Molecular Phylogeny and Genetic Identification of Populations of Two Species of Feirana Frogs (Amphibia: Anura, Ranidae, Dicroglossinae, Paini) Endemic to China
Using mitochondrial 12S rRNA, 16S rRNA, and ND2 sequences, we investigated phylogenetic relationships among populations of two frog species endemic to China, both referred to the genus Feirana. A sister-group relationship between the two species was supported moderately in a maximum likelihood analy...
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Veröffentlicht in: | Zoological Science 2009-07, Vol.26 (7), p.500-509 |
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description | Using mitochondrial 12S rRNA, 16S rRNA, and ND2 sequences, we investigated phylogenetic relationships among populations of two frog species endemic to China, both referred to the genus Feirana. A sister-group relationship between the two species was supported moderately in a maximum likelihood analysis and significantly in a Bayesian analysis, but not in a maximum parsimony analysis, of combined data for the three genes. Pending resolution of this incongruence, we provisionally maintain these species in the genus Feirana. Two major clades with a deep divergence are concordant with the species F. quadranus and “F.” taihangnica. In the present work, some populations from the Qinling Mountains and all those from the Funiu and the Zhongtiao-southern Taihang Mountains are referred to “F.” taihangnica rather than F. quadranus, whereas others are referred to F. quadranus. Consequently, the main body of the Qinling Mountains was identified as a large contact zone between these two species. On the basis of phylogenetic relationships and the distribution pattern of populations, we propose a hypothesis for the divergence of “F.” taihangnica: the ancestral species might have inhabited the westernmost Qinling Mountains and dispersed to the main Qinling Mountains, and then to the Zhongtiao-southern Taihang and Funiu Mountains. In contrast, two alternative hypotheses are suggested for F. quadranus: if the two species are confirmed as sister groups, F. quadranus might have dispersed from the westernmost Qinling to the Longmen, Qinling, Daba, and northern Wuling Mountains; alternatively, F. quadranus might have come from the northern Wuling Mountains and then dispersed to the Daba, Qinling, and Longmen mountains. |
doi_str_mv | 10.2108/zsj.26.500 |
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A sister-group relationship between the two species was supported moderately in a maximum likelihood analysis and significantly in a Bayesian analysis, but not in a maximum parsimony analysis, of combined data for the three genes. Pending resolution of this incongruence, we provisionally maintain these species in the genus Feirana. Two major clades with a deep divergence are concordant with the species F. quadranus and “F.” taihangnica. In the present work, some populations from the Qinling Mountains and all those from the Funiu and the Zhongtiao-southern Taihang Mountains are referred to “F.” taihangnica rather than F. quadranus, whereas others are referred to F. quadranus. Consequently, the main body of the Qinling Mountains was identified as a large contact zone between these two species. On the basis of phylogenetic relationships and the distribution pattern of populations, we propose a hypothesis for the divergence of “F.” taihangnica: the ancestral species might have inhabited the westernmost Qinling Mountains and dispersed to the main Qinling Mountains, and then to the Zhongtiao-southern Taihang and Funiu Mountains. In contrast, two alternative hypotheses are suggested for F. quadranus: if the two species are confirmed as sister groups, F. quadranus might have dispersed from the westernmost Qinling to the Longmen, Qinling, Daba, and northern Wuling Mountains; alternatively, F. quadranus might have come from the northern Wuling Mountains and then dispersed to the Daba, Qinling, and Longmen mountains.</description><identifier>ISSN: 0289-0003</identifier><identifier>DOI: 10.2108/zsj.26.500</identifier><identifier>PMID: 19663646</identifier><language>eng</language><publisher>Japan: UniBio Press</publisher><subject>Amphibia ; Animals ; Anura ; China ; Demography ; Dicroglossinae ; divergence ; DNA, Mitochondrial - genetics ; Ecosystem ; Evolution, Molecular ; Feirana ; Freshwater ; genetic identification ; hypothesis ; molecular phylogeny ; NADH Dehydrogenase - genetics ; ORIGINAL ARTICLES ; Phylogeny ; Ranidae ; Ranidae - classification ; Ranidae - genetics ; RNA, Ribosomal - genetics ; RNA, Ribosomal, 16S ; Species Specificity</subject><ispartof>Zoological Science, 2009-07, Vol.26 (7), p.500-509</ispartof><rights>2009 Zoological Society of Japan</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b350t-6731222b4b107cdcce6c49704411ae5b76c591da2e80890cfc438bff3d312dbe3</citedby><cites>FETCH-LOGICAL-b350t-6731222b4b107cdcce6c49704411ae5b76c591da2e80890cfc438bff3d312dbe3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://bioone.org/doi/pdf/10.2108/zsj.26.500$$EPDF$$P50$$Gbioone$$H</linktopdf><link.rule.ids>314,780,784,26978,27924,27925,52363</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19663646$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Bin</creatorcontrib><creatorcontrib>Jiang, Jianping</creatorcontrib><creatorcontrib>Xie, Feng</creatorcontrib><creatorcontrib>Chen, Xiaohong</creatorcontrib><creatorcontrib>Dubois, Alain</creatorcontrib><creatorcontrib>Liang, Gang</creatorcontrib><creatorcontrib>Wagner, Steven</creatorcontrib><title>Molecular Phylogeny and Genetic Identification of Populations of Two Species of Feirana Frogs (Amphibia: Anura, Ranidae, Dicroglossinae, Paini) Endemic to China</title><title>Zoological Science</title><addtitle>Zoolog Sci</addtitle><description>Using mitochondrial 12S rRNA, 16S rRNA, and ND2 sequences, we investigated phylogenetic relationships among populations of two frog species endemic to China, both referred to the genus Feirana. A sister-group relationship between the two species was supported moderately in a maximum likelihood analysis and significantly in a Bayesian analysis, but not in a maximum parsimony analysis, of combined data for the three genes. Pending resolution of this incongruence, we provisionally maintain these species in the genus Feirana. Two major clades with a deep divergence are concordant with the species F. quadranus and “F.” taihangnica. In the present work, some populations from the Qinling Mountains and all those from the Funiu and the Zhongtiao-southern Taihang Mountains are referred to “F.” taihangnica rather than F. quadranus, whereas others are referred to F. quadranus. Consequently, the main body of the Qinling Mountains was identified as a large contact zone between these two species. On the basis of phylogenetic relationships and the distribution pattern of populations, we propose a hypothesis for the divergence of “F.” taihangnica: the ancestral species might have inhabited the westernmost Qinling Mountains and dispersed to the main Qinling Mountains, and then to the Zhongtiao-southern Taihang and Funiu Mountains. In contrast, two alternative hypotheses are suggested for F. quadranus: if the two species are confirmed as sister groups, F. quadranus might have dispersed from the westernmost Qinling to the Longmen, Qinling, Daba, and northern Wuling Mountains; alternatively, F. quadranus might have come from the northern Wuling Mountains and then dispersed to the Daba, Qinling, and Longmen mountains.</description><subject>Amphibia</subject><subject>Animals</subject><subject>Anura</subject><subject>China</subject><subject>Demography</subject><subject>Dicroglossinae</subject><subject>divergence</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Ecosystem</subject><subject>Evolution, Molecular</subject><subject>Feirana</subject><subject>Freshwater</subject><subject>genetic identification</subject><subject>hypothesis</subject><subject>molecular phylogeny</subject><subject>NADH Dehydrogenase - genetics</subject><subject>ORIGINAL ARTICLES</subject><subject>Phylogeny</subject><subject>Ranidae</subject><subject>Ranidae - classification</subject><subject>Ranidae - genetics</subject><subject>RNA, Ribosomal - genetics</subject><subject>RNA, Ribosomal, 16S</subject><subject>Species Specificity</subject><issn>0289-0003</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFksFu1DAQhnMA0VK48ADIJ1RQd7GdxEm4rZZuqVRgBeVs2c6k65VjB9vRankaHhWHjeAGJ-v3fDO_rX-y7AXBS0pw_fZH2C8pW5YYP8rOMa2bBcY4P8uehrDHmNSkJE-yM9IwlrOCnWc_PzoDajTCo-3uaNwD2CMStkU3YCFqhW5bsFF3WomonUWuQ1s3JH5SYZL3B4e-DqA0_JYb0F5YgTbePQR0ueqHnZZavEMrO3pxhb4Iq1sBV-i9VgkxLgRtJ70V2urX6Nq20Cff6NB6lyrPssedMAGez-dF9m1zfb_-sLj7fHO7Xt0tZF7iuGBVTiilspAEV6pVCpgqmgoXBSECSlkxVTakFRRqXDdYdarIa9l1eZv6Wgn5RfbqNHfw7vsIIfJeBwXGCAtuDJxVZVUVTf5fMMXAGpbTBL45gemfIXjo-OB1L_yREzxRNU9hccp4CivBL-epo-yh_YvOSSXg0wxo8H_KuxgHfjgc-HTrrNEW-H7gytmYYuPCpwgN8GkR-LQIyQ5XeHa8PA2U2rnU9o_H_QJMX7xj</recordid><startdate>20090701</startdate><enddate>20090701</enddate><creator>Wang, Bin</creator><creator>Jiang, Jianping</creator><creator>Xie, Feng</creator><creator>Chen, Xiaohong</creator><creator>Dubois, Alain</creator><creator>Liang, Gang</creator><creator>Wagner, Steven</creator><general>UniBio Press</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20090701</creationdate><title>Molecular Phylogeny and Genetic Identification of Populations of Two Species of Feirana Frogs (Amphibia: Anura, Ranidae, Dicroglossinae, Paini) Endemic to China</title><author>Wang, Bin ; Jiang, Jianping ; Xie, Feng ; Chen, Xiaohong ; Dubois, Alain ; Liang, Gang ; Wagner, Steven</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b350t-6731222b4b107cdcce6c49704411ae5b76c591da2e80890cfc438bff3d312dbe3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Amphibia</topic><topic>Animals</topic><topic>Anura</topic><topic>China</topic><topic>Demography</topic><topic>Dicroglossinae</topic><topic>divergence</topic><topic>DNA, Mitochondrial - genetics</topic><topic>Ecosystem</topic><topic>Evolution, Molecular</topic><topic>Feirana</topic><topic>Freshwater</topic><topic>genetic identification</topic><topic>hypothesis</topic><topic>molecular phylogeny</topic><topic>NADH Dehydrogenase - genetics</topic><topic>ORIGINAL ARTICLES</topic><topic>Phylogeny</topic><topic>Ranidae</topic><topic>Ranidae - classification</topic><topic>Ranidae - genetics</topic><topic>RNA, Ribosomal - genetics</topic><topic>RNA, Ribosomal, 16S</topic><topic>Species Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wang, Bin</creatorcontrib><creatorcontrib>Jiang, Jianping</creatorcontrib><creatorcontrib>Xie, Feng</creatorcontrib><creatorcontrib>Chen, Xiaohong</creatorcontrib><creatorcontrib>Dubois, Alain</creatorcontrib><creatorcontrib>Liang, Gang</creatorcontrib><creatorcontrib>Wagner, Steven</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Zoological Science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Bin</au><au>Jiang, Jianping</au><au>Xie, Feng</au><au>Chen, Xiaohong</au><au>Dubois, Alain</au><au>Liang, Gang</au><au>Wagner, Steven</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular Phylogeny and Genetic Identification of Populations of Two Species of Feirana Frogs (Amphibia: Anura, Ranidae, Dicroglossinae, Paini) Endemic to China</atitle><jtitle>Zoological Science</jtitle><addtitle>Zoolog Sci</addtitle><date>2009-07-01</date><risdate>2009</risdate><volume>26</volume><issue>7</issue><spage>500</spage><epage>509</epage><pages>500-509</pages><issn>0289-0003</issn><abstract>Using mitochondrial 12S rRNA, 16S rRNA, and ND2 sequences, we investigated phylogenetic relationships among populations of two frog species endemic to China, both referred to the genus Feirana. A sister-group relationship between the two species was supported moderately in a maximum likelihood analysis and significantly in a Bayesian analysis, but not in a maximum parsimony analysis, of combined data for the three genes. Pending resolution of this incongruence, we provisionally maintain these species in the genus Feirana. Two major clades with a deep divergence are concordant with the species F. quadranus and “F.” taihangnica. In the present work, some populations from the Qinling Mountains and all those from the Funiu and the Zhongtiao-southern Taihang Mountains are referred to “F.” taihangnica rather than F. quadranus, whereas others are referred to F. quadranus. Consequently, the main body of the Qinling Mountains was identified as a large contact zone between these two species. On the basis of phylogenetic relationships and the distribution pattern of populations, we propose a hypothesis for the divergence of “F.” taihangnica: the ancestral species might have inhabited the westernmost Qinling Mountains and dispersed to the main Qinling Mountains, and then to the Zhongtiao-southern Taihang and Funiu Mountains. In contrast, two alternative hypotheses are suggested for F. quadranus: if the two species are confirmed as sister groups, F. quadranus might have dispersed from the westernmost Qinling to the Longmen, Qinling, Daba, and northern Wuling Mountains; alternatively, F. quadranus might have come from the northern Wuling Mountains and then dispersed to the Daba, Qinling, and Longmen mountains.</abstract><cop>Japan</cop><pub>UniBio Press</pub><pmid>19663646</pmid><doi>10.2108/zsj.26.500</doi><tpages>10</tpages></addata></record> |
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subjects | Amphibia Animals Anura China Demography Dicroglossinae divergence DNA, Mitochondrial - genetics Ecosystem Evolution, Molecular Feirana Freshwater genetic identification hypothesis molecular phylogeny NADH Dehydrogenase - genetics ORIGINAL ARTICLES Phylogeny Ranidae Ranidae - classification Ranidae - genetics RNA, Ribosomal - genetics RNA, Ribosomal, 16S Species Specificity |
title | Molecular Phylogeny and Genetic Identification of Populations of Two Species of Feirana Frogs (Amphibia: Anura, Ranidae, Dicroglossinae, Paini) Endemic to China |
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