QTL for body weight and condition factor in Atlantic salmon (Salmo salar): comparative analysis with rainbow trout (Oncorhynchus mykiss) and Arctic charr (Salvelinus alpinus)
Genotypes at 91 microsatellite loci in three full-sib families were used to search for QTL affecting body weight (BW) and condition factor in North American Atlantic salmon (Salmo salar). More than one informative marker was identified on 16-18 linkage groups in each family, allowing at least one ch...
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| Veröffentlicht in: | Heredity 2005-02, Vol.94 (2), p.166-172 |
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| creator | Reid, D.P Szanto, A Glebe, B Danzmann, R.G Ferguson, M.M |
| description | Genotypes at 91 microsatellite loci in three full-sib families were used to search for QTL affecting body weight (BW) and condition factor in North American Atlantic salmon (Salmo salar). More than one informative marker was identified on 16-18 linkage groups in each family, allowing at least one chromosomal interval to be analyzed per linkage group. Two significant QTL for BW on linkage groups AS-8 and AS-11, and four significant QTL for condition factor on linkage groups AS-2, AS-5, AS-11, and AS-14 were identified. QTL for both BW and condition factor were located on linkage groups AS-1, 6, 8, 11, and 14 when considering both significant and suggestive QTL effects. The largest QTL effects for BW (AS-8) and for condition factor (AS-14) accounted for 20.1 and 24.9% of the trait variation, respectively. Three of the QTL for BW occur on linkage groups where similar effects have been detected on the homologous regions in either rainbow trout (Oncorhynchus mykiss) or Arctic charr (Salvelinus alpinus). |
| doi_str_mv | 10.1038/sj.hdy.6800590 |
| format | Article |
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More than one informative marker was identified on 16-18 linkage groups in each family, allowing at least one chromosomal interval to be analyzed per linkage group. Two significant QTL for BW on linkage groups AS-8 and AS-11, and four significant QTL for condition factor on linkage groups AS-2, AS-5, AS-11, and AS-14 were identified. QTL for both BW and condition factor were located on linkage groups AS-1, 6, 8, 11, and 14 when considering both significant and suggestive QTL effects. The largest QTL effects for BW (AS-8) and for condition factor (AS-14) accounted for 20.1 and 24.9% of the trait variation, respectively. Three of the QTL for BW occur on linkage groups where similar effects have been detected on the homologous regions in either rainbow trout (Oncorhynchus mykiss) or Arctic charr (Salvelinus alpinus).</description><identifier>ISSN: 0018-067X</identifier><identifier>EISSN: 1365-2540</identifier><identifier>DOI: 10.1038/sj.hdy.6800590</identifier><identifier>PMID: 15483654</identifier><identifier>CODEN: HDTYAT</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Animals ; Biomedical and Life Sciences ; Biomedicine ; body condition ; Body Constitution - genetics ; Body weight ; Body Weight - genetics ; Chromosome Mapping ; condition factor ; Cytogenetics ; Ecology ; Evolutionary Biology ; genetic markers ; Genotype ; Genotypes ; Human Genetics ; linkage groups ; microsatellite repeats ; Microsatellite Repeats - genetics ; Oncorhynchus mykiss ; original-article ; Plant Genetics and Genomics ; Quantitative Trait Loci ; Salmo salar ; Salmon ; Salmonidae - genetics ; Salvelinus alpinus</subject><ispartof>Heredity, 2005-02, Vol.94 (2), p.166-172</ispartof><rights>The Genetics Society 2005</rights><rights>Copyright Nature Publishing Group Feb 2005</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c486t-cad2641389ea883aff92a0716f4fc326e3de1a021d82ee740d54c6a509b1303</citedby><cites>FETCH-LOGICAL-c486t-cad2641389ea883aff92a0716f4fc326e3de1a021d82ee740d54c6a509b1303</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/sj.hdy.6800590$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1038/sj.hdy.6800590$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15483654$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Reid, D.P</creatorcontrib><creatorcontrib>Szanto, A</creatorcontrib><creatorcontrib>Glebe, B</creatorcontrib><creatorcontrib>Danzmann, R.G</creatorcontrib><creatorcontrib>Ferguson, M.M</creatorcontrib><title>QTL for body weight and condition factor in Atlantic salmon (Salmo salar): comparative analysis with rainbow trout (Oncorhynchus mykiss) and Arctic charr (Salvelinus alpinus)</title><title>Heredity</title><addtitle>Heredity</addtitle><addtitle>Heredity (Edinb)</addtitle><description>Genotypes at 91 microsatellite loci in three full-sib families were used to search for QTL affecting body weight (BW) and condition factor in North American Atlantic salmon (Salmo salar). More than one informative marker was identified on 16-18 linkage groups in each family, allowing at least one chromosomal interval to be analyzed per linkage group. Two significant QTL for BW on linkage groups AS-8 and AS-11, and four significant QTL for condition factor on linkage groups AS-2, AS-5, AS-11, and AS-14 were identified. QTL for both BW and condition factor were located on linkage groups AS-1, 6, 8, 11, and 14 when considering both significant and suggestive QTL effects. The largest QTL effects for BW (AS-8) and for condition factor (AS-14) accounted for 20.1 and 24.9% of the trait variation, respectively. 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Academic</collection><jtitle>Heredity</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Reid, D.P</au><au>Szanto, A</au><au>Glebe, B</au><au>Danzmann, R.G</au><au>Ferguson, M.M</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>QTL for body weight and condition factor in Atlantic salmon (Salmo salar): comparative analysis with rainbow trout (Oncorhynchus mykiss) and Arctic charr (Salvelinus alpinus)</atitle><jtitle>Heredity</jtitle><stitle>Heredity</stitle><addtitle>Heredity (Edinb)</addtitle><date>2005-02-01</date><risdate>2005</risdate><volume>94</volume><issue>2</issue><spage>166</spage><epage>172</epage><pages>166-172</pages><issn>0018-067X</issn><eissn>1365-2540</eissn><coden>HDTYAT</coden><abstract>Genotypes at 91 microsatellite loci in three full-sib families were used to search for QTL affecting body weight (BW) and condition factor in North American Atlantic salmon (Salmo salar). More than one informative marker was identified on 16-18 linkage groups in each family, allowing at least one chromosomal interval to be analyzed per linkage group. Two significant QTL for BW on linkage groups AS-8 and AS-11, and four significant QTL for condition factor on linkage groups AS-2, AS-5, AS-11, and AS-14 were identified. QTL for both BW and condition factor were located on linkage groups AS-1, 6, 8, 11, and 14 when considering both significant and suggestive QTL effects. The largest QTL effects for BW (AS-8) and for condition factor (AS-14) accounted for 20.1 and 24.9% of the trait variation, respectively. Three of the QTL for BW occur on linkage groups where similar effects have been detected on the homologous regions in either rainbow trout (Oncorhynchus mykiss) or Arctic charr (Salvelinus alpinus).</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>15483654</pmid><doi>10.1038/sj.hdy.6800590</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | Heredity, 2005-02, Vol.94 (2), p.166-172 |
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| source | MEDLINE; Nature Journals Online; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; SpringerLink Journals - AutoHoldings |
| subjects | Animals Biomedical and Life Sciences Biomedicine body condition Body Constitution - genetics Body weight Body Weight - genetics Chromosome Mapping condition factor Cytogenetics Ecology Evolutionary Biology genetic markers Genotype Genotypes Human Genetics linkage groups microsatellite repeats Microsatellite Repeats - genetics Oncorhynchus mykiss original-article Plant Genetics and Genomics Quantitative Trait Loci Salmo salar Salmon Salmonidae - genetics Salvelinus alpinus |
| title | QTL for body weight and condition factor in Atlantic salmon (Salmo salar): comparative analysis with rainbow trout (Oncorhynchus mykiss) and Arctic charr (Salvelinus alpinus) |
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