Anaerofustis stercorihominis gen. nov., sp. nov., from human feces
Phenotypic and phylogenetic studies were performed on an unidentified Gram-positive, strictly anaerobic, non-spore-forming, rod-shaped bacterium isolated from human feces. The organism was catalase-negative, resistant to 20% bile, produced acetic and butyric acids as end products of glucose metaboli...
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| Veröffentlicht in: | Anaerobe 2004-02, Vol.10 (1), p.41-45 |
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| creator | Finegold, Sydney M Lawson, Paul A Vaisanen, Marja-Liisa Molitoris, Denise R Song, Yuli Liu, Chengxu Collins, Matthew D |
| description | Phenotypic and phylogenetic studies were performed on an unidentified Gram-positive, strictly anaerobic, non-spore-forming, rod-shaped bacterium isolated from human feces. The organism was catalase-negative, resistant to 20% bile, produced acetic and butyric acids as end products of glucose metabolism, and possessed a G+C content of approximately 70
mol%. Comparative 16S rRNA gene sequencing demonstrated that the unidentified bacterium was a member of the
Clostridium sub-phylum of the Gram-positive bacteria, and formed a loose association with rRNA cluster XV. Sequence divergence values of 12% or greater were observed between the unidentified bacterium and all other recognized species within this and related rRNA clusters. Treeing analysis showed the unknown anaerobe formed a deep line branching near to the base of rRNA cluster XV and phylogenetically represents a hitherto unknown taxon, distinct from
Acetobacterium,
Eubacterium sensu stricto,
Pseudoramibacter and other related organisms. Based on both phylogenetic and phenotypic evidence, it is proposed that the unknown bacterium from feces be classified in a new genus
Anaerofustis, as
Anaerofustis stercorihominis sp. nov. The type strain of
Anaerofustis stercorihominis is ATCC BAA-858
T=CCUG 47767
T. |
| doi_str_mv | 10.1016/j.anaerobe.2003.10.002 |
| format | Article |
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mol%. Comparative 16S rRNA gene sequencing demonstrated that the unidentified bacterium was a member of the
Clostridium sub-phylum of the Gram-positive bacteria, and formed a loose association with rRNA cluster XV. Sequence divergence values of 12% or greater were observed between the unidentified bacterium and all other recognized species within this and related rRNA clusters. Treeing analysis showed the unknown anaerobe formed a deep line branching near to the base of rRNA cluster XV and phylogenetically represents a hitherto unknown taxon, distinct from
Acetobacterium,
Eubacterium sensu stricto,
Pseudoramibacter and other related organisms. Based on both phylogenetic and phenotypic evidence, it is proposed that the unknown bacterium from feces be classified in a new genus
Anaerofustis, as
Anaerofustis stercorihominis sp. nov. The type strain of
Anaerofustis stercorihominis is ATCC BAA-858
T=CCUG 47767
T.</description><identifier>ISSN: 1075-9964</identifier><identifier>EISSN: 1095-8274</identifier><identifier>DOI: 10.1016/j.anaerobe.2003.10.002</identifier><identifier>PMID: 16701499</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Anaerofustis stercorihominis gen. nov., sp. nov ; Feces-16S rRNA ; Phylogeny ; Taxonomy</subject><ispartof>Anaerobe, 2004-02, Vol.10 (1), p.41-45</ispartof><rights>2003 Elsevier Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c364t-3454ca5a3bb786e02ec24c095a23b5b553fe6dcdd96a3cd4261b7ff55ba8b1dc3</citedby><cites>FETCH-LOGICAL-c364t-3454ca5a3bb786e02ec24c095a23b5b553fe6dcdd96a3cd4261b7ff55ba8b1dc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1075996403001641$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27903,27904,65309</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16701499$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Finegold, Sydney M</creatorcontrib><creatorcontrib>Lawson, Paul A</creatorcontrib><creatorcontrib>Vaisanen, Marja-Liisa</creatorcontrib><creatorcontrib>Molitoris, Denise R</creatorcontrib><creatorcontrib>Song, Yuli</creatorcontrib><creatorcontrib>Liu, Chengxu</creatorcontrib><creatorcontrib>Collins, Matthew D</creatorcontrib><title>Anaerofustis stercorihominis gen. nov., sp. nov., from human feces</title><title>Anaerobe</title><addtitle>Anaerobe</addtitle><description>Phenotypic and phylogenetic studies were performed on an unidentified Gram-positive, strictly anaerobic, non-spore-forming, rod-shaped bacterium isolated from human feces. The organism was catalase-negative, resistant to 20% bile, produced acetic and butyric acids as end products of glucose metabolism, and possessed a G+C content of approximately 70
mol%. Comparative 16S rRNA gene sequencing demonstrated that the unidentified bacterium was a member of the
Clostridium sub-phylum of the Gram-positive bacteria, and formed a loose association with rRNA cluster XV. Sequence divergence values of 12% or greater were observed between the unidentified bacterium and all other recognized species within this and related rRNA clusters. Treeing analysis showed the unknown anaerobe formed a deep line branching near to the base of rRNA cluster XV and phylogenetically represents a hitherto unknown taxon, distinct from
Acetobacterium,
Eubacterium sensu stricto,
Pseudoramibacter and other related organisms. Based on both phylogenetic and phenotypic evidence, it is proposed that the unknown bacterium from feces be classified in a new genus
Anaerofustis, as
Anaerofustis stercorihominis sp. nov. The type strain of
Anaerofustis stercorihominis is ATCC BAA-858
T=CCUG 47767
T.</description><subject>Anaerofustis stercorihominis gen. nov., sp. nov</subject><subject>Feces-16S rRNA</subject><subject>Phylogeny</subject><subject>Taxonomy</subject><issn>1075-9964</issn><issn>1095-8274</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><recordid>eNqFkMlOwzAQhi0EolB4hSonTiTY8ZLmRqnYpEpc4Gx5mVBXTVzspBJvj0tbceQ0i_6Zf-ZDaEJwQTARd6tCdQqC11CUGNPULDAuT9AFwTXPp2XFTnd5xfO6FmyELmNcYUwI4_wcjYioMGF1fYEeZr9rmiH2Lmaxh2B8cEvfui7Vn9AVWee3xW0WN8esCb7NlkOruqwBA_EKnTVqHeH6EMfo4-nxff6SL96eX-ezRW6oYH1OGWdGcUW1rqYCcAmmZCZdq0qqueacNiCssbYWihrLSkF01TScazXVxBo6Rjf7vZvgvwaIvWxdNLBeqw78EKWoKMGciiQUe6EJPsYAjdwE16rwLQmWO3pyJY_05I7erp_opcHJwWHQLdi_sQOuJLjfCyD9uXUQZDQOOgPWBTC9tN795_EDAtCDxw</recordid><startdate>20040201</startdate><enddate>20040201</enddate><creator>Finegold, Sydney M</creator><creator>Lawson, Paul A</creator><creator>Vaisanen, Marja-Liisa</creator><creator>Molitoris, Denise R</creator><creator>Song, Yuli</creator><creator>Liu, Chengxu</creator><creator>Collins, Matthew D</creator><general>Elsevier Ltd</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20040201</creationdate><title>Anaerofustis stercorihominis gen. nov., sp. nov., from human feces</title><author>Finegold, Sydney M ; Lawson, Paul A ; Vaisanen, Marja-Liisa ; Molitoris, Denise R ; Song, Yuli ; Liu, Chengxu ; Collins, Matthew D</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c364t-3454ca5a3bb786e02ec24c095a23b5b553fe6dcdd96a3cd4261b7ff55ba8b1dc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Anaerofustis stercorihominis gen. nov., sp. nov</topic><topic>Feces-16S rRNA</topic><topic>Phylogeny</topic><topic>Taxonomy</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Finegold, Sydney M</creatorcontrib><creatorcontrib>Lawson, Paul A</creatorcontrib><creatorcontrib>Vaisanen, Marja-Liisa</creatorcontrib><creatorcontrib>Molitoris, Denise R</creatorcontrib><creatorcontrib>Song, Yuli</creatorcontrib><creatorcontrib>Liu, Chengxu</creatorcontrib><creatorcontrib>Collins, Matthew D</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Anaerobe</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Finegold, Sydney M</au><au>Lawson, Paul A</au><au>Vaisanen, Marja-Liisa</au><au>Molitoris, Denise R</au><au>Song, Yuli</au><au>Liu, Chengxu</au><au>Collins, Matthew D</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Anaerofustis stercorihominis gen. nov., sp. nov., from human feces</atitle><jtitle>Anaerobe</jtitle><addtitle>Anaerobe</addtitle><date>2004-02-01</date><risdate>2004</risdate><volume>10</volume><issue>1</issue><spage>41</spage><epage>45</epage><pages>41-45</pages><issn>1075-9964</issn><eissn>1095-8274</eissn><abstract>Phenotypic and phylogenetic studies were performed on an unidentified Gram-positive, strictly anaerobic, non-spore-forming, rod-shaped bacterium isolated from human feces. The organism was catalase-negative, resistant to 20% bile, produced acetic and butyric acids as end products of glucose metabolism, and possessed a G+C content of approximately 70
mol%. Comparative 16S rRNA gene sequencing demonstrated that the unidentified bacterium was a member of the
Clostridium sub-phylum of the Gram-positive bacteria, and formed a loose association with rRNA cluster XV. Sequence divergence values of 12% or greater were observed between the unidentified bacterium and all other recognized species within this and related rRNA clusters. Treeing analysis showed the unknown anaerobe formed a deep line branching near to the base of rRNA cluster XV and phylogenetically represents a hitherto unknown taxon, distinct from
Acetobacterium,
Eubacterium sensu stricto,
Pseudoramibacter and other related organisms. Based on both phylogenetic and phenotypic evidence, it is proposed that the unknown bacterium from feces be classified in a new genus
Anaerofustis, as
Anaerofustis stercorihominis sp. nov. The type strain of
Anaerofustis stercorihominis is ATCC BAA-858
T=CCUG 47767
T.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>16701499</pmid><doi>10.1016/j.anaerobe.2003.10.002</doi><tpages>5</tpages></addata></record> |
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| subjects | Anaerofustis stercorihominis gen. nov., sp. nov Feces-16S rRNA Phylogeny Taxonomy |
| title | Anaerofustis stercorihominis gen. nov., sp. nov., from human feces |
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