Biogeography of the stygobitic isopod Pygolabis (Malacostraca: Tainisopidae) in the Pilbara, Western Australia: Evidence for multiple colonisations of the groundwater
COI sequence variation in groundwater amphipods of Western Australia showed multiple highly divergent lineages associated with tributaries. Estimates of the timing of this diversification are consistent with the hypothesis that aridification of the region during the Tertiary forced freshwater fauna...
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| Veröffentlicht in: | Molecular phylogenetics and evolution 2009-08, Vol.52 (2), p.448-460 |
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| creator | Finston, Terrie L. Francis, Cara J. Johnson, Michael S. |
| description | COI sequence variation in groundwater amphipods of Western Australia showed multiple highly divergent lineages associated with tributaries. Estimates of the timing of this diversification are consistent with the hypothesis that aridification of the region during the Tertiary forced freshwater fauna into subterranean refugia. The groundwater isopod
Pygolabis provides an opportunity to compare phylogenetic signals in co-distributed taxa that might share similar histories. A 549
bp fragment of COI was sequenced for 135 individuals of
Pygolabis from 12 sites. Phylogenetic analyses revealed 12 highly divergent lineages associated with tributary boundaries. Lineages were separated by 11.8–27.8% sequence divergence. This level of divergence is consistent with diversification in the Pliocene, supporting the aridification hypothesis. While lineages were associated with distinct tributaries in both amphipods and
Pygolabis, the two groups showed different phylogenetic patterns, suggesting that the mode of colonisation of the groundwater differed between the amphipods and
Pygolabis. |
| doi_str_mv | 10.1016/j.ympev.2009.03.006 |
| format | Article |
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Pygolabis provides an opportunity to compare phylogenetic signals in co-distributed taxa that might share similar histories. A 549
bp fragment of COI was sequenced for 135 individuals of
Pygolabis from 12 sites. Phylogenetic analyses revealed 12 highly divergent lineages associated with tributary boundaries. Lineages were separated by 11.8–27.8% sequence divergence. This level of divergence is consistent with diversification in the Pliocene, supporting the aridification hypothesis. While lineages were associated with distinct tributaries in both amphipods and
Pygolabis, the two groups showed different phylogenetic patterns, suggesting that the mode of colonisation of the groundwater differed between the amphipods and
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Pygolabis provides an opportunity to compare phylogenetic signals in co-distributed taxa that might share similar histories. A 549
bp fragment of COI was sequenced for 135 individuals of
Pygolabis from 12 sites. Phylogenetic analyses revealed 12 highly divergent lineages associated with tributary boundaries. Lineages were separated by 11.8–27.8% sequence divergence. This level of divergence is consistent with diversification in the Pliocene, supporting the aridification hypothesis. While lineages were associated with distinct tributaries in both amphipods and
Pygolabis, the two groups showed different phylogenetic patterns, suggesting that the mode of colonisation of the groundwater differed between the amphipods and
Pygolabis.</description><subject>Amphipod</subject><subject>Amphipoda - genetics</subject><subject>Animals</subject><subject>Bayes Theorem</subject><subject>COI</subject><subject>Crustacea</subject><subject>Divergence rates</subject><subject>DNA, Mitochondrial - genetics</subject><subject>Evolution, Molecular</subject><subject>Fresh Water</subject><subject>Freshwater</subject><subject>Genetic Speciation</subject><subject>Geography</subject><subject>Groundwater</subject><subject>Haplotypes</subject><subject>Isopoda - classification</subject><subject>Isopoda - genetics</subject><subject>Likelihood Functions</subject><subject>Models, Genetic</subject><subject>Phylogeny</subject><subject>Pygolabis</subject><subject>Sequence Alignment</subject><subject>Sequence Analysis, DNA</subject><subject>Stygofauna</subject><subject>Western Australia</subject><issn>1055-7903</issn><issn>1095-9513</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1u1DAUhSNERUvhCZCQVwgkEq7jOBkjsShVoZWK6KKIpeXYN1OPnDi1k0HzQjwnTmcQO7qyZX_n3J-TZa8oFBRo_WFT7PoRt0UJIApgBUD9JDuhIHguOGVPlzvneSOAHWfPY9wAUMoFf5YdU8GAVbw6yX5_tn6Nfh3UeLcjviPTHZI47da-tZPVxEY_ekNu0oNTrY3k7TfllPZxCkqrj-RW2WFhrFH4jtjhQX9jXauCek9-YpwwDORsXnhnk-Biaw0OGknnA-lnN9nRIdHe-eSjJuuH-LeNdfDzYH6pZPEiO-qUi_jycJ5mP75c3J5f5tffv16dn13nOk0z5SYNJbDltGW64SWrV62q1aqrEMDgCkzaEZr0W2FXlrqpRV2aulM1Au90Jdhp9mbvOwZ_P6fuZW-jRufUgH6Osm4YlA3jj4IplKZkgiWQ7UEdfIwBOzkG26uwkxTkkqPcyIccF4mQwGTqMaleH-zntkfzT3MILgGf9gCmbWwtBhm1XfZqbEA9SePtfwv8AcJ3s5I</recordid><startdate>20090801</startdate><enddate>20090801</enddate><creator>Finston, Terrie L.</creator><creator>Francis, Cara J.</creator><creator>Johnson, Michael S.</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QH</scope><scope>7UA</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>7X8</scope></search><sort><creationdate>20090801</creationdate><title>Biogeography of the stygobitic isopod Pygolabis (Malacostraca: Tainisopidae) in the Pilbara, Western Australia: Evidence for multiple colonisations of the groundwater</title><author>Finston, Terrie L. ; Francis, Cara J. ; Johnson, Michael S.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c454t-d3459eb51b3c752368ba6a8f4e00de80d006ed1b34ef22c76962d6fa6e05fc493</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Amphipod</topic><topic>Amphipoda - genetics</topic><topic>Animals</topic><topic>Bayes Theorem</topic><topic>COI</topic><topic>Crustacea</topic><topic>Divergence rates</topic><topic>DNA, Mitochondrial - genetics</topic><topic>Evolution, Molecular</topic><topic>Fresh Water</topic><topic>Freshwater</topic><topic>Genetic Speciation</topic><topic>Geography</topic><topic>Groundwater</topic><topic>Haplotypes</topic><topic>Isopoda - classification</topic><topic>Isopoda - genetics</topic><topic>Likelihood Functions</topic><topic>Models, Genetic</topic><topic>Phylogeny</topic><topic>Pygolabis</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, DNA</topic><topic>Stygofauna</topic><topic>Western Australia</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Finston, Terrie L.</creatorcontrib><creatorcontrib>Francis, Cara J.</creatorcontrib><creatorcontrib>Johnson, Michael S.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aqualine</collection><collection>Water Resources Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular phylogenetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Finston, Terrie L.</au><au>Francis, Cara J.</au><au>Johnson, Michael S.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Biogeography of the stygobitic isopod Pygolabis (Malacostraca: Tainisopidae) in the Pilbara, Western Australia: Evidence for multiple colonisations of the groundwater</atitle><jtitle>Molecular phylogenetics and evolution</jtitle><addtitle>Mol Phylogenet Evol</addtitle><date>2009-08-01</date><risdate>2009</risdate><volume>52</volume><issue>2</issue><spage>448</spage><epage>460</epage><pages>448-460</pages><issn>1055-7903</issn><eissn>1095-9513</eissn><abstract>COI sequence variation in groundwater amphipods of Western Australia showed multiple highly divergent lineages associated with tributaries. Estimates of the timing of this diversification are consistent with the hypothesis that aridification of the region during the Tertiary forced freshwater fauna into subterranean refugia. The groundwater isopod
Pygolabis provides an opportunity to compare phylogenetic signals in co-distributed taxa that might share similar histories. A 549
bp fragment of COI was sequenced for 135 individuals of
Pygolabis from 12 sites. Phylogenetic analyses revealed 12 highly divergent lineages associated with tributary boundaries. Lineages were separated by 11.8–27.8% sequence divergence. This level of divergence is consistent with diversification in the Pliocene, supporting the aridification hypothesis. While lineages were associated with distinct tributaries in both amphipods and
Pygolabis, the two groups showed different phylogenetic patterns, suggesting that the mode of colonisation of the groundwater differed between the amphipods and
Pygolabis.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>19303454</pmid><doi>10.1016/j.ympev.2009.03.006</doi><tpages>13</tpages></addata></record> |
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| language | eng |
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| source | MEDLINE; Elsevier ScienceDirect Journals Complete |
| subjects | Amphipod Amphipoda - genetics Animals Bayes Theorem COI Crustacea Divergence rates DNA, Mitochondrial - genetics Evolution, Molecular Fresh Water Freshwater Genetic Speciation Geography Groundwater Haplotypes Isopoda - classification Isopoda - genetics Likelihood Functions Models, Genetic Phylogeny Pygolabis Sequence Alignment Sequence Analysis, DNA Stygofauna Western Australia |
| title | Biogeography of the stygobitic isopod Pygolabis (Malacostraca: Tainisopidae) in the Pilbara, Western Australia: Evidence for multiple colonisations of the groundwater |
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