Quantum vs. classical models of the nitro group for proton chemical shift calculations and conformational analysis
A model based on classical concepts is derived to describe the effect of the nitro group on proton chemical shifts. The calculated chemical shifts are then compared to ab initio (GIAO) calculated chemical shifts. The accuracy of the two models is assessed using proton chemical shifts of a set of rig...
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Veröffentlicht in: | Journal of computational chemistry 2005-03, Vol.26 (4), p.389-398 |
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description | A model based on classical concepts is derived to describe the effect of the nitro group on proton chemical shifts. The calculated chemical shifts are then compared to ab initio (GIAO) calculated chemical shifts. The accuracy of the two models is assessed using proton chemical shifts of a set of rigid organic nitro compounds that are fully assigned in CDCl3 at 700 MHz. The two methods are then used to evaluate the accuracy of different popular post‐SCF methods (B3LYP and MP2) and molecular mechanics methods (MMX and MMFF94) in calculating the molecular structure of a set of sterically crowded nitro aromatic compounds. Both models perform well on the rigid molecules used as a test set, although when using the GIAO method a general overestimation of the deshielding of protons near the nitro group is observed. The analysis of the sterically crowded molecules shows that the very popular B3LYP/6‐31G(d,p) method produces very poor twist angles for these, and that using a larger basis set [6‐311++G(2d,p)] gives much more reasonable results. The MP2 calculations, on the other hand, overestimate the twist angles, which for these compounds compensates for the deshielding effect generally observed for protons near electronegative atoms when using the GIAO method at the B3LYP/6‐311++G(2d,p) level. The most accurate results are found when the structures are calculated using B3LYP/6‐311++G(2d,p) level of theory, and the chemical shifts are calculated using the CHARGE program based on classical models. © 2005 Wiley Periodicals, Inc. J Comput Chem 26: 389–398, 2005 |
doi_str_mv | 10.1002/jcc.20177 |
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The calculated chemical shifts are then compared to ab initio (GIAO) calculated chemical shifts. The accuracy of the two models is assessed using proton chemical shifts of a set of rigid organic nitro compounds that are fully assigned in CDCl3 at 700 MHz. The two methods are then used to evaluate the accuracy of different popular post‐SCF methods (B3LYP and MP2) and molecular mechanics methods (MMX and MMFF94) in calculating the molecular structure of a set of sterically crowded nitro aromatic compounds. Both models perform well on the rigid molecules used as a test set, although when using the GIAO method a general overestimation of the deshielding of protons near the nitro group is observed. The analysis of the sterically crowded molecules shows that the very popular B3LYP/6‐31G(d,p) method produces very poor twist angles for these, and that using a larger basis set [6‐311++G(2d,p)] gives much more reasonable results. The MP2 calculations, on the other hand, overestimate the twist angles, which for these compounds compensates for the deshielding effect generally observed for protons near electronegative atoms when using the GIAO method at the B3LYP/6‐311++G(2d,p) level. The most accurate results are found when the structures are calculated using B3LYP/6‐311++G(2d,p) level of theory, and the chemical shifts are calculated using the CHARGE program based on classical models. © 2005 Wiley Periodicals, Inc. J Comput Chem 26: 389–398, 2005</description><identifier>ISSN: 0192-8651</identifier><identifier>EISSN: 1096-987X</identifier><identifier>DOI: 10.1002/jcc.20177</identifier><identifier>PMID: 15651034</identifier><identifier>CODEN: JCCHDD</identifier><language>eng</language><publisher>Hoboken: Wiley Subscription Services, Inc., A Wiley Company</publisher><subject>CHARGE ; Chemicals ; GIAO ; nitro compounds ; proton chemical shifts ; Protons ; Quantum theory</subject><ispartof>Journal of computational chemistry, 2005-03, Vol.26 (4), p.389-398</ispartof><rights>Copyright © 2005 Wiley Periodicals, Inc.</rights><rights>Copyright 2005 Wiley Periodicals, Inc.</rights><rights>Copyright John Wiley and Sons, Limited Mar 2005</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3887-29c2a787df81b888eb698753b67a4ff921ecfbb3465de7877d286d9028b6e7753</citedby><cites>FETCH-LOGICAL-c3887-29c2a787df81b888eb698753b67a4ff921ecfbb3465de7877d286d9028b6e7753</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fjcc.20177$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fjcc.20177$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15651034$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mobli, Mehdi</creatorcontrib><creatorcontrib>Abraham, Raymond J.</creatorcontrib><title>Quantum vs. classical models of the nitro group for proton chemical shift calculations and conformational analysis</title><title>Journal of computational chemistry</title><addtitle>J. Comput. Chem</addtitle><description>A model based on classical concepts is derived to describe the effect of the nitro group on proton chemical shifts. The calculated chemical shifts are then compared to ab initio (GIAO) calculated chemical shifts. The accuracy of the two models is assessed using proton chemical shifts of a set of rigid organic nitro compounds that are fully assigned in CDCl3 at 700 MHz. The two methods are then used to evaluate the accuracy of different popular post‐SCF methods (B3LYP and MP2) and molecular mechanics methods (MMX and MMFF94) in calculating the molecular structure of a set of sterically crowded nitro aromatic compounds. Both models perform well on the rigid molecules used as a test set, although when using the GIAO method a general overestimation of the deshielding of protons near the nitro group is observed. The analysis of the sterically crowded molecules shows that the very popular B3LYP/6‐31G(d,p) method produces very poor twist angles for these, and that using a larger basis set [6‐311++G(2d,p)] gives much more reasonable results. The MP2 calculations, on the other hand, overestimate the twist angles, which for these compounds compensates for the deshielding effect generally observed for protons near electronegative atoms when using the GIAO method at the B3LYP/6‐311++G(2d,p) level. The most accurate results are found when the structures are calculated using B3LYP/6‐311++G(2d,p) level of theory, and the chemical shifts are calculated using the CHARGE program based on classical models. © 2005 Wiley Periodicals, Inc. J Comput Chem 26: 389–398, 2005</description><subject>CHARGE</subject><subject>Chemicals</subject><subject>GIAO</subject><subject>nitro compounds</subject><subject>proton chemical shifts</subject><subject>Protons</subject><subject>Quantum theory</subject><issn>0192-8651</issn><issn>1096-987X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><recordid>eNp10c1uEzEQAGALUdFQeuAFkMUBqYdNbW_8s0cUtaVVC7RqKTfL67WJw-46eHahefu6SQAJCR9sa_R5NONB6DUlU0oIO15aO2WESvkMTSipRFEp-fU5mhBasUIJTvfRS4AlIaTkYvYC7VOeg6ScTVC6Hk0_jB3-CVNsWwMQrGlxFxvXAo4eDwuH-zCkiL-lOK6wjwmvUhxij-3CdRsNi-AHnG92bM0QYg_Y9A22sc-620SyMnlbQ4BXaM-bFtzh7jxAd6cnt_MPxeWns_P5-8vClkrJglWWGalk4xWtlVKuFrktXtZCmpn3FaPO-rouZ4I3LjvZMCWaijBVCyczPEDvtnlzuT9GB4PuAljXtqZ3cQQtZMm5qliGb_-ByzimXC1olpdiUoiMjrbIpgiQnNerFDqT1poS_TQFnaegN1PI9s0u4Vh3rvkrd9-ewfEW_AqtW_8_k76Yz3-nLLYvAgzu4c8Lk74_9SG5vv94pm-u7vmXG0n15_IRsKWhRA</recordid><startdate>200503</startdate><enddate>200503</enddate><creator>Mobli, Mehdi</creator><creator>Abraham, Raymond J.</creator><general>Wiley Subscription Services, Inc., A Wiley Company</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>JQ2</scope><scope>7X8</scope></search><sort><creationdate>200503</creationdate><title>Quantum vs. classical models of the nitro group for proton chemical shift calculations and conformational analysis</title><author>Mobli, Mehdi ; Abraham, Raymond J.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3887-29c2a787df81b888eb698753b67a4ff921ecfbb3465de7877d286d9028b6e7753</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2005</creationdate><topic>CHARGE</topic><topic>Chemicals</topic><topic>GIAO</topic><topic>nitro compounds</topic><topic>proton chemical shifts</topic><topic>Protons</topic><topic>Quantum theory</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mobli, Mehdi</creatorcontrib><creatorcontrib>Abraham, Raymond J.</creatorcontrib><collection>Istex</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Computer Science Collection</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of computational chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mobli, Mehdi</au><au>Abraham, Raymond J.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Quantum vs. classical models of the nitro group for proton chemical shift calculations and conformational analysis</atitle><jtitle>Journal of computational chemistry</jtitle><addtitle>J. Comput. Chem</addtitle><date>2005-03</date><risdate>2005</risdate><volume>26</volume><issue>4</issue><spage>389</spage><epage>398</epage><pages>389-398</pages><issn>0192-8651</issn><eissn>1096-987X</eissn><coden>JCCHDD</coden><abstract>A model based on classical concepts is derived to describe the effect of the nitro group on proton chemical shifts. The calculated chemical shifts are then compared to ab initio (GIAO) calculated chemical shifts. The accuracy of the two models is assessed using proton chemical shifts of a set of rigid organic nitro compounds that are fully assigned in CDCl3 at 700 MHz. The two methods are then used to evaluate the accuracy of different popular post‐SCF methods (B3LYP and MP2) and molecular mechanics methods (MMX and MMFF94) in calculating the molecular structure of a set of sterically crowded nitro aromatic compounds. Both models perform well on the rigid molecules used as a test set, although when using the GIAO method a general overestimation of the deshielding of protons near the nitro group is observed. The analysis of the sterically crowded molecules shows that the very popular B3LYP/6‐31G(d,p) method produces very poor twist angles for these, and that using a larger basis set [6‐311++G(2d,p)] gives much more reasonable results. The MP2 calculations, on the other hand, overestimate the twist angles, which for these compounds compensates for the deshielding effect generally observed for protons near electronegative atoms when using the GIAO method at the B3LYP/6‐311++G(2d,p) level. The most accurate results are found when the structures are calculated using B3LYP/6‐311++G(2d,p) level of theory, and the chemical shifts are calculated using the CHARGE program based on classical models. © 2005 Wiley Periodicals, Inc. J Comput Chem 26: 389–398, 2005</abstract><cop>Hoboken</cop><pub>Wiley Subscription Services, Inc., A Wiley Company</pub><pmid>15651034</pmid><doi>10.1002/jcc.20177</doi><tpages>10</tpages></addata></record> |
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subjects | CHARGE Chemicals GIAO nitro compounds proton chemical shifts Protons Quantum theory |
title | Quantum vs. classical models of the nitro group for proton chemical shift calculations and conformational analysis |
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