Salegentibacter flavus sp. nov
1 Swinburne University of Technology, PO Box 218, Hawthorn, Victoria 3122, Australia 2 Pacific Institute of Bioorganic Chemistry of the Far-Eastern Branch of the Russian Academy of Sciences, Pr. 100 Let Vladivostoku 159, Russia 3 Department of Agricultural Science, University of Tasmania, Hobart, Ta...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2006-03, Vol.56 (3), p.583-586 |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Ivanova, Elena P Bowman, John P Christen, Richard Zhukova, Natalia V Lysenko, Anatoly M Gorshkova, Natalia M Mitik-Dineva, Natasa Sergeev, Alexander F Mikhailov, Valery V |
| description | 1 Swinburne University of Technology, PO Box 218, Hawthorn, Victoria 3122, Australia
2 Pacific Institute of Bioorganic Chemistry of the Far-Eastern Branch of the Russian Academy of Sciences, Pr. 100 Let Vladivostoku 159, Russia
3 Department of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia
4 UMR6543 CNRS Université de Nice Sophia Antipolis, Centre de Biochimie, Parc Valrose 06108 Nice cedex 2, France
5 Institute of Marine Biology of the Far-Eastern Branch of the Russian Academy of Sciences, 690041 Vladivostok, Russia
6 Institute of Microbiology of the Russian Academy of Sciences, 117811 Moscow, Russia
7 Pacific Oceanological Institute of the Far-Eastern Branch of the Russian Academy of Sciences, Baltiiskaya Str. 43, 690017 Vladivostok, Russia
Correspondence Elena P. Ivanova eivanova{at}swin.edu.au
A yellow-pigmented, non-motile, Gram-negative bacterium, designated Fg 69 T , was isolated from a sediment sample collected in Chazhma Bay (Sea of Japan). The novel organism grew at 1035 °C, was neutrophilic and required 310 % NaCl for optimal growth. Strain Fg 69 T was able to degrade starch and to hydrolyse gelatin and Tween 80 weakly but not casein or agar. Predominant cellular fatty acids comprised n-C 15 and n-C 16 branched-chain and straight-chain saturated and unsaturated fatty acids, including iso-C 15 : 0 (5 %), anteiso-C 15 : 0 (11 %), C 15 : 0 (9 %), iso-C 15 : 1 (5 %), iso-C 16 : 0 (8 %), C 16 : 0 (5 %) and C 16 : 1 7 (5 %) and iso- and anteiso-branched 2-OH and 3-OH C 15 : 0 to C 17 : 0 fatty acids (26 % in total). The G+C content of the DNA was 40·4 mol%. 16S rRNA gene sequence data indicated that strain Fg 69 T belonged to the genus Salegentibacter but was distinct from recognized Salegentibacter species (9495 % sequence similarity). Based on these results, a novel species, Salegentibacter flavus sp. nov., is proposed. The type strain is Fg 69 T (=KMM 6000 T =CIP 107843 T ).
Abbreviations: FAMEs, fatty acid methyl esters
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Fg 69 T is AY682200 . |
| doi_str_mv | 10.1099/ijs.0.64087-0 |
| format | Article |
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2 Pacific Institute of Bioorganic Chemistry of the Far-Eastern Branch of the Russian Academy of Sciences, Pr. 100 Let Vladivostoku 159, Russia
3 Department of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia
4 UMR6543 CNRS Université de Nice Sophia Antipolis, Centre de Biochimie, Parc Valrose 06108 Nice cedex 2, France
5 Institute of Marine Biology of the Far-Eastern Branch of the Russian Academy of Sciences, 690041 Vladivostok, Russia
6 Institute of Microbiology of the Russian Academy of Sciences, 117811 Moscow, Russia
7 Pacific Oceanological Institute of the Far-Eastern Branch of the Russian Academy of Sciences, Baltiiskaya Str. 43, 690017 Vladivostok, Russia
Correspondence Elena P. Ivanova eivanova{at}swin.edu.au
A yellow-pigmented, non-motile, Gram-negative bacterium, designated Fg 69 T , was isolated from a sediment sample collected in Chazhma Bay (Sea of Japan). The novel organism grew at 1035 °C, was neutrophilic and required 310 % NaCl for optimal growth. Strain Fg 69 T was able to degrade starch and to hydrolyse gelatin and Tween 80 weakly but not casein or agar. Predominant cellular fatty acids comprised n-C 15 and n-C 16 branched-chain and straight-chain saturated and unsaturated fatty acids, including iso-C 15 : 0 (5 %), anteiso-C 15 : 0 (11 %), C 15 : 0 (9 %), iso-C 15 : 1 (5 %), iso-C 16 : 0 (8 %), C 16 : 0 (5 %) and C 16 : 1 7 (5 %) and iso- and anteiso-branched 2-OH and 3-OH C 15 : 0 to C 17 : 0 fatty acids (26 % in total). The G+C content of the DNA was 40·4 mol%. 16S rRNA gene sequence data indicated that strain Fg 69 T belonged to the genus Salegentibacter but was distinct from recognized Salegentibacter species (9495 % sequence similarity). Based on these results, a novel species, Salegentibacter flavus sp. nov., is proposed. The type strain is Fg 69 T (=KMM 6000 T =CIP 107843 T ).
Abbreviations: FAMEs, fatty acid methyl esters
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Fg 69 T is AY682200 .</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.64087-0</identifier><identifier>PMID: 16514031</identifier><language>eng</language><publisher>England: Soc General Microbiol</publisher><subject>DNA, Ribosomal - chemistry ; Fatty Acids - analysis ; Flavobacteriaceae - chemistry ; Flavobacteriaceae - classification ; Flavobacteriaceae - genetics ; Geologic Sediments - microbiology ; Phenotype ; Phylogeny ; RNA, Ribosomal, 16S ; Sequence Analysis, DNA</subject><ispartof>International journal of systematic and evolutionary microbiology, 2006-03, Vol.56 (3), p.583-586</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c393t-b3575ccd95b39ac966a5b009d715fe59d6708e195582b31d601791bc1be73d2a3</citedby><cites>FETCH-LOGICAL-c393t-b3575ccd95b39ac966a5b009d715fe59d6708e195582b31d601791bc1be73d2a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,3734,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16514031$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ivanova, Elena P</creatorcontrib><creatorcontrib>Bowman, John P</creatorcontrib><creatorcontrib>Christen, Richard</creatorcontrib><creatorcontrib>Zhukova, Natalia V</creatorcontrib><creatorcontrib>Lysenko, Anatoly M</creatorcontrib><creatorcontrib>Gorshkova, Natalia M</creatorcontrib><creatorcontrib>Mitik-Dineva, Natasa</creatorcontrib><creatorcontrib>Sergeev, Alexander F</creatorcontrib><creatorcontrib>Mikhailov, Valery V</creatorcontrib><title>Salegentibacter flavus sp. nov</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 Swinburne University of Technology, PO Box 218, Hawthorn, Victoria 3122, Australia
2 Pacific Institute of Bioorganic Chemistry of the Far-Eastern Branch of the Russian Academy of Sciences, Pr. 100 Let Vladivostoku 159, Russia
3 Department of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia
4 UMR6543 CNRS Université de Nice Sophia Antipolis, Centre de Biochimie, Parc Valrose 06108 Nice cedex 2, France
5 Institute of Marine Biology of the Far-Eastern Branch of the Russian Academy of Sciences, 690041 Vladivostok, Russia
6 Institute of Microbiology of the Russian Academy of Sciences, 117811 Moscow, Russia
7 Pacific Oceanological Institute of the Far-Eastern Branch of the Russian Academy of Sciences, Baltiiskaya Str. 43, 690017 Vladivostok, Russia
Correspondence Elena P. Ivanova eivanova{at}swin.edu.au
A yellow-pigmented, non-motile, Gram-negative bacterium, designated Fg 69 T , was isolated from a sediment sample collected in Chazhma Bay (Sea of Japan). The novel organism grew at 1035 °C, was neutrophilic and required 310 % NaCl for optimal growth. Strain Fg 69 T was able to degrade starch and to hydrolyse gelatin and Tween 80 weakly but not casein or agar. Predominant cellular fatty acids comprised n-C 15 and n-C 16 branched-chain and straight-chain saturated and unsaturated fatty acids, including iso-C 15 : 0 (5 %), anteiso-C 15 : 0 (11 %), C 15 : 0 (9 %), iso-C 15 : 1 (5 %), iso-C 16 : 0 (8 %), C 16 : 0 (5 %) and C 16 : 1 7 (5 %) and iso- and anteiso-branched 2-OH and 3-OH C 15 : 0 to C 17 : 0 fatty acids (26 % in total). The G+C content of the DNA was 40·4 mol%. 16S rRNA gene sequence data indicated that strain Fg 69 T belonged to the genus Salegentibacter but was distinct from recognized Salegentibacter species (9495 % sequence similarity). Based on these results, a novel species, Salegentibacter flavus sp. nov., is proposed. The type strain is Fg 69 T (=KMM 6000 T =CIP 107843 T ).
Abbreviations: FAMEs, fatty acid methyl esters
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Fg 69 T is AY682200 .</description><subject>DNA, Ribosomal - chemistry</subject><subject>Fatty Acids - analysis</subject><subject>Flavobacteriaceae - chemistry</subject><subject>Flavobacteriaceae - classification</subject><subject>Flavobacteriaceae - genetics</subject><subject>Geologic Sediments - microbiology</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S</subject><subject>Sequence Analysis, DNA</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkD1PwzAQQC0EoqUwsladYEq4i2M7HhHiS6rEAMyW7Titq6QpcVLEv8elFYxMdzo9vZMeIZcIKYKUN34VUkh5DoVI4IiMMec8YUDz49894yNyFsIKIB4ATskIOcMcKI7J9FXXbuHWvTfa9q6bVbXeDmEWNuls3W7PyUml6-AuDnNC3h_u3-6ekvnL4_Pd7TyxVNI-MZQJZm0pmaFSW8m5ZgZAlgJZ5ZgsuYDCoWSsyAzFkgMKicaicYKWmaYTcrX3brr2Y3ChV40P1tW1Xrt2CIoLgVmeF_-Cux9MFDyCyR60XRtC5yq16Xyjuy-FoHblVCynQP2UUxD56UE8mMaVf_QhVQSu98DSL5afvnMqZmt81Bvf7mSMK6pYQek3kkN1Fg</recordid><startdate>20060301</startdate><enddate>20060301</enddate><creator>Ivanova, Elena P</creator><creator>Bowman, John P</creator><creator>Christen, Richard</creator><creator>Zhukova, Natalia V</creator><creator>Lysenko, Anatoly M</creator><creator>Gorshkova, Natalia M</creator><creator>Mitik-Dineva, Natasa</creator><creator>Sergeev, Alexander F</creator><creator>Mikhailov, Valery V</creator><general>Soc General Microbiol</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20060301</creationdate><title>Salegentibacter flavus sp. nov</title><author>Ivanova, Elena P ; Bowman, John P ; Christen, Richard ; Zhukova, Natalia V ; Lysenko, Anatoly M ; Gorshkova, Natalia M ; Mitik-Dineva, Natasa ; Sergeev, Alexander F ; Mikhailov, Valery V</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c393t-b3575ccd95b39ac966a5b009d715fe59d6708e195582b31d601791bc1be73d2a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>DNA, Ribosomal - chemistry</topic><topic>Fatty Acids - analysis</topic><topic>Flavobacteriaceae - chemistry</topic><topic>Flavobacteriaceae - classification</topic><topic>Flavobacteriaceae - genetics</topic><topic>Geologic Sediments - microbiology</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S</topic><topic>Sequence Analysis, DNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ivanova, Elena P</creatorcontrib><creatorcontrib>Bowman, John P</creatorcontrib><creatorcontrib>Christen, Richard</creatorcontrib><creatorcontrib>Zhukova, Natalia V</creatorcontrib><creatorcontrib>Lysenko, Anatoly M</creatorcontrib><creatorcontrib>Gorshkova, Natalia M</creatorcontrib><creatorcontrib>Mitik-Dineva, Natasa</creatorcontrib><creatorcontrib>Sergeev, Alexander F</creatorcontrib><creatorcontrib>Mikhailov, Valery V</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ivanova, Elena P</au><au>Bowman, John P</au><au>Christen, Richard</au><au>Zhukova, Natalia V</au><au>Lysenko, Anatoly M</au><au>Gorshkova, Natalia M</au><au>Mitik-Dineva, Natasa</au><au>Sergeev, Alexander F</au><au>Mikhailov, Valery V</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Salegentibacter flavus sp. nov</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2006-03-01</date><risdate>2006</risdate><volume>56</volume><issue>3</issue><spage>583</spage><epage>586</epage><pages>583-586</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 Swinburne University of Technology, PO Box 218, Hawthorn, Victoria 3122, Australia
2 Pacific Institute of Bioorganic Chemistry of the Far-Eastern Branch of the Russian Academy of Sciences, Pr. 100 Let Vladivostoku 159, Russia
3 Department of Agricultural Science, University of Tasmania, Hobart, Tasmania, Australia
4 UMR6543 CNRS Université de Nice Sophia Antipolis, Centre de Biochimie, Parc Valrose 06108 Nice cedex 2, France
5 Institute of Marine Biology of the Far-Eastern Branch of the Russian Academy of Sciences, 690041 Vladivostok, Russia
6 Institute of Microbiology of the Russian Academy of Sciences, 117811 Moscow, Russia
7 Pacific Oceanological Institute of the Far-Eastern Branch of the Russian Academy of Sciences, Baltiiskaya Str. 43, 690017 Vladivostok, Russia
Correspondence Elena P. Ivanova eivanova{at}swin.edu.au
A yellow-pigmented, non-motile, Gram-negative bacterium, designated Fg 69 T , was isolated from a sediment sample collected in Chazhma Bay (Sea of Japan). The novel organism grew at 1035 °C, was neutrophilic and required 310 % NaCl for optimal growth. Strain Fg 69 T was able to degrade starch and to hydrolyse gelatin and Tween 80 weakly but not casein or agar. Predominant cellular fatty acids comprised n-C 15 and n-C 16 branched-chain and straight-chain saturated and unsaturated fatty acids, including iso-C 15 : 0 (5 %), anteiso-C 15 : 0 (11 %), C 15 : 0 (9 %), iso-C 15 : 1 (5 %), iso-C 16 : 0 (8 %), C 16 : 0 (5 %) and C 16 : 1 7 (5 %) and iso- and anteiso-branched 2-OH and 3-OH C 15 : 0 to C 17 : 0 fatty acids (26 % in total). The G+C content of the DNA was 40·4 mol%. 16S rRNA gene sequence data indicated that strain Fg 69 T belonged to the genus Salegentibacter but was distinct from recognized Salegentibacter species (9495 % sequence similarity). Based on these results, a novel species, Salegentibacter flavus sp. nov., is proposed. The type strain is Fg 69 T (=KMM 6000 T =CIP 107843 T ).
Abbreviations: FAMEs, fatty acid methyl esters
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain Fg 69 T is AY682200 .</abstract><cop>England</cop><pub>Soc General Microbiol</pub><pmid>16514031</pmid><doi>10.1099/ijs.0.64087-0</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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| source | MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection |
| subjects | DNA, Ribosomal - chemistry Fatty Acids - analysis Flavobacteriaceae - chemistry Flavobacteriaceae - classification Flavobacteriaceae - genetics Geologic Sediments - microbiology Phenotype Phylogeny RNA, Ribosomal, 16S Sequence Analysis, DNA |
| title | Salegentibacter flavus sp. nov |
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