Killer cell immunoglobulin-like receptor genotypes in Behçet's disease patients: any role for the 3DP1001/002 pseudogene?
Genotypic profiles of the natural killer cell immunoglobulin-like receptors (KIR) have been reported to vary among different ethnic groups and variable clinical entities. This study represents the second report on its distribution among patients with Behçet's disease (BD). We studied 43 unrelat...
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Veröffentlicht in: | Genetic testing and molecular biomarkers 2009-06, Vol.13 (3), p.319-324 |
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creator | Arayssi, Thourayya K El Hajj, Nady Shamseddine, Wael Ibrahim, Georges Nasr, John Sabbagh, Amira S Greige, Layal Zaatari, Ghazi S Mahfouz, Rami A R |
description | Genotypic profiles of the natural killer cell immunoglobulin-like receptors (KIR) have been reported to vary among different ethnic groups and variable clinical entities. This study represents the second report on its distribution among patients with Behçet's disease (BD). We studied 43 unrelated Lebanese Behçet's patients, had their DNA typed using sequence-specific primer technique for the presence of 16 KIR genes and pseudogenes loci, and compared them to the general Lebanese population.
In addition to sharing common features with the general population, the AA genotype was still the most frequent--however, with five new KIR profiles identified. There was no statistically significant distribution of the different KIR genes between the cases (BD patients) and controls (Lebanese population); however, KIR3DP1*001/002 was found to be significantly different between the BD patients and the Lebanese population, but this significance was lost after correction for all KIR loci.
The results lead to an interesting future research question of whether or not KIR genotype is involved in the predisposition to or pathogenesis of BD especially that a pseudogene is controversially in question. This is the second report that describes the KIR genotypic profile in such an important clinical disease but the first to shed a light on the possible role of a pseudogene. |
doi_str_mv | 10.1089/gtmb.2008.0108 |
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In addition to sharing common features with the general population, the AA genotype was still the most frequent--however, with five new KIR profiles identified. There was no statistically significant distribution of the different KIR genes between the cases (BD patients) and controls (Lebanese population); however, KIR3DP1*001/002 was found to be significantly different between the BD patients and the Lebanese population, but this significance was lost after correction for all KIR loci.
The results lead to an interesting future research question of whether or not KIR genotype is involved in the predisposition to or pathogenesis of BD especially that a pseudogene is controversially in question. This is the second report that describes the KIR genotypic profile in such an important clinical disease but the first to shed a light on the possible role of a pseudogene.</description><identifier>ISSN: 1945-0265</identifier><identifier>EISSN: 1945-0257</identifier><identifier>DOI: 10.1089/gtmb.2008.0108</identifier><identifier>PMID: 19405872</identifier><language>eng</language><publisher>United States: Mary Ann Liebert, Inc</publisher><subject>Behcet Syndrome - genetics ; Behcet's disease ; Case-Control Studies ; Diagnosis ; Gene Frequency ; Genetic aspects ; Genotype ; Haplotypes ; Health aspects ; Humans ; Immunoglobulins ; Killer Cells, Natural - immunology ; Lebanon ; Pseudogenes ; Receptors, KIR - genetics</subject><ispartof>Genetic testing and molecular biomarkers, 2009-06, Vol.13 (3), p.319-324</ispartof><rights>COPYRIGHT 2009 Mary Ann Liebert, Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c363t-69f72de3358c0cc9bed4ec29d1e2dbfd72959567f1dbc257a189135b9a79e6e3</citedby><cites>FETCH-LOGICAL-c363t-69f72de3358c0cc9bed4ec29d1e2dbfd72959567f1dbc257a189135b9a79e6e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19405872$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Arayssi, Thourayya K</creatorcontrib><creatorcontrib>El Hajj, Nady</creatorcontrib><creatorcontrib>Shamseddine, Wael</creatorcontrib><creatorcontrib>Ibrahim, Georges</creatorcontrib><creatorcontrib>Nasr, John</creatorcontrib><creatorcontrib>Sabbagh, Amira S</creatorcontrib><creatorcontrib>Greige, Layal</creatorcontrib><creatorcontrib>Zaatari, Ghazi S</creatorcontrib><creatorcontrib>Mahfouz, Rami A R</creatorcontrib><title>Killer cell immunoglobulin-like receptor genotypes in Behçet's disease patients: any role for the 3DP1001/002 pseudogene?</title><title>Genetic testing and molecular biomarkers</title><addtitle>Genet Test Mol Biomarkers</addtitle><description>Genotypic profiles of the natural killer cell immunoglobulin-like receptors (KIR) have been reported to vary among different ethnic groups and variable clinical entities. This study represents the second report on its distribution among patients with Behçet's disease (BD). We studied 43 unrelated Lebanese Behçet's patients, had their DNA typed using sequence-specific primer technique for the presence of 16 KIR genes and pseudogenes loci, and compared them to the general Lebanese population.
In addition to sharing common features with the general population, the AA genotype was still the most frequent--however, with five new KIR profiles identified. There was no statistically significant distribution of the different KIR genes between the cases (BD patients) and controls (Lebanese population); however, KIR3DP1*001/002 was found to be significantly different between the BD patients and the Lebanese population, but this significance was lost after correction for all KIR loci.
The results lead to an interesting future research question of whether or not KIR genotype is involved in the predisposition to or pathogenesis of BD especially that a pseudogene is controversially in question. This is the second report that describes the KIR genotypic profile in such an important clinical disease but the first to shed a light on the possible role of a pseudogene.</description><subject>Behcet Syndrome - genetics</subject><subject>Behcet's disease</subject><subject>Case-Control Studies</subject><subject>Diagnosis</subject><subject>Gene Frequency</subject><subject>Genetic aspects</subject><subject>Genotype</subject><subject>Haplotypes</subject><subject>Health aspects</subject><subject>Humans</subject><subject>Immunoglobulins</subject><subject>Killer Cells, Natural - immunology</subject><subject>Lebanon</subject><subject>Pseudogenes</subject><subject>Receptors, KIR - genetics</subject><issn>1945-0265</issn><issn>1945-0257</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkbtuFTEQhi0EIhdoKZErqPbEl2N7TYNCwiVKpFCkX3nt2RODd73Y3uLwQnkQXgyvckRKNMWMx_8_8vhD6A0lG0pafbYrY79hhLQbUs_P0DHVW9EQJtTzf7UUR-gk5x-EyC1v5Ut0VC-IaBU7Rr-vfQiQsIUQsB_HZYq7EPsl-KkJ_ifgBBbmEhPewRTLfoaM_YQ_wf2fByjvM3Y-g8mAZ1M8TCV_wGba4xQD4KG6yj1gfvmdEkLPCGF4zrC4WGfBx1foxWBChteHfIruvny-u_jW3Nx-vbo4v2ksl7w0Ug-KOeBctJZYq3twW7BMOwrM9YNTTAstpBqo623d29BWUy56bZQGCfwUvXscO6f4a4FcutHndV0zQVxyJxVTWrXiv0JGaf1oyatw8yjcmQCdn4ZYkrE1HIzexgkGX_vnbCUiuWqfDDbFnBMM3Zz8aNK-o6RbMXYrxm7F2K2manh7eMrSj-Ce5Adu_C9DSZmU</recordid><startdate>20090601</startdate><enddate>20090601</enddate><creator>Arayssi, Thourayya K</creator><creator>El Hajj, Nady</creator><creator>Shamseddine, Wael</creator><creator>Ibrahim, Georges</creator><creator>Nasr, John</creator><creator>Sabbagh, Amira S</creator><creator>Greige, Layal</creator><creator>Zaatari, Ghazi S</creator><creator>Mahfouz, Rami A R</creator><general>Mary Ann Liebert, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7T5</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20090601</creationdate><title>Killer cell immunoglobulin-like receptor genotypes in Behçet's disease patients: any role for the 3DP1001/002 pseudogene?</title><author>Arayssi, Thourayya K ; El Hajj, Nady ; Shamseddine, Wael ; Ibrahim, Georges ; Nasr, John ; Sabbagh, Amira S ; Greige, Layal ; Zaatari, Ghazi S ; Mahfouz, Rami A R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c363t-69f72de3358c0cc9bed4ec29d1e2dbfd72959567f1dbc257a189135b9a79e6e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Behcet Syndrome - genetics</topic><topic>Behcet's disease</topic><topic>Case-Control Studies</topic><topic>Diagnosis</topic><topic>Gene Frequency</topic><topic>Genetic aspects</topic><topic>Genotype</topic><topic>Haplotypes</topic><topic>Health aspects</topic><topic>Humans</topic><topic>Immunoglobulins</topic><topic>Killer Cells, Natural - immunology</topic><topic>Lebanon</topic><topic>Pseudogenes</topic><topic>Receptors, KIR - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Arayssi, Thourayya K</creatorcontrib><creatorcontrib>El Hajj, Nady</creatorcontrib><creatorcontrib>Shamseddine, Wael</creatorcontrib><creatorcontrib>Ibrahim, Georges</creatorcontrib><creatorcontrib>Nasr, John</creatorcontrib><creatorcontrib>Sabbagh, Amira S</creatorcontrib><creatorcontrib>Greige, Layal</creatorcontrib><creatorcontrib>Zaatari, Ghazi S</creatorcontrib><creatorcontrib>Mahfouz, Rami A R</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Immunology Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Genetic testing and molecular biomarkers</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Arayssi, Thourayya K</au><au>El Hajj, Nady</au><au>Shamseddine, Wael</au><au>Ibrahim, Georges</au><au>Nasr, John</au><au>Sabbagh, Amira S</au><au>Greige, Layal</au><au>Zaatari, Ghazi S</au><au>Mahfouz, Rami A R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Killer cell immunoglobulin-like receptor genotypes in Behçet's disease patients: any role for the 3DP1001/002 pseudogene?</atitle><jtitle>Genetic testing and molecular biomarkers</jtitle><addtitle>Genet Test Mol Biomarkers</addtitle><date>2009-06-01</date><risdate>2009</risdate><volume>13</volume><issue>3</issue><spage>319</spage><epage>324</epage><pages>319-324</pages><issn>1945-0265</issn><eissn>1945-0257</eissn><abstract>Genotypic profiles of the natural killer cell immunoglobulin-like receptors (KIR) have been reported to vary among different ethnic groups and variable clinical entities. This study represents the second report on its distribution among patients with Behçet's disease (BD). We studied 43 unrelated Lebanese Behçet's patients, had their DNA typed using sequence-specific primer technique for the presence of 16 KIR genes and pseudogenes loci, and compared them to the general Lebanese population.
In addition to sharing common features with the general population, the AA genotype was still the most frequent--however, with five new KIR profiles identified. There was no statistically significant distribution of the different KIR genes between the cases (BD patients) and controls (Lebanese population); however, KIR3DP1*001/002 was found to be significantly different between the BD patients and the Lebanese population, but this significance was lost after correction for all KIR loci.
The results lead to an interesting future research question of whether or not KIR genotype is involved in the predisposition to or pathogenesis of BD especially that a pseudogene is controversially in question. This is the second report that describes the KIR genotypic profile in such an important clinical disease but the first to shed a light on the possible role of a pseudogene.</abstract><cop>United States</cop><pub>Mary Ann Liebert, Inc</pub><pmid>19405872</pmid><doi>10.1089/gtmb.2008.0108</doi><tpages>6</tpages></addata></record> |
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subjects | Behcet Syndrome - genetics Behcet's disease Case-Control Studies Diagnosis Gene Frequency Genetic aspects Genotype Haplotypes Health aspects Humans Immunoglobulins Killer Cells, Natural - immunology Lebanon Pseudogenes Receptors, KIR - genetics |
title | Killer cell immunoglobulin-like receptor genotypes in Behçet's disease patients: any role for the 3DP1001/002 pseudogene? |
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