720b74b8943293d51fd76305ee8d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Antineoplastic agents</topic><topic>Benzimidazoles - chemical synthesis</topic><topic>Benzimidazoles - chemistry</topic><topic>Benzimidazoles - pharmacology</topic><topic>Biological and medical sciences</topic><topic>Deoxyribonuclease I - metabolism</topic><topic>DNA - metabolism</topic><topic>DNA Footprinting</topic><topic>General aspects</topic><topic>Humans</topic><topic>Hypoxia-Inducible Factor 1, alpha Subunit - metabolism</topic><topic>Medical sciences</topic><topic>Nylons - chemical synthesis</topic><topic>Nylons - chemistry</topic><topic>Nylons - pharmacology</topic><topic>Pharmacology. Drug treatments</topic><topic>Promoter Regions, Genetic</topic><topic>Response Elements - drug effects</topic><topic>Transcription, Genetic - drug effects</topic><topic>Vascular Endothelial Growth Factor A - genetics</topic><topic>Vascular Endothelial Growth Factor A - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Viger, Anne</creatorcontrib><creatorcontrib>Dervan, Peter B.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Bioorganic & medicinal chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Viger, Anne</au><au>Dervan, Peter B.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Exploring the limits of benzimidazole DNA-binding oligomers for the hypoxia inducible factor (HIF) site</atitle><jtitle>Bioorganic & medicinal chemistry</jtitle><addtitle>Bioorg Med Chem</addtitle><date>2006-12-15</date><risdate>2006</risdate><volume>14</volume><issue>24</issue><spage>8539</spage><epage>8549</epage><pages>8539-8549</pages><issn>0968-0896</issn><eissn>1464-3391</eissn><abstract>The vascular endothelial growth factor (VEGF) and its receptors have been implicated as key-factors in tumor angiogenesis and are major targets in cancer therapy. 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subjects | Antineoplastic agents Benzimidazoles - chemical synthesis Benzimidazoles - chemistry Benzimidazoles - pharmacology Biological and medical sciences Deoxyribonuclease I - metabolism DNA - metabolism DNA Footprinting General aspects Humans Hypoxia-Inducible Factor 1, alpha Subunit - metabolism Medical sciences Nylons - chemical synthesis Nylons - chemistry Nylons - pharmacology Pharmacology. Drug treatments Promoter Regions, Genetic Response Elements - drug effects Transcription, Genetic - drug effects Vascular Endothelial Growth Factor A - genetics Vascular Endothelial Growth Factor A - metabolism |
title | Exploring the limits of benzimidazole DNA-binding oligomers for the hypoxia inducible factor (HIF) site |
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