Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression
Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors)...
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Veröffentlicht in: | Journal of experimental botany 2005-04, Vol.56 (414), p.1079-1091 |
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description | Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors) and its relatives such as ARLs (ARF-like proteins). ARFs are essential for vesicle coating and uncoating in all eukaryotic cells, while ARLs play more diverse roles. Nine proteins, six of them highly similar, are possible ARFs, three are putative ARL orthologues and the remainder were designated ARF-related proteins. The functions of the six highly similar, putative ARFs in whole plant development were probed by suppressing their expression with antisense. Antisense plants were severely stunted because cell production rate and final cell size were both reduced. Changed time-to-flowering, apical dominance, and fertility may reflect alterations to hormonal and other signalling pathways with which ARFs may interact. No gross changes in targeting or compartmentalization were seen in antisense plants containing GFP targeted to the ER and Golgi and changes in cell wall composition were limited to increases in some non-cellulosic polysaccharides and a relatively small decrease in cellulose. The reasons why these effects are less drastic than the effects on endomembranes and wall composition that are seen in short-term experiments with brefeldin A and with dominant negative ARF mutants are discussed. |
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Heyn.; genome analysis and antisense suppression</title><source>MEDLINE</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>JSTOR Archive Collection A-Z Listing</source><source>Oxford University Press Journals All Titles (1996-Current)</source><source>Alma/SFX Local Collection</source><creator>Gebbie, Leigh K ; Burn, Joanne E ; Hocart, Charles H ; Williamson, Richard E</creator><creatorcontrib>Gebbie, Leigh K ; Burn, Joanne E ; Hocart, Charles H ; Williamson, Richard E</creatorcontrib><description>Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors) and its relatives such as ARLs (ARF-like proteins). ARFs are essential for vesicle coating and uncoating in all eukaryotic cells, while ARLs play more diverse roles. Nine proteins, six of them highly similar, are possible ARFs, three are putative ARL orthologues and the remainder were designated ARF-related proteins. The functions of the six highly similar, putative ARFs in whole plant development were probed by suppressing their expression with antisense. Antisense plants were severely stunted because cell production rate and final cell size were both reduced. Changed time-to-flowering, apical dominance, and fertility may reflect alterations to hormonal and other signalling pathways with which ARFs may interact. No gross changes in targeting or compartmentalization were seen in antisense plants containing GFP targeted to the ER and Golgi and changes in cell wall composition were limited to increases in some non-cellulosic polysaccharides and a relatively small decrease in cellulose. The reasons why these effects are less drastic than the effects on endomembranes and wall composition that are seen in short-term experiments with brefeldin A and with dominant negative ARF mutants are discussed.</description><identifier>ISSN: 0022-0957</identifier><identifier>ISSN: 1460-2431</identifier><identifier>EISSN: 1460-2431</identifier><identifier>DOI: 10.1093/jxb/eri099</identifier><identifier>PMID: 15723828</identifier><identifier>CODEN: JEBOA6</identifier><language>eng</language><publisher>Oxford: Oxford University Press</publisher><subject>adenosine diphosphate ; ADP-ribosylation factor ; ADP-ribosylation factors ; ADP-Ribosylation Factors - genetics ; Amino Acid Sequence ; amino acid sequences ; antisense ; antisense DNA ; apical dominance ; Arabidopsis - genetics ; Arabidopsis Proteins - genetics ; Arabidopsis thaliana ; Base Sequence ; biochemical pathways ; Biochemistry ; Biological and medical sciences ; cell division ; cell expansion ; cell growth ; Cell membranes ; Cell walls ; DNA Primers ; DNA, Antisense - genetics ; Epidermal cells ; Fertility ; flowering ; Flowers - genetics ; Fundamental and applied biological sciences. Psychology ; gene silencing ; genes ; Genes. Genome ; genome ; Genome, Plant ; Molecular and cellular biology ; Molecular genetics ; Molecular Sequence Data ; nucleotide sequences ; phenology ; Phenotypes ; Phylogeny ; Plant cells ; plant development ; Plant Leaves - genetics ; Plant Leaves - ultrastructure ; Plants ; Polymerase Chain Reaction ; Polysaccharides ; Proteins ; RESEARCH PAPER ; Sequence Alignment ; Sequence Homology, Amino Acid ; Suppression, Genetic ; vesicle trafficking ; Yeasts</subject><ispartof>Journal of experimental botany, 2005-04, Vol.56 (414), p.1079-1091</ispartof><rights>Society for Experimental Biology 2005</rights><rights>2005 INIST-CNRS</rights><rights>Copyright Oxford University Press(England) Apr 2005</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c559t-a31a1e1df7d965c2299cb27eef69deaf588a43d6d181d38a70fb69fac6fd0ea13</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/24030906$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/24030906$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,803,27924,27925,58017,58250</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=16694450$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15723828$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Gebbie, Leigh K</creatorcontrib><creatorcontrib>Burn, Joanne E</creatorcontrib><creatorcontrib>Hocart, Charles H</creatorcontrib><creatorcontrib>Williamson, Richard E</creatorcontrib><title>Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression</title><title>Journal of experimental botany</title><addtitle>J. Exp. Bot</addtitle><description>Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors) and its relatives such as ARLs (ARF-like proteins). ARFs are essential for vesicle coating and uncoating in all eukaryotic cells, while ARLs play more diverse roles. Nine proteins, six of them highly similar, are possible ARFs, three are putative ARL orthologues and the remainder were designated ARF-related proteins. The functions of the six highly similar, putative ARFs in whole plant development were probed by suppressing their expression with antisense. Antisense plants were severely stunted because cell production rate and final cell size were both reduced. Changed time-to-flowering, apical dominance, and fertility may reflect alterations to hormonal and other signalling pathways with which ARFs may interact. No gross changes in targeting or compartmentalization were seen in antisense plants containing GFP targeted to the ER and Golgi and changes in cell wall composition were limited to increases in some non-cellulosic polysaccharides and a relatively small decrease in cellulose. The reasons why these effects are less drastic than the effects on endomembranes and wall composition that are seen in short-term experiments with brefeldin A and with dominant negative ARF mutants are discussed.</description><subject>adenosine diphosphate</subject><subject>ADP-ribosylation factor</subject><subject>ADP-ribosylation factors</subject><subject>ADP-Ribosylation Factors - genetics</subject><subject>Amino Acid Sequence</subject><subject>amino acid sequences</subject><subject>antisense</subject><subject>antisense DNA</subject><subject>apical dominance</subject><subject>Arabidopsis - genetics</subject><subject>Arabidopsis Proteins - genetics</subject><subject>Arabidopsis thaliana</subject><subject>Base Sequence</subject><subject>biochemical pathways</subject><subject>Biochemistry</subject><subject>Biological and medical sciences</subject><subject>cell division</subject><subject>cell expansion</subject><subject>cell growth</subject><subject>Cell membranes</subject><subject>Cell walls</subject><subject>DNA Primers</subject><subject>DNA, Antisense - genetics</subject><subject>Epidermal cells</subject><subject>Fertility</subject><subject>flowering</subject><subject>Flowers - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>gene silencing</subject><subject>genes</subject><subject>Genes. Genome</subject><subject>genome</subject><subject>Genome, Plant</subject><subject>Molecular and cellular biology</subject><subject>Molecular genetics</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>phenology</subject><subject>Phenotypes</subject><subject>Phylogeny</subject><subject>Plant cells</subject><subject>plant development</subject><subject>Plant Leaves - genetics</subject><subject>Plant Leaves - ultrastructure</subject><subject>Plants</subject><subject>Polymerase Chain Reaction</subject><subject>Polysaccharides</subject><subject>Proteins</subject><subject>RESEARCH PAPER</subject><subject>Sequence Alignment</subject><subject>Sequence Homology, Amino Acid</subject><subject>Suppression, Genetic</subject><subject>vesicle trafficking</subject><subject>Yeasts</subject><issn>0022-0957</issn><issn>1460-2431</issn><issn>1460-2431</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0UGL1DAUB_AiijuuXryrRdCD0NmXpEkaPI077o4yoKAL4iWkbTpm7CQ1rwM7394MHXbBi4cQyPvx8pJ_lj0nMCeg2MX2tr6w0YFSD7IZKQUUtGTkYTYDoLQAxeVZ9gRxCwAcOH-cnREuKatoNcvw2nqLufVNaJ3f5Ivl1yK6OuChN6MLPu9MM4aIufP5IpratWFAh_n4y_TOeJOv5_nKHvz8fb6xPuxsng77w5EY36Y1OrQebY77YYgWMfV8mj3qTI_22Wk_z26uPn6_XBXrL9efLhfrouFcjYVhxBBL2k62SvCGUqWamkprO6FaazpeVaZkrWhJRVpWGQldLVSaV3QtWEPYefZ26jvE8GdvcdQ7h43te-Nt2KMWkjNagfwvJLIiQlaQ4Ot_4DbsY3owaso4EKpKltC7CTUxIEbb6SG6nYkHTUAfA9MpMD0FlvDLU8d9vbPtPT0llMCbEzDYmL6LxjcO750Qqiz5cbQXk9tiyuuuTktgoECkejHVHY729q5u4u_0D0xyvfrxU8sPS7a6Wn7WZfKvJt-ZoM0mpjtvvlEgDNLYAhhjfwEL-sG5</recordid><startdate>20050401</startdate><enddate>20050401</enddate><creator>Gebbie, Leigh K</creator><creator>Burn, Joanne E</creator><creator>Hocart, Charles H</creator><creator>Williamson, Richard E</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>FBQ</scope><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7QP</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20050401</creationdate><title>Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression</title><author>Gebbie, Leigh K ; Burn, Joanne E ; Hocart, Charles H ; Williamson, Richard E</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c559t-a31a1e1df7d965c2299cb27eef69deaf588a43d6d181d38a70fb69fac6fd0ea13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>adenosine diphosphate</topic><topic>ADP-ribosylation factor</topic><topic>ADP-ribosylation factors</topic><topic>ADP-Ribosylation Factors - genetics</topic><topic>Amino Acid Sequence</topic><topic>amino acid sequences</topic><topic>antisense</topic><topic>antisense DNA</topic><topic>apical dominance</topic><topic>Arabidopsis - genetics</topic><topic>Arabidopsis Proteins - genetics</topic><topic>Arabidopsis thaliana</topic><topic>Base Sequence</topic><topic>biochemical pathways</topic><topic>Biochemistry</topic><topic>Biological and medical sciences</topic><topic>cell division</topic><topic>cell expansion</topic><topic>cell growth</topic><topic>Cell membranes</topic><topic>Cell walls</topic><topic>DNA Primers</topic><topic>DNA, Antisense - genetics</topic><topic>Epidermal cells</topic><topic>Fertility</topic><topic>flowering</topic><topic>Flowers - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>gene silencing</topic><topic>genes</topic><topic>Genes. Genome</topic><topic>genome</topic><topic>Genome, Plant</topic><topic>Molecular and cellular biology</topic><topic>Molecular genetics</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequences</topic><topic>phenology</topic><topic>Phenotypes</topic><topic>Phylogeny</topic><topic>Plant cells</topic><topic>plant development</topic><topic>Plant Leaves - genetics</topic><topic>Plant Leaves - ultrastructure</topic><topic>Plants</topic><topic>Polymerase Chain Reaction</topic><topic>Polysaccharides</topic><topic>Proteins</topic><topic>RESEARCH PAPER</topic><topic>Sequence Alignment</topic><topic>Sequence Homology, Amino Acid</topic><topic>Suppression, Genetic</topic><topic>vesicle trafficking</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gebbie, Leigh K</creatorcontrib><creatorcontrib>Burn, Joanne E</creatorcontrib><creatorcontrib>Hocart, Charles H</creatorcontrib><creatorcontrib>Williamson, Richard E</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of experimental botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Gebbie, Leigh K</au><au>Burn, Joanne E</au><au>Hocart, Charles H</au><au>Williamson, Richard E</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression</atitle><jtitle>Journal of experimental botany</jtitle><addtitle>J. Exp. Bot</addtitle><date>2005-04-01</date><risdate>2005</risdate><volume>56</volume><issue>414</issue><spage>1079</spage><epage>1091</epage><pages>1079-1091</pages><issn>0022-0957</issn><issn>1460-2431</issn><eissn>1460-2431</eissn><coden>JEBOA6</coden><abstract>Vesicle trafficking delivers proteins to intracellular and extracellular compartments, cellulose synthase to the plasma membrane, and non-cellulosic polysaccharides to the cell wall. The Arabidopsis genome potentially encodes 19 proteins with sequence similarities to ARFs (ADP-ribosylation factors) and its relatives such as ARLs (ARF-like proteins). ARFs are essential for vesicle coating and uncoating in all eukaryotic cells, while ARLs play more diverse roles. Nine proteins, six of them highly similar, are possible ARFs, three are putative ARL orthologues and the remainder were designated ARF-related proteins. The functions of the six highly similar, putative ARFs in whole plant development were probed by suppressing their expression with antisense. Antisense plants were severely stunted because cell production rate and final cell size were both reduced. Changed time-to-flowering, apical dominance, and fertility may reflect alterations to hormonal and other signalling pathways with which ARFs may interact. No gross changes in targeting or compartmentalization were seen in antisense plants containing GFP targeted to the ER and Golgi and changes in cell wall composition were limited to increases in some non-cellulosic polysaccharides and a relatively small decrease in cellulose. The reasons why these effects are less drastic than the effects on endomembranes and wall composition that are seen in short-term experiments with brefeldin A and with dominant negative ARF mutants are discussed.</abstract><cop>Oxford</cop><pub>Oxford University Press</pub><pmid>15723828</pmid><doi>10.1093/jxb/eri099</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
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subjects | adenosine diphosphate ADP-ribosylation factor ADP-ribosylation factors ADP-Ribosylation Factors - genetics Amino Acid Sequence amino acid sequences antisense antisense DNA apical dominance Arabidopsis - genetics Arabidopsis Proteins - genetics Arabidopsis thaliana Base Sequence biochemical pathways Biochemistry Biological and medical sciences cell division cell expansion cell growth Cell membranes Cell walls DNA Primers DNA, Antisense - genetics Epidermal cells Fertility flowering Flowers - genetics Fundamental and applied biological sciences. Psychology gene silencing genes Genes. Genome genome Genome, Plant Molecular and cellular biology Molecular genetics Molecular Sequence Data nucleotide sequences phenology Phenotypes Phylogeny Plant cells plant development Plant Leaves - genetics Plant Leaves - ultrastructure Plants Polymerase Chain Reaction Polysaccharides Proteins RESEARCH PAPER Sequence Alignment Sequence Homology, Amino Acid Suppression, Genetic vesicle trafficking Yeasts |
title | Genes encoding ADP-ribosylation factors in Arabidopsis thaliana L. Heyn.; genome analysis and antisense suppression |
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