Identification and characterization of a novel Tritimovirus species isolated from wild Trisetum flavescens L., family Poaceae
Yellow oat-grass plants (Trisetum flavescens L.) with mild mosaic and pronounced dwarfing symptoms were observed at different locations in the Czech Republic. Electron microscope observations of symptomatic plants revealed the presence of filamentous particles and inclusion bodies characteristic of...
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| Veröffentlicht in: | Virus genes 2009-08, Vol.39 (1), p.146-152 |
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| creator | Hassan, Mohamed Širlova, Lenka Jokeš, Milan Vacke, Josef |
| description | Yellow oat-grass plants (Trisetum flavescens L.) with mild mosaic and pronounced dwarfing symptoms were observed at different locations in the Czech Republic. Electron microscope observations of symptomatic plants revealed the presence of filamentous particles and inclusion bodies characteristic of the family Potyviridae. The virus was readily mechanically transmitted to its original host plus a narrow host range of monocot species. Serological assays of infected plant extracts using antiserum specific to the closest species in the family Potyviridae were negative. The 3' end of the viral genome was cloned, sequenced and compared to sequences of species in the family Potyviridae. The virus is more closely related to viruses in the genus Tritimovirus than to other genera within the Potyviridae. Based on phylogenetic analyses of the coat protein cistron and flanking genomic regions, we propose this is a distinct viral species of the genus Tritimovirus, tentatively named Yellow oat-grass mosaic virus (YOgMV). |
| doi_str_mv | 10.1007/s11262-009-0373-y |
| format | Article |
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Electron microscope observations of symptomatic plants revealed the presence of filamentous particles and inclusion bodies characteristic of the family Potyviridae. The virus was readily mechanically transmitted to its original host plus a narrow host range of monocot species. Serological assays of infected plant extracts using antiserum specific to the closest species in the family Potyviridae were negative. The 3' end of the viral genome was cloned, sequenced and compared to sequences of species in the family Potyviridae. The virus is more closely related to viruses in the genus Tritimovirus than to other genera within the Potyviridae. Based on phylogenetic analyses of the coat protein cistron and flanking genomic regions, we propose this is a distinct viral species of the genus Tritimovirus, tentatively named Yellow oat-grass mosaic virus (YOgMV).</description><identifier>ISSN: 0920-8569</identifier><identifier>EISSN: 1572-994X</identifier><identifier>DOI: 10.1007/s11262-009-0373-y</identifier><identifier>PMID: 19533320</identifier><language>eng</language><publisher>New York: Boston : Springer US</publisher><subject>Amino Acid Sequence ; Biomedical and Life Sciences ; Biomedicine ; Capsid Proteins - genetics ; Cluster Analysis ; Czech Republic ; Inclusion Bodies - virology ; Medical Microbiology ; Molecular Sequence Data ; Phylogeny ; Plant Diseases - virology ; Plant Sciences ; Poaceae ; Poaceae - virology ; Potyviridae ; Potyviridae - classification ; Potyviridae - genetics ; Potyviridae - isolation & purification ; RNA, Viral - genetics ; Sequence Alignment ; Sequence Analysis, DNA ; Sequence Homology ; Trisetum flavescens ; Virion - ultrastructure ; Virology</subject><ispartof>Virus genes, 2009-08, Vol.39 (1), p.146-152</ispartof><rights>Springer Science+Business Media, LLC 2009</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c424t-7e2ab634c89c3465067ee1ecdbf9d3e1a8f7d29edf2a259d43fd8f0ea3bd86983</citedby><cites>FETCH-LOGICAL-c424t-7e2ab634c89c3465067ee1ecdbf9d3e1a8f7d29edf2a259d43fd8f0ea3bd86983</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11262-009-0373-y$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11262-009-0373-y$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27922,27923,41486,42555,51317</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19533320$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hassan, Mohamed</creatorcontrib><creatorcontrib>Širlova, Lenka</creatorcontrib><creatorcontrib>Jokeš, Milan</creatorcontrib><creatorcontrib>Vacke, Josef</creatorcontrib><title>Identification and characterization of a novel Tritimovirus species isolated from wild Trisetum flavescens L., family Poaceae</title><title>Virus genes</title><addtitle>Virus Genes</addtitle><addtitle>Virus Genes</addtitle><description>Yellow oat-grass plants (Trisetum flavescens L.) with mild mosaic and pronounced dwarfing symptoms were observed at different locations in the Czech Republic. Electron microscope observations of symptomatic plants revealed the presence of filamentous particles and inclusion bodies characteristic of the family Potyviridae. The virus was readily mechanically transmitted to its original host plus a narrow host range of monocot species. Serological assays of infected plant extracts using antiserum specific to the closest species in the family Potyviridae were negative. The 3' end of the viral genome was cloned, sequenced and compared to sequences of species in the family Potyviridae. The virus is more closely related to viruses in the genus Tritimovirus than to other genera within the Potyviridae. 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Širlova, Lenka ; Jokeš, Milan ; Vacke, Josef</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c424t-7e2ab634c89c3465067ee1ecdbf9d3e1a8f7d29edf2a259d43fd8f0ea3bd86983</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Amino Acid Sequence</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Capsid Proteins - genetics</topic><topic>Cluster Analysis</topic><topic>Czech Republic</topic><topic>Inclusion Bodies - virology</topic><topic>Medical Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>Plant Diseases - virology</topic><topic>Plant Sciences</topic><topic>Poaceae</topic><topic>Poaceae - virology</topic><topic>Potyviridae</topic><topic>Potyviridae - classification</topic><topic>Potyviridae - genetics</topic><topic>Potyviridae - isolation & purification</topic><topic>RNA, Viral - genetics</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, DNA</topic><topic>Sequence Homology</topic><topic>Trisetum flavescens</topic><topic>Virion - ultrastructure</topic><topic>Virology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hassan, Mohamed</creatorcontrib><creatorcontrib>Širlova, Lenka</creatorcontrib><creatorcontrib>Jokeš, Milan</creatorcontrib><creatorcontrib>Vacke, Josef</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Virus genes</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hassan, Mohamed</au><au>Širlova, Lenka</au><au>Jokeš, Milan</au><au>Vacke, Josef</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and characterization of a novel Tritimovirus species isolated from wild Trisetum flavescens L., family Poaceae</atitle><jtitle>Virus genes</jtitle><stitle>Virus Genes</stitle><addtitle>Virus Genes</addtitle><date>2009-08-01</date><risdate>2009</risdate><volume>39</volume><issue>1</issue><spage>146</spage><epage>152</epage><pages>146-152</pages><issn>0920-8569</issn><eissn>1572-994X</eissn><abstract>Yellow oat-grass plants (Trisetum flavescens L.) with mild mosaic and pronounced dwarfing symptoms were observed at different locations in the Czech Republic. Electron microscope observations of symptomatic plants revealed the presence of filamentous particles and inclusion bodies characteristic of the family Potyviridae. The virus was readily mechanically transmitted to its original host plus a narrow host range of monocot species. Serological assays of infected plant extracts using antiserum specific to the closest species in the family Potyviridae were negative. The 3' end of the viral genome was cloned, sequenced and compared to sequences of species in the family Potyviridae. The virus is more closely related to viruses in the genus Tritimovirus than to other genera within the Potyviridae. Based on phylogenetic analyses of the coat protein cistron and flanking genomic regions, we propose this is a distinct viral species of the genus Tritimovirus, tentatively named Yellow oat-grass mosaic virus (YOgMV).</abstract><cop>New York</cop><pub>Boston : Springer US</pub><pmid>19533320</pmid><doi>10.1007/s11262-009-0373-y</doi><tpages>7</tpages></addata></record> |
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| ispartof | Virus genes, 2009-08, Vol.39 (1), p.146-152 |
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| subjects | Amino Acid Sequence Biomedical and Life Sciences Biomedicine Capsid Proteins - genetics Cluster Analysis Czech Republic Inclusion Bodies - virology Medical Microbiology Molecular Sequence Data Phylogeny Plant Diseases - virology Plant Sciences Poaceae Poaceae - virology Potyviridae Potyviridae - classification Potyviridae - genetics Potyviridae - isolation & purification RNA, Viral - genetics Sequence Alignment Sequence Analysis, DNA Sequence Homology Trisetum flavescens Virion - ultrastructure Virology |
| title | Identification and characterization of a novel Tritimovirus species isolated from wild Trisetum flavescens L., family Poaceae |
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