CMfinder—a covariance model based RNA motif finding algorithm

Motivation: The recent discoveries of large numbers of non-coding RNAs and computational advances in genome-scale RNA search create a need for tools for automatic, high quality identification and characterization of conserved RNA motifs that can be readily used for database search. Previous tools fa...

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Veröffentlicht in:	Bioinformatics 2006-02, Vol.22 (4), p.445-452
Hauptverfasser:	Yao, Zizhen, Weinberg, Zasha, Ruzzo, Walter L.
Format:	Artikel
Sprache:	eng
Schlagworte:	Algorithms Base Sequence Biological and medical sciences Computer Simulation Conserved Sequence Fundamental and applied biological sciences. Psychology General aspects Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Models, Genetic Molecular Sequence Data Sequence Alignment - methods Sequence Analysis, RNA - methods Sequence Homology, Nucleic Acid Software Statistics as Topic
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