Olleya marilimosa gen. nov., sp. nov., an exopolysaccharide-producing marine bacterium from the family Flavobacteriaceae, isolated from the Southern Ocean
1 School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia 2 Australian Food Safety Center of Excellence, University of Tasmania, Hobart, Tasmania, Australia 3 Institut Français de Recherche pour l'Exploitation de la Mer, Centre de Brest, DRV/VP/BMM, Plouzané, France...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2005-07, Vol.55 (4), p.1557-1561 |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Nichols, Carol Mancuso Bowman, John P Guezennec, Jean |
| description | 1 School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia
2 Australian Food Safety Center of Excellence, University of Tasmania, Hobart, Tasmania, Australia
3 Institut Français de Recherche pour l'Exploitation de la Mer, Centre de Brest, DRV/VP/BMM, Plouzané, France
Correspondence Carol Mancuso Nichols C.A.Mancuso{at}utas.edu.au
A Gram-negative, aerobic, gliding, orangeyellow marine bacterium was isolated from particulate material sampled from the Southern Ocean. This strain produced an exopolysaccharide in liquid culture. 16S rRNA gene sequence analysis showed that this isolate was a member of the family Flavobacteriaceae , but represented a separate lineage. Major whole-cell fatty acids included i15 : 1 10 c , i15 : 0, -OH i15 : 0, a15 : 1 10 c , 15 : 0 and -OH i15 : 0. The G+C content of the DNA was 49 mol%. Based on phylogenetic, phenotypic, chemotaxonomic and genotypic analyses, this bacterium was placed in a novel taxon as Olleya marilimosa gen. nov., sp. nov. with type strain CAM030 T (=ACAM 1065 T =CIP 108537 T ).
Abbreviations: EPS, exopolysaccharides
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain CAM030 T is AY586527 .
The whole-cell fatty acid profile of CAM030 T compared with those of related genera is available as a supplementary table in IJSEM Online. |
| doi_str_mv | 10.1099/ijs.0.63642-0 |
| format | Article |
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2 Australian Food Safety Center of Excellence, University of Tasmania, Hobart, Tasmania, Australia
3 Institut Français de Recherche pour l'Exploitation de la Mer, Centre de Brest, DRV/VP/BMM, Plouzané, France
Correspondence Carol Mancuso Nichols C.A.Mancuso{at}utas.edu.au
A Gram-negative, aerobic, gliding, orangeyellow marine bacterium was isolated from particulate material sampled from the Southern Ocean. This strain produced an exopolysaccharide in liquid culture. 16S rRNA gene sequence analysis showed that this isolate was a member of the family Flavobacteriaceae , but represented a separate lineage. Major whole-cell fatty acids included i15 : 1 10 c , i15 : 0, -OH i15 : 0, a15 : 1 10 c , 15 : 0 and -OH i15 : 0. The G+C content of the DNA was 49 mol%. Based on phylogenetic, phenotypic, chemotaxonomic and genotypic analyses, this bacterium was placed in a novel taxon as Olleya marilimosa gen. nov., sp. nov. with type strain CAM030 T (=ACAM 1065 T =CIP 108537 T ).
Abbreviations: EPS, exopolysaccharides
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain CAM030 T is AY586527 .
The whole-cell fatty acid profile of CAM030 T compared with those of related genera is available as a supplementary table in IJSEM Online.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.63642-0</identifier><identifier>PMID: 16014481</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Bacterial Typing Techniques ; Bacteriology ; Base Composition ; Biological and medical sciences ; DNA, Bacterial - analysis ; DNA, Ribosomal - analysis ; Flavobacteriaceae - chemistry ; Flavobacteriaceae - classification ; Flavobacteriaceae - genetics ; Flavobacteriaceae - isolation & purification ; Fundamental and applied biological sciences. Psychology ; Genes, rRNA ; Genotype ; Marine ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Phenotype ; Phylogeny ; Polysaccharides, Bacterial - biosynthesis ; RNA, Ribosomal, 16S - genetics ; Seawater - microbiology ; Sequence Analysis, DNA ; Species Specificity ; Systematics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2005-07, Vol.55 (4), p.1557-1561</ispartof><rights>2006 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c490t-440fd0b2279d6961eecb9d2bd53f9ba7adac2700af32237bebe703cece50a23</citedby><cites>FETCH-LOGICAL-c490t-440fd0b2279d6961eecb9d2bd53f9ba7adac2700af32237bebe703cece50a23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,781,785,3747,3748,27926,27927</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=16945240$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16014481$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nichols, Carol Mancuso</creatorcontrib><creatorcontrib>Bowman, John P</creatorcontrib><creatorcontrib>Guezennec, Jean</creatorcontrib><title>Olleya marilimosa gen. nov., sp. nov., an exopolysaccharide-producing marine bacterium from the family Flavobacteriaceae, isolated from the Southern Ocean</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia
2 Australian Food Safety Center of Excellence, University of Tasmania, Hobart, Tasmania, Australia
3 Institut Français de Recherche pour l'Exploitation de la Mer, Centre de Brest, DRV/VP/BMM, Plouzané, France
Correspondence Carol Mancuso Nichols C.A.Mancuso{at}utas.edu.au
A Gram-negative, aerobic, gliding, orangeyellow marine bacterium was isolated from particulate material sampled from the Southern Ocean. This strain produced an exopolysaccharide in liquid culture. 16S rRNA gene sequence analysis showed that this isolate was a member of the family Flavobacteriaceae , but represented a separate lineage. Major whole-cell fatty acids included i15 : 1 10 c , i15 : 0, -OH i15 : 0, a15 : 1 10 c , 15 : 0 and -OH i15 : 0. The G+C content of the DNA was 49 mol%. Based on phylogenetic, phenotypic, chemotaxonomic and genotypic analyses, this bacterium was placed in a novel taxon as Olleya marilimosa gen. nov., sp. nov. with type strain CAM030 T (=ACAM 1065 T =CIP 108537 T ).
Abbreviations: EPS, exopolysaccharides
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain CAM030 T is AY586527 .
The whole-cell fatty acid profile of CAM030 T compared with those of related genera is available as a supplementary table in IJSEM Online.</description><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>DNA, Bacterial - analysis</subject><subject>DNA, Ribosomal - analysis</subject><subject>Flavobacteriaceae - chemistry</subject><subject>Flavobacteriaceae - classification</subject><subject>Flavobacteriaceae - genetics</subject><subject>Flavobacteriaceae - isolation & purification</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes, rRNA</subject><subject>Genotype</subject><subject>Marine</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>Polysaccharides, Bacterial - biosynthesis</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Seawater - microbiology</subject><subject>Sequence Analysis, DNA</subject><subject>Species Specificity</subject><subject>Systematics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0U1v1DAQBuAIUdFSOHJFvlBxaMLEcZz6iCoKSJX2UO7WxJnsunLixU5K96_019bbDZRbTx7Zj8cfb5Z9KKEoQakv9jYWUMhKCp7Dq-ykFFLmNVTi9b-ay-PsbYy3AGkC4E12XMpUiovyJHtYOUc7ZAMG6-zgI7I1jQUb_V1xzuL2b4Ujo3u_9W4X0ZhN0h3l2-C72dhx_bR9JNaimSjYeWB98AObNsR6HKzbsSuHd35ZRkNI58xG73Ci7tne-DkNYWSrJMZ32VGPLtL7ZTzNbq6-_br8kV-vvv-8_HqdG6FgyoWAvoOW80Z1UsmSyLSq421XV71qscEODW8AsK84r5qWWmqgMmSoBuTVaXZ26Joe83umOOnBRkPO4Uh-jlpeAK-VFC_CspFcNWIP8wM0wccYqNfbYNMH7XQJep-ZTplp0E-ZaUj-49J4bgfqnvUSUgKfFoDRoOsDjsbG_5wSNRf7Rp8PbmPXmz82kE5RDjZdo7V-f2hda6HLum6qR97XsH0</recordid><startdate>20050701</startdate><enddate>20050701</enddate><creator>Nichols, Carol Mancuso</creator><creator>Bowman, John P</creator><creator>Guezennec, Jean</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20050701</creationdate><title>Olleya marilimosa gen. nov., sp. nov., an exopolysaccharide-producing marine bacterium from the family Flavobacteriaceae, isolated from the Southern Ocean</title><author>Nichols, Carol Mancuso ; Bowman, John P ; Guezennec, Jean</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c490t-440fd0b2279d6961eecb9d2bd53f9ba7adac2700af32237bebe703cece50a23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>DNA, Bacterial - analysis</topic><topic>DNA, Ribosomal - analysis</topic><topic>Flavobacteriaceae - chemistry</topic><topic>Flavobacteriaceae - classification</topic><topic>Flavobacteriaceae - genetics</topic><topic>Flavobacteriaceae - isolation & purification</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes, rRNA</topic><topic>Genotype</topic><topic>Marine</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>Polysaccharides, Bacterial - biosynthesis</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Seawater - microbiology</topic><topic>Sequence Analysis, DNA</topic><topic>Species Specificity</topic><topic>Systematics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nichols, Carol Mancuso</creatorcontrib><creatorcontrib>Bowman, John P</creatorcontrib><creatorcontrib>Guezennec, Jean</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nichols, Carol Mancuso</au><au>Bowman, John P</au><au>Guezennec, Jean</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Olleya marilimosa gen. nov., sp. nov., an exopolysaccharide-producing marine bacterium from the family Flavobacteriaceae, isolated from the Southern Ocean</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2005-07-01</date><risdate>2005</risdate><volume>55</volume><issue>4</issue><spage>1557</spage><epage>1561</epage><pages>1557-1561</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 School of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia
2 Australian Food Safety Center of Excellence, University of Tasmania, Hobart, Tasmania, Australia
3 Institut Français de Recherche pour l'Exploitation de la Mer, Centre de Brest, DRV/VP/BMM, Plouzané, France
Correspondence Carol Mancuso Nichols C.A.Mancuso{at}utas.edu.au
A Gram-negative, aerobic, gliding, orangeyellow marine bacterium was isolated from particulate material sampled from the Southern Ocean. This strain produced an exopolysaccharide in liquid culture. 16S rRNA gene sequence analysis showed that this isolate was a member of the family Flavobacteriaceae , but represented a separate lineage. Major whole-cell fatty acids included i15 : 1 10 c , i15 : 0, -OH i15 : 0, a15 : 1 10 c , 15 : 0 and -OH i15 : 0. The G+C content of the DNA was 49 mol%. Based on phylogenetic, phenotypic, chemotaxonomic and genotypic analyses, this bacterium was placed in a novel taxon as Olleya marilimosa gen. nov., sp. nov. with type strain CAM030 T (=ACAM 1065 T =CIP 108537 T ).
Abbreviations: EPS, exopolysaccharides
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain CAM030 T is AY586527 .
The whole-cell fatty acid profile of CAM030 T compared with those of related genera is available as a supplementary table in IJSEM Online.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>16014481</pmid><doi>10.1099/ijs.0.63642-0</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Bacterial Typing Techniques Bacteriology Base Composition Biological and medical sciences DNA, Bacterial - analysis DNA, Ribosomal - analysis Flavobacteriaceae - chemistry Flavobacteriaceae - classification Flavobacteriaceae - genetics Flavobacteriaceae - isolation & purification Fundamental and applied biological sciences. Psychology Genes, rRNA Genotype Marine Microbiology Miscellaneous Molecular Sequence Data Phenotype Phylogeny Polysaccharides, Bacterial - biosynthesis RNA, Ribosomal, 16S - genetics Seawater - microbiology Sequence Analysis, DNA Species Specificity Systematics |
| title | Olleya marilimosa gen. nov., sp. nov., an exopolysaccharide-producing marine bacterium from the family Flavobacteriaceae, isolated from the Southern Ocean |
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