Polymorphisms of XRCC1 gene, alcohol consumption and colorectal cancer
To evaluate contribution of polymorphisms of the XRCC1 gene to the risk of colorectal cancer, we conducted a case‐control study of 209 colorectal cancer cases and 209 age‐ and gender‐matched controls in the Korean population. We tested the hypothesis by constructing allele combinations with known SN...
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description | To evaluate contribution of polymorphisms of the XRCC1 gene to the risk of colorectal cancer, we conducted a case‐control study of 209 colorectal cancer cases and 209 age‐ and gender‐matched controls in the Korean population. We tested the hypothesis by constructing allele combinations with known SNP. Allelic variants of the XRCC1 gene at codons 194, 280 and 399 were analyzed in lymphocyte DNA by PCR‐RFLP. We observed an increased risk of colorectal cancer associated with the 399Gln allele. The odds ratio (OR) was 1.61 (95% confidence interval [CI] 1.09–2.39) for the 399Gln allele. When combined allele‐specific OR were calculated after estimating frequencies, 3 common allele combinations were found to be associated with an increased risk of colorectal cancer. The OR for the 194Trp‐280Arg‐399Arg was 1.48 (95% CI = 1.06–2.07) using 194Arg‐280Arg‐399Arg as the reference. The OR for the 194Arg‐280His‐399Arg and the 194Arg‐280Arg‐399Gln were 1.78 (95% CI = 1.09–2.89) and 1.78 (95% CI = 1.23–2.59), respectively. Analysis after controlling for smoking, exercise and dietary habits indicated that alcohol consumption (≥80 g/week) is a significant risk factor of colorectal cancer (OR = 2.60, 95% CI = 1.46–4.62). An increased risk for colorectal cancer was identified in alcohol drinkers with the risky allele combinations. Our results suggest that polymorphisms in the XRCC1 genes may contribute to colorectal cancer susceptibility, and some evidence was obtained of a genetic modification for the relationship between alcohol intake and colorectal cancer. © 2005 Wiley‐Liss, Inc. |
doi_str_mv | 10.1002/ijc.21019 |
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We tested the hypothesis by constructing allele combinations with known SNP. Allelic variants of the XRCC1 gene at codons 194, 280 and 399 were analyzed in lymphocyte DNA by PCR‐RFLP. We observed an increased risk of colorectal cancer associated with the 399Gln allele. The odds ratio (OR) was 1.61 (95% confidence interval [CI] 1.09–2.39) for the 399Gln allele. When combined allele‐specific OR were calculated after estimating frequencies, 3 common allele combinations were found to be associated with an increased risk of colorectal cancer. The OR for the 194Trp‐280Arg‐399Arg was 1.48 (95% CI = 1.06–2.07) using 194Arg‐280Arg‐399Arg as the reference. The OR for the 194Arg‐280His‐399Arg and the 194Arg‐280Arg‐399Gln were 1.78 (95% CI = 1.09–2.89) and 1.78 (95% CI = 1.23–2.59), respectively. Analysis after controlling for smoking, exercise and dietary habits indicated that alcohol consumption (≥80 g/week) is a significant risk factor of colorectal cancer (OR = 2.60, 95% CI = 1.46–4.62). An increased risk for colorectal cancer was identified in alcohol drinkers with the risky allele combinations. Our results suggest that polymorphisms in the XRCC1 genes may contribute to colorectal cancer susceptibility, and some evidence was obtained of a genetic modification for the relationship between alcohol intake and colorectal cancer. © 2005 Wiley‐Liss, Inc.</description><identifier>ISSN: 0020-7136</identifier><identifier>EISSN: 1097-0215</identifier><identifier>DOI: 10.1002/ijc.21019</identifier><identifier>PMID: 15800946</identifier><identifier>CODEN: IJCNAW</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc., A Wiley Company</publisher><subject>Aged ; alcohol ; Alcohol Drinking - adverse effects ; allele ; Biological and medical sciences ; Case-Control Studies ; colorectal cancer ; Colorectal Neoplasms - etiology ; Colorectal Neoplasms - genetics ; DNA Repair ; DNA-Binding Proteins - genetics ; Female ; Gastroenterology. Liver. Pancreas. Abdomen ; Genetic Predisposition to Disease ; genotype ; Humans ; Male ; Medical sciences ; Middle Aged ; Odds Ratio ; Polymorphism, Single Nucleotide ; polymorphisms ; Risk Factors ; Stomach. Duodenum. Small intestine. Colon. Rectum. Anus ; Tropical medicine ; Tumors ; X-ray Repair Cross Complementing Protein 1 ; XRCC1</subject><ispartof>International journal of cancer, 2005-09, Vol.116 (3), p.428-432</ispartof><rights>Copyright © 2005 Wiley‐Liss, Inc.</rights><rights>2005 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4509-6823a640af00662eb560c4f196ec656ba0cc8c946baedf285094504430ac95de3</citedby><cites>FETCH-LOGICAL-c4509-6823a640af00662eb560c4f196ec656ba0cc8c946baedf285094504430ac95de3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fijc.21019$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fijc.21019$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=16948115$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15800946$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hong, Yun‐Chul</creatorcontrib><creatorcontrib>Lee, Kwan‐Hee</creatorcontrib><creatorcontrib>Kim, Woo‐Chul</creatorcontrib><creatorcontrib>Choi, Sun‐Keun</creatorcontrib><creatorcontrib>Woo, Ze‐Hong</creatorcontrib><creatorcontrib>Shin, Soo‐Kyung</creatorcontrib><creatorcontrib>Kim, Ho</creatorcontrib><title>Polymorphisms of XRCC1 gene, alcohol consumption and colorectal cancer</title><title>International journal of cancer</title><addtitle>Int J Cancer</addtitle><description>To evaluate contribution of polymorphisms of the XRCC1 gene to the risk of colorectal cancer, we conducted a case‐control study of 209 colorectal cancer cases and 209 age‐ and gender‐matched controls in the Korean population. We tested the hypothesis by constructing allele combinations with known SNP. Allelic variants of the XRCC1 gene at codons 194, 280 and 399 were analyzed in lymphocyte DNA by PCR‐RFLP. We observed an increased risk of colorectal cancer associated with the 399Gln allele. The odds ratio (OR) was 1.61 (95% confidence interval [CI] 1.09–2.39) for the 399Gln allele. When combined allele‐specific OR were calculated after estimating frequencies, 3 common allele combinations were found to be associated with an increased risk of colorectal cancer. The OR for the 194Trp‐280Arg‐399Arg was 1.48 (95% CI = 1.06–2.07) using 194Arg‐280Arg‐399Arg as the reference. The OR for the 194Arg‐280His‐399Arg and the 194Arg‐280Arg‐399Gln were 1.78 (95% CI = 1.09–2.89) and 1.78 (95% CI = 1.23–2.59), respectively. Analysis after controlling for smoking, exercise and dietary habits indicated that alcohol consumption (≥80 g/week) is a significant risk factor of colorectal cancer (OR = 2.60, 95% CI = 1.46–4.62). An increased risk for colorectal cancer was identified in alcohol drinkers with the risky allele combinations. Our results suggest that polymorphisms in the XRCC1 genes may contribute to colorectal cancer susceptibility, and some evidence was obtained of a genetic modification for the relationship between alcohol intake and colorectal cancer. © 2005 Wiley‐Liss, Inc.</description><subject>Aged</subject><subject>alcohol</subject><subject>Alcohol Drinking - adverse effects</subject><subject>allele</subject><subject>Biological and medical sciences</subject><subject>Case-Control Studies</subject><subject>colorectal cancer</subject><subject>Colorectal Neoplasms - etiology</subject><subject>Colorectal Neoplasms - genetics</subject><subject>DNA Repair</subject><subject>DNA-Binding Proteins - genetics</subject><subject>Female</subject><subject>Gastroenterology. Liver. Pancreas. Abdomen</subject><subject>Genetic Predisposition to Disease</subject><subject>genotype</subject><subject>Humans</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Middle Aged</subject><subject>Odds Ratio</subject><subject>Polymorphism, Single Nucleotide</subject><subject>polymorphisms</subject><subject>Risk Factors</subject><subject>Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</subject><subject>Tropical medicine</subject><subject>Tumors</subject><subject>X-ray Repair Cross Complementing Protein 1</subject><subject>XRCC1</subject><issn>0020-7136</issn><issn>1097-0215</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc9LwzAUgIMobk4P_gPSi4Jgt5c2TZujFKeTgSIK3kKapq4jbWayIvvvjbawk3h6PN73fvA9hM4xTDFANKvXchphwOwAjTGwNIQIJ4do7GsQpjimI3Ti3BoA4wTIMRrhJANghI7R_NnoXWPsZlW7xgWmCt5f8hwHH6pVN4HQ0qyMDqRpXddstrVpA9GWPtfGKrkVviRaqewpOqqEdupsiBP0Nr97zR_C5dP9Ir9dhpIkwEKaRbGgBEQFQGmkioSCJBVmVEma0EKAlJn0hxVClVWU-R7fR0gMQrKkVPEEXfVzN9Z8dspteVM7qbQWrTKd4zRlJCJx-i-IU8K8MurB6x6U1jhnVcU3tm6E3XEM_Mcu93b5r13PXgxDu6JR5Z4cdHrgcgCEk0JX1sup3Z6jjGT-B56b9dxXrdXu74188Zj3q78B4PCO2g</recordid><startdate>20050901</startdate><enddate>20050901</enddate><creator>Hong, Yun‐Chul</creator><creator>Lee, Kwan‐Hee</creator><creator>Kim, Woo‐Chul</creator><creator>Choi, Sun‐Keun</creator><creator>Woo, Ze‐Hong</creator><creator>Shin, Soo‐Kyung</creator><creator>Kim, Ho</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><general>Wiley-Liss</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7U1</scope><scope>7U2</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20050901</creationdate><title>Polymorphisms of XRCC1 gene, alcohol consumption and colorectal cancer</title><author>Hong, Yun‐Chul ; Lee, Kwan‐Hee ; Kim, Woo‐Chul ; Choi, Sun‐Keun ; Woo, Ze‐Hong ; Shin, Soo‐Kyung ; Kim, Ho</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4509-6823a640af00662eb560c4f196ec656ba0cc8c946baedf285094504430ac95de3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Aged</topic><topic>alcohol</topic><topic>Alcohol Drinking - adverse effects</topic><topic>allele</topic><topic>Biological and medical sciences</topic><topic>Case-Control Studies</topic><topic>colorectal cancer</topic><topic>Colorectal Neoplasms - etiology</topic><topic>Colorectal Neoplasms - genetics</topic><topic>DNA Repair</topic><topic>DNA-Binding Proteins - genetics</topic><topic>Female</topic><topic>Gastroenterology. Liver. Pancreas. Abdomen</topic><topic>Genetic Predisposition to Disease</topic><topic>genotype</topic><topic>Humans</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Middle Aged</topic><topic>Odds Ratio</topic><topic>Polymorphism, Single Nucleotide</topic><topic>polymorphisms</topic><topic>Risk Factors</topic><topic>Stomach. Duodenum. Small intestine. Colon. Rectum. Anus</topic><topic>Tropical medicine</topic><topic>Tumors</topic><topic>X-ray Repair Cross Complementing Protein 1</topic><topic>XRCC1</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hong, Yun‐Chul</creatorcontrib><creatorcontrib>Lee, Kwan‐Hee</creatorcontrib><creatorcontrib>Kim, Woo‐Chul</creatorcontrib><creatorcontrib>Choi, Sun‐Keun</creatorcontrib><creatorcontrib>Woo, Ze‐Hong</creatorcontrib><creatorcontrib>Shin, Soo‐Kyung</creatorcontrib><creatorcontrib>Kim, Ho</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Risk Abstracts</collection><collection>Safety Science and Risk</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of cancer</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hong, Yun‐Chul</au><au>Lee, Kwan‐Hee</au><au>Kim, Woo‐Chul</au><au>Choi, Sun‐Keun</au><au>Woo, Ze‐Hong</au><au>Shin, Soo‐Kyung</au><au>Kim, Ho</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Polymorphisms of XRCC1 gene, alcohol consumption and colorectal cancer</atitle><jtitle>International journal of cancer</jtitle><addtitle>Int J Cancer</addtitle><date>2005-09-01</date><risdate>2005</risdate><volume>116</volume><issue>3</issue><spage>428</spage><epage>432</epage><pages>428-432</pages><issn>0020-7136</issn><eissn>1097-0215</eissn><coden>IJCNAW</coden><abstract>To evaluate contribution of polymorphisms of the XRCC1 gene to the risk of colorectal cancer, we conducted a case‐control study of 209 colorectal cancer cases and 209 age‐ and gender‐matched controls in the Korean population. We tested the hypothesis by constructing allele combinations with known SNP. Allelic variants of the XRCC1 gene at codons 194, 280 and 399 were analyzed in lymphocyte DNA by PCR‐RFLP. We observed an increased risk of colorectal cancer associated with the 399Gln allele. The odds ratio (OR) was 1.61 (95% confidence interval [CI] 1.09–2.39) for the 399Gln allele. When combined allele‐specific OR were calculated after estimating frequencies, 3 common allele combinations were found to be associated with an increased risk of colorectal cancer. The OR for the 194Trp‐280Arg‐399Arg was 1.48 (95% CI = 1.06–2.07) using 194Arg‐280Arg‐399Arg as the reference. The OR for the 194Arg‐280His‐399Arg and the 194Arg‐280Arg‐399Gln were 1.78 (95% CI = 1.09–2.89) and 1.78 (95% CI = 1.23–2.59), respectively. Analysis after controlling for smoking, exercise and dietary habits indicated that alcohol consumption (≥80 g/week) is a significant risk factor of colorectal cancer (OR = 2.60, 95% CI = 1.46–4.62). An increased risk for colorectal cancer was identified in alcohol drinkers with the risky allele combinations. Our results suggest that polymorphisms in the XRCC1 genes may contribute to colorectal cancer susceptibility, and some evidence was obtained of a genetic modification for the relationship between alcohol intake and colorectal cancer. © 2005 Wiley‐Liss, Inc.</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc., A Wiley Company</pub><pmid>15800946</pmid><doi>10.1002/ijc.21019</doi><tpages>5</tpages></addata></record> |
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subjects | Aged alcohol Alcohol Drinking - adverse effects allele Biological and medical sciences Case-Control Studies colorectal cancer Colorectal Neoplasms - etiology Colorectal Neoplasms - genetics DNA Repair DNA-Binding Proteins - genetics Female Gastroenterology. Liver. Pancreas. Abdomen Genetic Predisposition to Disease genotype Humans Male Medical sciences Middle Aged Odds Ratio Polymorphism, Single Nucleotide polymorphisms Risk Factors Stomach. Duodenum. Small intestine. Colon. Rectum. Anus Tropical medicine Tumors X-ray Repair Cross Complementing Protein 1 XRCC1 |
title | Polymorphisms of XRCC1 gene, alcohol consumption and colorectal cancer |
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