Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression

Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors)...

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Veröffentlicht in:Journal of experimental botany 2005-04, Vol.56 (414), p.1079-1091
Hauptverfasser: Gebbie, Leigh K, Burn, Joanne E, Hocart, Charles H, Williamson, Richard E
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creator Gebbie, Leigh K
Burn, Joanne E
Hocart, Charles H
Williamson, Richard E
description Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors) and its relatives such as ARLs (ARF-like proteins). ARFs are essential for vesicle coating and uncoating in all eukaryotic cells, while ARLs play more diverse roles. Nine proteins, six of them highly similar, are possible ARFs, three are putative ARL orthologues and the remainder were designated ARF-related proteins. The functions of the six highly similar, putative ARFs in whole plant development were probed by suppressing their expression with antisense. Antisense plants were severely stunted because cell production rate and final cell size were both reduced. Changed time-to-flowering, apical dominance, and fertility may reflect alterations to hormonal and other signalling pathways with which ARFs may interact. No gross changes in targeting or compartmentalization were seen in antisense plants containing GFP targeted to the ER and Golgi and changes in cell wall composition were limited to increases in some non-cellulosic polysaccharides and a relatively small decrease in cellulose. The reasons why these effects are less drastic than the effects on endomembranes and wall composition that are seen in short-term experiments with brefeldin A and with dominant negative ARF mutants are discussed.
doi_str_mv 10.1093/jxb/eri099
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Heyn.; genome analysis and antisense suppression</title><title>Journal of experimental botany</title><addtitle>J. Exp. Bot</addtitle><description>Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors) and its relatives such as ARLs (ARF-like proteins). ARFs are essential for vesicle coating and uncoating in all eukaryotic cells, while ARLs play more diverse roles. Nine proteins, six of them highly similar, are possible ARFs, three are putative ARL orthologues and the remainder were designated ARF-related proteins. The functions of the six highly similar, putative ARFs in whole plant development were probed by suppressing their expression with antisense. Antisense plants were severely stunted because cell production rate and final cell size were both reduced. Changed time-to-flowering, apical dominance, and fertility may reflect alterations to hormonal and other signalling pathways with which ARFs may interact. No gross changes in targeting or compartmentalization were seen in antisense plants containing GFP targeted to the ER and Golgi and changes in cell wall composition were limited to increases in some non-cellulosic polysaccharides and a relatively small decrease in cellulose. The reasons why these effects are less drastic than the effects on endomembranes and wall composition that are seen in short-term experiments with brefeldin A and with dominant negative ARF mutants are discussed.</description><subject>adenosine diphosphate</subject><subject>ADP-ribosylation factor</subject><subject>ADP-ribosylation factors</subject><subject>ADP-Ribosylation Factors - genetics</subject><subject>Amino Acid Sequence</subject><subject>amino acid sequences</subject><subject>antisense</subject><subject>antisense DNA</subject><subject>apical dominance</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Arabidopsis thaliana</subject><subject>Base Sequence</subject><subject>biochemical pathways</subject><subject>Biochemistry</subject><subject>Biological and medical sciences</subject><subject>cell division</subject><subject>cell expansion</subject><subject>cell growth</subject><subject>Cell membranes</subject><subject>Cell walls</subject><subject>DNA Primers</subject><subject>DNA, Antisense - genetics</subject><subject>Epidermal cells</subject><subject>Fertility</subject><subject>flowering</subject><subject>Flowers - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>gene silencing</subject><subject>genes</subject><subject>Genes. Genome</subject><subject>genome</subject><subject>Genome, Plant</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>phenology</subject><subject>Phenotypes</subject><subject>Phylogeny</subject><subject>Plant cells</subject><subject>plant development</subject><subject>Plant Leaves - genetics</subject><subject>Plant Leaves - ultrastructure</subject><subject>Plants</subject><subject>Polymerase Chain Reaction</subject><subject>Polysaccharides</subject><subject>Proteins</subject><subject>RESEARCH PAPER</subject><subject>Sequence Alignment</subject><subject>Sequence Homology, Amino Acid</subject><subject>Suppression, Genetic</subject><subject>vesicle trafficking</subject><subject>Yeasts</subject><issn>0022-0957</issn><issn>1460-2431</issn><issn>1460-2431</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0UGL1DAUB_AiijuuXryrRdCD0NmXpEkaPI077o4yoKAL4iWkbTpm7CQ1rwM7394MHXbBi4cQyPvx8pJ_lj0nMCeg2MX2tr6w0YFSD7IZKQUUtGTkYTYDoLQAxeVZ9gRxCwAcOH-cnREuKatoNcvw2nqLufVNaJ3f5Ivl1yK6OuChN6MLPu9MM4aIufP5IpratWFAh_n4y_TOeJOv5_nKHvz8fb6xPuxsng77w5EY36Y1OrQebY77YYgWMfV8mj3qTI_22Wk_z26uPn6_XBXrL9efLhfrouFcjYVhxBBL2k62SvCGUqWamkprO6FaazpeVaZkrWhJRVpWGQldLVSaV3QtWEPYefZ26jvE8GdvcdQ7h43te-Nt2KMWkjNagfwvJLIiQlaQ4Ot_4DbsY3owaso4EKpKltC7CTUxIEbb6SG6nYkHTUAfA9MpMD0FlvDLU8d9vbPtPT0llMCbEzDYmL6LxjcO750Qqiz5cbQXk9tiyuuuTktgoECkejHVHY729q5u4u_0D0xyvfrxU8sPS7a6Wn7WZfKvJt-ZoM0mpjtvvlEgDNLYAhhjfwEL-sG5</recordid><startdate>20050401</startdate><enddate>20050401</enddate><creator>Gebbie, Leigh K</creator><creator>Burn, Joanne E</creator><creator>Hocart, Charles H</creator><creator>Williamson, Richard E</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>FBQ</scope><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7QP</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20050401</creationdate><title>Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression</title><author>Gebbie, Leigh K ; Burn, Joanne E ; Hocart, Charles H ; Williamson, Richard E</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c559t-a31a1e1df7d965c2299cb27eef69deaf588a43d6d181d38a70fb69fac6fd0ea13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>adenosine diphosphate</topic><topic>ADP-ribosylation factor</topic><topic>ADP-ribosylation factors</topic><topic>ADP-Ribosylation Factors - genetics</topic><topic>Amino Acid Sequence</topic><topic>amino acid sequences</topic><topic>antisense</topic><topic>antisense DNA</topic><topic>apical dominance</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis thaliana</topic><topic>Base Sequence</topic><topic>biochemical pathways</topic><topic>Biochemistry</topic><topic>Biological and medical sciences</topic><topic>cell division</topic><topic>cell expansion</topic><topic>cell growth</topic><topic>Cell membranes</topic><topic>Cell walls</topic><topic>DNA Primers</topic><topic>DNA, Antisense - genetics</topic><topic>Epidermal cells</topic><topic>Fertility</topic><topic>flowering</topic><topic>Flowers - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>gene silencing</topic><topic>genes</topic><topic>Genes. 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Heyn.; genome analysis and antisense suppression</atitle><jtitle>Journal of experimental botany</jtitle><addtitle>J. Exp. Bot</addtitle><date>2005-04-01</date><risdate>2005</risdate><volume>56</volume><issue>414</issue><spage>1079</spage><epage>1091</epage><pages>1079-1091</pages><issn>0022-0957</issn><issn>1460-2431</issn><eissn>1460-2431</eissn><coden>JEBOA6</coden><abstract>Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors) and its relatives such as ARLs (ARF-like proteins). ARFs are essential for vesicle coating and uncoating in all eukaryotic cells, while ARLs play more diverse roles. Nine proteins, six of them highly similar, are possible ARFs, three are putative ARL orthologues and the remainder were designated ARF-related proteins. The functions of the six highly similar, putative ARFs in whole plant development were probed by suppressing their expression with antisense. Antisense plants were severely stunted because cell production rate and final cell size were both reduced. Changed time-to-flowering, apical dominance, and fertility may reflect alterations to hormonal and other signalling pathways with which ARFs may interact. No gross changes in targeting or compartmentalization were seen in antisense plants containing GFP targeted to the ER and Golgi and changes in cell wall composition were limited to increases in some non-cellulosic polysaccharides and a relatively small decrease in cellulose. The reasons why these effects are less drastic than the effects on endomembranes and wall composition that are seen in short-term experiments with brefeldin A and with dominant negative ARF mutants are discussed.</abstract><cop>Oxford</cop><pub>Oxford University Press</pub><pmid>15723828</pmid><doi>10.1093/jxb/eri099</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record>
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source MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; JSTOR Archive Collection A-Z Listing; Oxford University Press Journals All Titles (1996-Current); Alma/SFX Local Collection
subjects adenosine diphosphate
ADP-ribosylation factor
ADP-ribosylation factors
ADP-Ribosylation Factors - genetics
Amino Acid Sequence
amino acid sequences
antisense
antisense DNA
apical dominance
Arabidopsis - genetics
Arabidopsis Proteins - genetics
Arabidopsis thaliana
Base Sequence
biochemical pathways
Biochemistry
Biological and medical sciences
cell division
cell expansion
cell growth
Cell membranes
Cell walls
DNA Primers
DNA, Antisense - genetics
Epidermal cells
Fertility
flowering
Flowers - genetics
Fundamental and applied biological sciences. Psychology
gene silencing
genes
Genes. Genome
genome
Genome, Plant
Molecular and cellular biology
Molecular genetics
Molecular Sequence Data
nucleotide sequences
phenology
Phenotypes
Phylogeny
Plant cells
plant development
Plant Leaves - genetics
Plant Leaves - ultrastructure
Plants
Polymerase Chain Reaction
Polysaccharides
Proteins
RESEARCH PAPER
Sequence Alignment
Sequence Homology, Amino Acid
Suppression, Genetic
vesicle trafficking
Yeasts
title Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression
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