Agromyces salentinus sp. nov. and Agromyces neolithicus sp. nov
1 Instituto de Recursos Naturales y Agrobiologia, CSIC, Apartado 1052, 41080 Sevilla, Spain 2 Hans-Knöll-Institut für Naturstoff-Forschung eV, D-07745 Jena, Germany Correspondence Cesareo Saiz-Jimenez saiz{at}irnase.csic.es A polyphasic study was carried out to clarify the taxonomic position of two...
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| creator | Jurado, Valme Groth, Ingrid Gonzalez, Juan M Laiz, Leonila Saiz-Jimenez, Cesareo |
| description | 1 Instituto de Recursos Naturales y Agrobiologia, CSIC, Apartado 1052, 41080 Sevilla, Spain
2 Hans-Knöll-Institut für Naturstoff-Forschung eV, D-07745 Jena, Germany
Correspondence Cesareo Saiz-Jimenez saiz{at}irnase.csic.es
A polyphasic study was carried out to clarify the taxonomic position of two Gram-positive bacteria isolated from soil samples of the Grotta dei Cervi (Italy), a relatively unexplored hypogean environment. The strains, 20-5 T and 23-23 T , showed phenotypic and phylogenetic characteristics that were consistent with their classification in the genus Agromyces . 16S rRNA gene sequence comparisons revealed that the two strains formed distinct phyletic lines within the genus Agromyces . Based on 16S rRNA gene sequence similarity, chemotaxonomic data and the results of DNADNA relatedness studies, it is proposed that the two isolates represent two novel species of the genus Agromyces . Pronounced differences in a broad range of phenotypic characteristics and DNA G+C content distinguished the two strains from each other and from previously described species of the genus Agromyces . Two novel species are proposed: Agromyces salentinus sp. nov. (type strain, 20-5 T =HKI 0320 T =DSM 16198 T =NCIMB 13990 T ) and Agromyces neolithicus sp. nov. (type strain, 23-23 T =HKI 0321 T =DSM 16197 T =NCIMB 13989 T ).
Published online ahead of print on 22 October 2004 as DOI 10.1099/ijs.0.63199-0.
The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA gene sequences of strains 20-5 T and 23-23 T are AY507129 and AY507128 , respectively. |
| doi_str_mv | 10.1099/ijs.0.63199-0 |
| format | Article |
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2 Hans-Knöll-Institut für Naturstoff-Forschung eV, D-07745 Jena, Germany
Correspondence Cesareo Saiz-Jimenez saiz{at}irnase.csic.es
A polyphasic study was carried out to clarify the taxonomic position of two Gram-positive bacteria isolated from soil samples of the Grotta dei Cervi (Italy), a relatively unexplored hypogean environment. The strains, 20-5 T and 23-23 T , showed phenotypic and phylogenetic characteristics that were consistent with their classification in the genus Agromyces . 16S rRNA gene sequence comparisons revealed that the two strains formed distinct phyletic lines within the genus Agromyces . Based on 16S rRNA gene sequence similarity, chemotaxonomic data and the results of DNADNA relatedness studies, it is proposed that the two isolates represent two novel species of the genus Agromyces . Pronounced differences in a broad range of phenotypic characteristics and DNA G+C content distinguished the two strains from each other and from previously described species of the genus Agromyces . Two novel species are proposed: Agromyces salentinus sp. nov. (type strain, 20-5 T =HKI 0320 T =DSM 16198 T =NCIMB 13990 T ) and Agromyces neolithicus sp. nov. (type strain, 23-23 T =HKI 0321 T =DSM 16197 T =NCIMB 13989 T ).
Published online ahead of print on 22 October 2004 as DOI 10.1099/ijs.0.63199-0.
The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA gene sequences of strains 20-5 T and 23-23 T are AY507129 and AY507128 , respectively.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.63199-0</identifier><identifier>PMID: 15653869</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Actinomycetales - chemistry ; Actinomycetales - classification ; Actinomycetales - genetics ; Actinomycetales - isolation & purification ; Agromyces neolithicus ; Agromyces salentinus ; Animal, plant and microbial ecology ; Bacteriology ; Base Composition ; Biological and medical sciences ; DNA, Bacterial - analysis ; DNA, Ribosomal - analysis ; Fundamental and applied biological sciences. Psychology ; Genes, rRNA ; Italy ; Microbial ecology ; Microbiology ; Molecular Sequence Data ; Nucleic Acid Hybridization ; Phenotype ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Soil ; Soil Microbiology ; Systematics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2005-01, Vol.55 (1), p.153-157</ispartof><rights>2006 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c489t-5db783877381c676df2580d9e5cefbded2551905d105ee8ef123c0b9e0482da63</citedby><cites>FETCH-LOGICAL-c489t-5db783877381c676df2580d9e5cefbded2551905d105ee8ef123c0b9e0482da63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3733,3734,4010,27900,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=16427657$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15653869$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jurado, Valme</creatorcontrib><creatorcontrib>Groth, Ingrid</creatorcontrib><creatorcontrib>Gonzalez, Juan M</creatorcontrib><creatorcontrib>Laiz, Leonila</creatorcontrib><creatorcontrib>Saiz-Jimenez, Cesareo</creatorcontrib><title>Agromyces salentinus sp. nov. and Agromyces neolithicus sp. nov</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 Instituto de Recursos Naturales y Agrobiologia, CSIC, Apartado 1052, 41080 Sevilla, Spain
2 Hans-Knöll-Institut für Naturstoff-Forschung eV, D-07745 Jena, Germany
Correspondence Cesareo Saiz-Jimenez saiz{at}irnase.csic.es
A polyphasic study was carried out to clarify the taxonomic position of two Gram-positive bacteria isolated from soil samples of the Grotta dei Cervi (Italy), a relatively unexplored hypogean environment. The strains, 20-5 T and 23-23 T , showed phenotypic and phylogenetic characteristics that were consistent with their classification in the genus Agromyces . 16S rRNA gene sequence comparisons revealed that the two strains formed distinct phyletic lines within the genus Agromyces . Based on 16S rRNA gene sequence similarity, chemotaxonomic data and the results of DNADNA relatedness studies, it is proposed that the two isolates represent two novel species of the genus Agromyces . Pronounced differences in a broad range of phenotypic characteristics and DNA G+C content distinguished the two strains from each other and from previously described species of the genus Agromyces . Two novel species are proposed: Agromyces salentinus sp. nov. (type strain, 20-5 T =HKI 0320 T =DSM 16198 T =NCIMB 13990 T ) and Agromyces neolithicus sp. nov. (type strain, 23-23 T =HKI 0321 T =DSM 16197 T =NCIMB 13989 T ).
Published online ahead of print on 22 October 2004 as DOI 10.1099/ijs.0.63199-0.
The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA gene sequences of strains 20-5 T and 23-23 T are AY507129 and AY507128 , respectively.</description><subject>Actinomycetales - chemistry</subject><subject>Actinomycetales - classification</subject><subject>Actinomycetales - genetics</subject><subject>Actinomycetales - isolation & purification</subject><subject>Agromyces neolithicus</subject><subject>Agromyces salentinus</subject><subject>Animal, plant and microbial ecology</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>DNA, Bacterial - analysis</subject><subject>DNA, Ribosomal - analysis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes, rRNA</subject><subject>Italy</subject><subject>Microbial ecology</subject><subject>Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Nucleic Acid Hybridization</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Soil</subject><subject>Soil Microbiology</subject><subject>Systematics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0MtLAzEQBvAgiu-jV-lFPe062WxeJynFFxS86Dlkk9k2so-6aZX-90Zb7NFThvDjm-Ej5IJCTkHr2_Aec8gFo1pnsEeOaSlExoGV-39zIY7ISYzvAOkD4JAcUS44U0Ifk7vxbOjbtcM4irbBbhm6VRoX-ajrP_OR7fxoJzrsm7CcB7cjZ-Sgtk3E8-17St4e7l8nT9n05fF5Mp5mrlR6mXFfScWUlExRJ6TwdcEVeI3cYV159AXnVAP3FDiiwpoWzEGlEUpVeCvYKbne5C6G_mOFcWnaEB02jU1HraIRkknQvPwXUllyLhRLMNtAN_QxDlibxRBaO6wNBfNTrUnVGjC_1RpI_nIbvKpa9Du97TKBqy2w0dmmHmznQtw5URZScJnczcbNw2z-FQY0M-zakM6oQv-zlHNDUyxj3_ZRjo4</recordid><startdate>20050101</startdate><enddate>20050101</enddate><creator>Jurado, Valme</creator><creator>Groth, Ingrid</creator><creator>Gonzalez, Juan M</creator><creator>Laiz, Leonila</creator><creator>Saiz-Jimenez, Cesareo</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>7X8</scope></search><sort><creationdate>20050101</creationdate><title>Agromyces salentinus sp. nov. and Agromyces neolithicus sp. nov</title><author>Jurado, Valme ; Groth, Ingrid ; Gonzalez, Juan M ; Laiz, Leonila ; Saiz-Jimenez, Cesareo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c489t-5db783877381c676df2580d9e5cefbded2551905d105ee8ef123c0b9e0482da63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>Actinomycetales - chemistry</topic><topic>Actinomycetales - classification</topic><topic>Actinomycetales - genetics</topic><topic>Actinomycetales - isolation & purification</topic><topic>Agromyces neolithicus</topic><topic>Agromyces salentinus</topic><topic>Animal, plant and microbial ecology</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>DNA, Bacterial - analysis</topic><topic>DNA, Ribosomal - analysis</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes, rRNA</topic><topic>Italy</topic><topic>Microbial ecology</topic><topic>Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Nucleic Acid Hybridization</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Soil</topic><topic>Soil Microbiology</topic><topic>Systematics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jurado, Valme</creatorcontrib><creatorcontrib>Groth, Ingrid</creatorcontrib><creatorcontrib>Gonzalez, Juan M</creatorcontrib><creatorcontrib>Laiz, Leonila</creatorcontrib><creatorcontrib>Saiz-Jimenez, Cesareo</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jurado, Valme</au><au>Groth, Ingrid</au><au>Gonzalez, Juan M</au><au>Laiz, Leonila</au><au>Saiz-Jimenez, Cesareo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Agromyces salentinus sp. nov. and Agromyces neolithicus sp. nov</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2005-01-01</date><risdate>2005</risdate><volume>55</volume><issue>1</issue><spage>153</spage><epage>157</epage><pages>153-157</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 Instituto de Recursos Naturales y Agrobiologia, CSIC, Apartado 1052, 41080 Sevilla, Spain
2 Hans-Knöll-Institut für Naturstoff-Forschung eV, D-07745 Jena, Germany
Correspondence Cesareo Saiz-Jimenez saiz{at}irnase.csic.es
A polyphasic study was carried out to clarify the taxonomic position of two Gram-positive bacteria isolated from soil samples of the Grotta dei Cervi (Italy), a relatively unexplored hypogean environment. The strains, 20-5 T and 23-23 T , showed phenotypic and phylogenetic characteristics that were consistent with their classification in the genus Agromyces . 16S rRNA gene sequence comparisons revealed that the two strains formed distinct phyletic lines within the genus Agromyces . Based on 16S rRNA gene sequence similarity, chemotaxonomic data and the results of DNADNA relatedness studies, it is proposed that the two isolates represent two novel species of the genus Agromyces . Pronounced differences in a broad range of phenotypic characteristics and DNA G+C content distinguished the two strains from each other and from previously described species of the genus Agromyces . Two novel species are proposed: Agromyces salentinus sp. nov. (type strain, 20-5 T =HKI 0320 T =DSM 16198 T =NCIMB 13990 T ) and Agromyces neolithicus sp. nov. (type strain, 23-23 T =HKI 0321 T =DSM 16197 T =NCIMB 13989 T ).
Published online ahead of print on 22 October 2004 as DOI 10.1099/ijs.0.63199-0.
The GenBank/EMBL/DDBJ accession numbers for the 16S rRNA gene sequences of strains 20-5 T and 23-23 T are AY507129 and AY507128 , respectively.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>15653869</pmid><doi>10.1099/ijs.0.63199-0</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Actinomycetales - chemistry Actinomycetales - classification Actinomycetales - genetics Actinomycetales - isolation & purification Agromyces neolithicus Agromyces salentinus Animal, plant and microbial ecology Bacteriology Base Composition Biological and medical sciences DNA, Bacterial - analysis DNA, Ribosomal - analysis Fundamental and applied biological sciences. Psychology Genes, rRNA Italy Microbial ecology Microbiology Molecular Sequence Data Nucleic Acid Hybridization Phenotype Phylogeny RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Soil Soil Microbiology Systematics |
| title | Agromyces salentinus sp. nov. and Agromyces neolithicus sp. nov |
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