Proteomic analysis of nasal cells from cystic fibrosis patients and non-cystic fibrosis control individuals: Search for novel biomarkers of cystic fibrosis lung disease
Potential biological markers for cystic fibrosis (CF) lung disease were identified by comparative proteomics profiling of nasal cells from deletion of phenylalanine residue 508 (F508del)‐homozygous CF patients and non‐CF controls. From the non‐CF 2‐DE gels, 65 spots were identified by MS, and a refe...
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description | Potential biological markers for cystic fibrosis (CF) lung disease were identified by comparative proteomics profiling of nasal cells from deletion of phenylalanine residue 508 (F508del)‐homozygous CF patients and non‐CF controls. From the non‐CF 2‐DE gels, 65 spots were identified by MS, and a reference 2‐DE map was thus established. The majority of those correspond to ubiquitously expressed proteins. Consistent with the epithelial origin of this tissue, some of the identified proteins are epithelial markers (e.g. cytokeratins, palate lung and nasal epithelium clone protein (PLUNC), and squamous cell carcinoma antigen 1). Comparison of this protein profile with the one similarly obtained for CF nasal cells revealed a set of differentially expressed proteins. These included proteins related to chronic inflammation and some others involved in oxidative stress injury. Alterations were also observed in the levels of cytoskeleton proteins, being probably implicated with cytoskeleton organization changes described to occur in CF‐airways. Lower levels were found for some mitochondrial proteins suggesting an altered mitochondrial metabolism in CF. Differential expression was also found for two more enzymes that have not been previously associated to CF. Further studies will clarify the involvement of such proteins in CF pathophysiology and whether they are targets for CF therapy. |
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From the non‐CF 2‐DE gels, 65 spots were identified by MS, and a reference 2‐DE map was thus established. The majority of those correspond to ubiquitously expressed proteins. Consistent with the epithelial origin of this tissue, some of the identified proteins are epithelial markers (e.g. cytokeratins, palate lung and nasal epithelium clone protein (PLUNC), and squamous cell carcinoma antigen 1). Comparison of this protein profile with the one similarly obtained for CF nasal cells revealed a set of differentially expressed proteins. These included proteins related to chronic inflammation and some others involved in oxidative stress injury. Alterations were also observed in the levels of cytoskeleton proteins, being probably implicated with cytoskeleton organization changes described to occur in CF‐airways. Lower levels were found for some mitochondrial proteins suggesting an altered mitochondrial metabolism in CF. Differential expression was also found for two more enzymes that have not been previously associated to CF. Further studies will clarify the involvement of such proteins in CF pathophysiology and whether they are targets for CF therapy.</description><identifier>ISSN: 1615-9853</identifier><identifier>EISSN: 1615-9861</identifier><identifier>DOI: 10.1002/pmic.200500273</identifier><identifier>PMID: 16518875</identifier><language>eng</language><publisher>Weinheim: WILEY-VCH Verlag</publisher><subject>Adolescent ; Adult ; Analytical, structural and metabolic biochemistry ; Biological and medical sciences ; Biomarkers ; Biomarkers - chemistry ; Biomarkers - metabolism ; Cystic Fibrosis ; Cystic Fibrosis - metabolism ; Cystic Fibrosis - pathology ; Electrophoresis, Gel, Two-Dimensional ; Errors of metabolism ; Female ; Fundamental and applied biological sciences. Psychology ; Humans ; Lung disease ; Male ; Medical sciences ; Metabolic diseases ; Miscellaneous ; Miscellaneous hereditary metabolic disorders ; Nasal cells ; Nasal Mucosa - chemistry ; Nasal Mucosa - cytology ; Nasal Mucosa - metabolism ; Nasal Mucosa - pathology ; Pneumology ; Proteins ; Proteome - biosynthesis ; Proteome - chemistry ; Proteome - metabolism ; Respiratory system : syndromes and miscellaneous diseases</subject><ispartof>Proteomics (Weinheim), 2006-04, Vol.6 (7), p.2314-2325</ispartof><rights>Copyright © 2006 WILEY‐VCH Verlag GmbH & Co. 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From the non‐CF 2‐DE gels, 65 spots were identified by MS, and a reference 2‐DE map was thus established. The majority of those correspond to ubiquitously expressed proteins. Consistent with the epithelial origin of this tissue, some of the identified proteins are epithelial markers (e.g. cytokeratins, palate lung and nasal epithelium clone protein (PLUNC), and squamous cell carcinoma antigen 1). Comparison of this protein profile with the one similarly obtained for CF nasal cells revealed a set of differentially expressed proteins. These included proteins related to chronic inflammation and some others involved in oxidative stress injury. Alterations were also observed in the levels of cytoskeleton proteins, being probably implicated with cytoskeleton organization changes described to occur in CF‐airways. Lower levels were found for some mitochondrial proteins suggesting an altered mitochondrial metabolism in CF. Differential expression was also found for two more enzymes that have not been previously associated to CF. Further studies will clarify the involvement of such proteins in CF pathophysiology and whether they are targets for CF therapy.</description><subject>Adolescent</subject><subject>Adult</subject><subject>Analytical, structural and metabolic biochemistry</subject><subject>Biological and medical sciences</subject><subject>Biomarkers</subject><subject>Biomarkers - chemistry</subject><subject>Biomarkers - metabolism</subject><subject>Cystic Fibrosis</subject><subject>Cystic Fibrosis - metabolism</subject><subject>Cystic Fibrosis - pathology</subject><subject>Electrophoresis, Gel, Two-Dimensional</subject><subject>Errors of metabolism</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Humans</subject><subject>Lung disease</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Metabolic diseases</subject><subject>Miscellaneous</subject><subject>Miscellaneous hereditary metabolic disorders</subject><subject>Nasal cells</subject><subject>Nasal Mucosa - chemistry</subject><subject>Nasal Mucosa - cytology</subject><subject>Nasal Mucosa - metabolism</subject><subject>Nasal Mucosa - pathology</subject><subject>Pneumology</subject><subject>Proteins</subject><subject>Proteome - biosynthesis</subject><subject>Proteome - chemistry</subject><subject>Proteome - metabolism</subject><subject>Respiratory system : syndromes and miscellaneous diseases</subject><issn>1615-9853</issn><issn>1615-9861</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU9v1DAQxSMEoqVw5Yh8gVsWTxz_CTdYsaXSApUA9Wh5HRsMjr21k8J-Iz4mDrvaol442db83psZv6p6CngBGDcvt4PTiwZjWh6c3KtOgQGtO8Hg_vFOyUn1KOfvGAMXHX9YnQCjIASnp9XvyxRHE4sLUkH5XXYZRYuCysojbbzPyKY4IL3LY2Gs26Q4M1s1OhPGXFQ9CjHUdwEdw5iiRy707sb1k_L5FfpkVNLfkI2paG6MRxsXB5V-mPS3610PP4WvqHfZqGweVw9s8TBPDudZ9WX19vPyXb3-eH6xfL2udQtAaqYp76kRRGBMLKOWc80E9F3bdgQwM7ZrDLOWg9ClrDuqhBaYEtC8NU1HzqoXe99titeTyaMcXJ4_QgUTpywZFwAdZwVc7EFdhs3JWLlNriyzk4DlnI2cs5HHbIrg2cF52gymv8UPYRTg-QFQWStvkwra5VuOsxZIM3fu9txP583uP23l5fuL5b9D1Huty6P5ddSWDMpmhFN59eFcvoHl6moNXK7IH38Uuw4</recordid><startdate>20060401</startdate><enddate>20060401</enddate><creator>Roxo-Rosa, Mónica</creator><creator>da Costa, Gonçalo</creator><creator>Luider, Theo M.</creator><creator>Scholte, Bob J.</creator><creator>Coelho, Ana V.</creator><creator>Amaral, Margarida D.</creator><creator>Penque, Deborah</creator><general>WILEY-VCH Verlag</general><general>WILEY‐VCH Verlag</general><general>Wiley-VCH</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20060401</creationdate><title>Proteomic analysis of nasal cells from cystic fibrosis patients and non-cystic fibrosis control individuals: Search for novel biomarkers of cystic fibrosis lung disease</title><author>Roxo-Rosa, Mónica ; da Costa, Gonçalo ; Luider, Theo M. ; Scholte, Bob J. ; Coelho, Ana V. ; Amaral, Margarida D. ; Penque, Deborah</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4113-6c57d5e838003f65f77c681d94493106ef92e6ff718cf65c95a8c80531c74e293</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Adolescent</topic><topic>Adult</topic><topic>Analytical, structural and metabolic biochemistry</topic><topic>Biological and medical sciences</topic><topic>Biomarkers</topic><topic>Biomarkers - chemistry</topic><topic>Biomarkers - metabolism</topic><topic>Cystic Fibrosis</topic><topic>Cystic Fibrosis - metabolism</topic><topic>Cystic Fibrosis - pathology</topic><topic>Electrophoresis, Gel, Two-Dimensional</topic><topic>Errors of metabolism</topic><topic>Female</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Humans</topic><topic>Lung disease</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Metabolic diseases</topic><topic>Miscellaneous</topic><topic>Miscellaneous hereditary metabolic disorders</topic><topic>Nasal cells</topic><topic>Nasal Mucosa - chemistry</topic><topic>Nasal Mucosa - cytology</topic><topic>Nasal Mucosa - metabolism</topic><topic>Nasal Mucosa - pathology</topic><topic>Pneumology</topic><topic>Proteins</topic><topic>Proteome - biosynthesis</topic><topic>Proteome - chemistry</topic><topic>Proteome - metabolism</topic><topic>Respiratory system : syndromes and miscellaneous diseases</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Roxo-Rosa, Mónica</creatorcontrib><creatorcontrib>da Costa, Gonçalo</creatorcontrib><creatorcontrib>Luider, Theo M.</creatorcontrib><creatorcontrib>Scholte, Bob J.</creatorcontrib><creatorcontrib>Coelho, Ana V.</creatorcontrib><creatorcontrib>Amaral, Margarida D.</creatorcontrib><creatorcontrib>Penque, Deborah</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Proteomics (Weinheim)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Roxo-Rosa, Mónica</au><au>da Costa, Gonçalo</au><au>Luider, Theo M.</au><au>Scholte, Bob J.</au><au>Coelho, Ana V.</au><au>Amaral, Margarida D.</au><au>Penque, Deborah</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Proteomic analysis of nasal cells from cystic fibrosis patients and non-cystic fibrosis control individuals: Search for novel biomarkers of cystic fibrosis lung disease</atitle><jtitle>Proteomics (Weinheim)</jtitle><addtitle>Proteomics</addtitle><date>2006-04-01</date><risdate>2006</risdate><volume>6</volume><issue>7</issue><spage>2314</spage><epage>2325</epage><pages>2314-2325</pages><issn>1615-9853</issn><eissn>1615-9861</eissn><abstract>Potential biological markers for cystic fibrosis (CF) lung disease were identified by comparative proteomics profiling of nasal cells from deletion of phenylalanine residue 508 (F508del)‐homozygous CF patients and non‐CF controls. From the non‐CF 2‐DE gels, 65 spots were identified by MS, and a reference 2‐DE map was thus established. The majority of those correspond to ubiquitously expressed proteins. Consistent with the epithelial origin of this tissue, some of the identified proteins are epithelial markers (e.g. cytokeratins, palate lung and nasal epithelium clone protein (PLUNC), and squamous cell carcinoma antigen 1). Comparison of this protein profile with the one similarly obtained for CF nasal cells revealed a set of differentially expressed proteins. These included proteins related to chronic inflammation and some others involved in oxidative stress injury. Alterations were also observed in the levels of cytoskeleton proteins, being probably implicated with cytoskeleton organization changes described to occur in CF‐airways. Lower levels were found for some mitochondrial proteins suggesting an altered mitochondrial metabolism in CF. Differential expression was also found for two more enzymes that have not been previously associated to CF. Further studies will clarify the involvement of such proteins in CF pathophysiology and whether they are targets for CF therapy.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><pmid>16518875</pmid><doi>10.1002/pmic.200500273</doi><tpages>12</tpages></addata></record> |
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subjects | Adolescent Adult Analytical, structural and metabolic biochemistry Biological and medical sciences Biomarkers Biomarkers - chemistry Biomarkers - metabolism Cystic Fibrosis Cystic Fibrosis - metabolism Cystic Fibrosis - pathology Electrophoresis, Gel, Two-Dimensional Errors of metabolism Female Fundamental and applied biological sciences. Psychology Humans Lung disease Male Medical sciences Metabolic diseases Miscellaneous Miscellaneous hereditary metabolic disorders Nasal cells Nasal Mucosa - chemistry Nasal Mucosa - cytology Nasal Mucosa - metabolism Nasal Mucosa - pathology Pneumology Proteins Proteome - biosynthesis Proteome - chemistry Proteome - metabolism Respiratory system : syndromes and miscellaneous diseases |
title | Proteomic analysis of nasal cells from cystic fibrosis patients and non-cystic fibrosis control individuals: Search for novel biomarkers of cystic fibrosis lung disease |
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