Use of housekeeping gene sequencing for species identification of viridans streptococci
Based on the genetic analysis of 20 reference strains, we describe an approach using the sequencing of 2 housekeeping genes, zwf and gki, to identify members of the mitis–sanguinis group of viridans streptococci to the species level, with a better discrimination compared with 16S rDNA sequencing. Th...
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| Veröffentlicht in: | Diagnostic microbiology and infectious disease 2005-04, Vol.51 (4), p.297-301 |
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| container_title | Diagnostic microbiology and infectious disease |
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| creator | Kiratisin, Pattarachai Li, Li Murray, Patrick R. Fischer, Steven H. |
| description | Based on the genetic analysis of 20 reference strains, we describe an approach using the sequencing of 2 housekeeping genes,
zwf and
gki, to identify members of the
mitis–sanguinis group of viridans streptococci to the species level, with a better discrimination compared with 16S rDNA sequencing. This approach also suggested that some reference strains may not be correctly classified. |
| doi_str_mv | 10.1016/j.diagmicrobio.2004.12.001 |
| format | Article |
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gki, to identify members of the
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zwf and
gki, to identify members of the
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| ispartof | Diagnostic microbiology and infectious disease, 2005-04, Vol.51 (4), p.297-301 |
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| language | eng |
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| source | MEDLINE; Access via ScienceDirect (Elsevier) |
| subjects | Bacterial Typing Techniques Biological and medical sciences DNA, Bacterial - analysis Fundamental and applied biological sciences. Psychology gki Glucokinase - genetics Glucosephosphate Dehydrogenase - genetics Housekeeping genes Humans Infectious diseases Medical sciences Microbiology Sequence Analysis, DNA Species Specificity Streptococcus Viridans Streptococci - classification Viridans Streptococci - genetics zwf |
| title | Use of housekeeping gene sequencing for species identification of viridans streptococci |
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