Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT)
This article describes an accurate and fast method for fiber orientation mapping using multidirectional diffusion-weighted magnetic resonance (MR) data. This novel approach utilizes the Fourier transform relationship between the water displacement probabilities and diffusion-attenuated MR signal exp...
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Veröffentlicht in: | NeuroImage (Orlando, Fla.) Fla.), 2006-07, Vol.31 (3), p.1086-1103 |
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description | This article describes an accurate and fast method for fiber orientation mapping using multidirectional diffusion-weighted magnetic resonance (MR) data. This novel approach utilizes the Fourier transform relationship between the water displacement probabilities and diffusion-attenuated MR signal expressed in spherical coordinates. The radial part of the Fourier integral is evaluated analytically under the assumption that MR signal attenuates exponentially. The values of the resulting functions are evaluated at a fixed distance away from the origin. The spherical harmonic transform of these functions yields the Laplace series coefficients of the probabilities on a sphere of fixed radius. Alternatively, probability values can be computed nonparametrically using Legendre polynomials. Orientation maps calculated from excised rat nervous tissue data demonstrate this technique's ability to accurately resolve crossing fibers in anatomical regions such as the optic chiasm. This proposed methodology has a trivial extension to multiexponential diffusion-weighted signal decay. The developed methods will improve the reliability of tractography schemes and may make it possible to correctly identify the neural connections between functionally connected regions of the nervous system. |
doi_str_mv | 10.1016/j.neuroimage.2006.01.024 |
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This novel approach utilizes the Fourier transform relationship between the water displacement probabilities and diffusion-attenuated MR signal expressed in spherical coordinates. The radial part of the Fourier integral is evaluated analytically under the assumption that MR signal attenuates exponentially. The values of the resulting functions are evaluated at a fixed distance away from the origin. The spherical harmonic transform of these functions yields the Laplace series coefficients of the probabilities on a sphere of fixed radius. Alternatively, probability values can be computed nonparametrically using Legendre polynomials. Orientation maps calculated from excised rat nervous tissue data demonstrate this technique's ability to accurately resolve crossing fibers in anatomical regions such as the optic chiasm. This proposed methodology has a trivial extension to multiexponential diffusion-weighted signal decay. 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The developed methods will improve the reliability of tractography schemes and may make it possible to correctly identify the neural connections between functionally connected regions of the nervous system.</description><subject>Animals</subject><subject>Anisotropy</subject><subject>Brain - anatomy & histology</subject><subject>Brain Mapping - methods</subject><subject>Diffusion</subject><subject>Diffusion Magnetic Resonance Imaging - methods</subject><subject>Fourier</subject><subject>Fourier Analysis</subject><subject>Fourier transforms</subject><subject>HARDI</subject><subject>Image Enhancement - methods</subject><subject>Image Processing, Computer-Assisted - methods</subject><subject>Models, Statistical</subject><subject>MRI</subject><subject>Nerve Fibers - diagnostic imaging</subject><subject>Nerve Tissue - anatomy & histology</subject><subject>Optic Chiasm - anatomy & histology</subject><subject>Rats</subject><subject>Spherical harmonics</subject><subject>Spinal Cord - anatomy & histology</subject><subject>Standard deviation</subject><subject>Tensor</subject><subject>Ultrasonography</subject><issn>1053-8119</issn><issn>1095-9572</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqFkVuLFDEQRoMo7kX_gjQI4j50W-lO0smju15hYUHWV0MmXdnN0N0ZcxH992acgQVf9iUXOFVFfYeQhkJHgYp3227FEoNfzB12PYDogHbQsyfklILireJj_3T_5kMrKVUn5CylLQAoyuRzckIFZ4IBOyU_vmEKc8k-rE1wjQ3LbsbfTfYpFWwWb2Mw0d77jDaXiE1Jfr1r8j02k3eu_vZ10eOazb8eOZo1uRCX5u2Hm9uLF-SZM3PCl8f7nHz_9PH26kt7ffP569X769aygeaWAW7GCZVg1KEURkjhQFgjezaJQQyMUT4OgzJc8npuHGxAoXU49tNgOQ7n5M2h7y6GnwVT1otPFufZrBhK0kKCFKDYoyCtzNj3soKv_wO3ocS1LqEph7FnXClRKXmgak4pRXR6F6uV-EdT0HtVeqsfVOm9Kg1UV1W19NVxQNksOD0UHt1U4PIAYA3ul8eok61BW5x8rDb0FPzjU_4Cpzmqug</recordid><startdate>20060701</startdate><enddate>20060701</enddate><creator>Özarslan, Evren</creator><creator>Shepherd, Timothy M.</creator><creator>Vemuri, Baba C.</creator><creator>Blackband, Stephen J.</creator><creator>Mareci, Thomas H.</creator><general>Elsevier Inc</general><general>Elsevier Limited</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>88G</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2M</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PSYQQ</scope><scope>Q9U</scope><scope>RC3</scope><scope>7QO</scope><scope>7X8</scope></search><sort><creationdate>20060701</creationdate><title>Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT)</title><author>Özarslan, Evren ; 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The developed methods will improve the reliability of tractography schemes and may make it possible to correctly identify the neural connections between functionally connected regions of the nervous system.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>16546404</pmid><doi>10.1016/j.neuroimage.2006.01.024</doi><tpages>18</tpages></addata></record> |
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subjects | Animals Anisotropy Brain - anatomy & histology Brain Mapping - methods Diffusion Diffusion Magnetic Resonance Imaging - methods Fourier Fourier Analysis Fourier transforms HARDI Image Enhancement - methods Image Processing, Computer-Assisted - methods Models, Statistical MRI Nerve Fibers - diagnostic imaging Nerve Tissue - anatomy & histology Optic Chiasm - anatomy & histology Rats Spherical harmonics Spinal Cord - anatomy & histology Standard deviation Tensor Ultrasonography |
title | Resolution of complex tissue microarchitecture using the diffusion orientation transform (DOT) |
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