Evidence of interspecies transmission and reassortment among avian group A rotaviruses
Abstract Avian rotaviruses are broadly distributed among birds, but only scarcely characterized on the molecular level. The VP4-, VP6-, VP7- and NSP5-encoding sequences of eight group A rotaviruses from chickens and turkeys determined here indicate a low degree of sequence similarity with mammalian...
Gespeichert in:
| Veröffentlicht in: | Virology (New York, N.Y.) N.Y.), 2009-04, Vol.386 (2), p.334-343 |
|---|---|
| Hauptverfasser: | , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 343 |
|---|---|
| container_issue | 2 |
| container_start_page | 334 |
| container_title | Virology (New York, N.Y.) |
| container_volume | 386 |
| creator | Schumann, Thomas Hotzel, Helmut Otto, Peter Johne, Reimar |
| description | Abstract Avian rotaviruses are broadly distributed among birds, but only scarcely characterized on the molecular level. The VP4-, VP6-, VP7- and NSP5-encoding sequences of eight group A rotaviruses from chickens and turkeys determined here indicate a low degree of sequence similarity with mammalian rotaviruses. An NSP6-encoding region was missing in all chicken isolates except for isolate Ch2. Four novel genotypes (P[30], P[31], G22 and H8) were assigned by the Rotavirus Classification Working Group. Generally, chicken and turkey isolates clustered into separate branches of phylogenetic trees. However, chicken isolate Ch2 consistently clustered together with turkey isolates. Chicken isolate 06V0661G1 has a VP4-encoding sequence of unknown origin, but possesses VP6, VP7 and NSP5 genotypes typical for chicken isolates. These results might indicate interspecies transmission and reassortment among avian group A rotaviruses under field conditions. PCR protocols enabling amplification of avian and mammalian group A rotaviruses were developed for use in further epidemiological studies. |
| doi_str_mv | 10.1016/j.virol.2009.01.040 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_67090222</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>1_s2_0_S004268220900097X</els_id><sourcerecordid>20473017</sourcerecordid><originalsourceid>FETCH-LOGICAL-c533t-65ea9a214541c16c264cea8530b0363f4954427b795f34e2541da5aedb6cb2753</originalsourceid><addsrcrecordid>eNqFkk2LFDEQhoMo7rj6CwTNyVu3lY9OTx8UlmX9gAUP64q3kE5XDxl7kjHVPbD_3owzIHjZU0h4qlI8bzH2WkAtQJj32_oQcppqCdDVIGrQ8IStBHSmAqXFU7YC0LIyaykv2AuiLZR728JzdiE6qbs1NCv24-YQBoweeRp5iDNm2qMPSHzOLtIuEIUUuYsDz-iIUp53GGfudiluuDsEF_kmp2XPr3hOc3nICyG9ZM9GNxG-Op-X7P7TzffrL9Xtt89fr69uK98oNVemQdc5KXSjhRfGS6M9unWjoAdl1Ki7RmvZ9m3XjEqjLNjgGodDb3wv20Zdsnenvvucfi9Isy0Te5wmFzEtZE0LHUgpHwVlUaNAtAVUJ9DnRJRxtPscdi4_WAH26N1u7V_v9ujdgrDFe6l6c26_9Dsc_tWcRRfg7QkYXbJukwPZ-zsJovxpGmHWphAfTgQWX4eA2VLJoSQzhIx-tkMKj4zw8b96P4UYvJt-4QPSNi05liissCQt2Lvjchx3owgqXdqf6g8VmLNl</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>20473017</pqid></control><display><type>article</type><title>Evidence of interspecies transmission and reassortment among avian group A rotaviruses</title><source>MEDLINE</source><source>Access via ScienceDirect (Elsevier)</source><source>EZB-FREE-00999 freely available EZB journals</source><creator>Schumann, Thomas ; Hotzel, Helmut ; Otto, Peter ; Johne, Reimar</creator><creatorcontrib>Schumann, Thomas ; Hotzel, Helmut ; Otto, Peter ; Johne, Reimar</creatorcontrib><description>Abstract Avian rotaviruses are broadly distributed among birds, but only scarcely characterized on the molecular level. The VP4-, VP6-, VP7- and NSP5-encoding sequences of eight group A rotaviruses from chickens and turkeys determined here indicate a low degree of sequence similarity with mammalian rotaviruses. An NSP6-encoding region was missing in all chicken isolates except for isolate Ch2. Four novel genotypes (P[30], P[31], G22 and H8) were assigned by the Rotavirus Classification Working Group. Generally, chicken and turkey isolates clustered into separate branches of phylogenetic trees. However, chicken isolate Ch2 consistently clustered together with turkey isolates. Chicken isolate 06V0661G1 has a VP4-encoding sequence of unknown origin, but possesses VP6, VP7 and NSP5 genotypes typical for chicken isolates. These results might indicate interspecies transmission and reassortment among avian group A rotaviruses under field conditions. PCR protocols enabling amplification of avian and mammalian group A rotaviruses were developed for use in further epidemiological studies.</description><identifier>ISSN: 0042-6822</identifier><identifier>EISSN: 1096-0341</identifier><identifier>DOI: 10.1016/j.virol.2009.01.040</identifier><identifier>PMID: 19249805</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Amino Acid Sequence ; Animals ; Avian virus ; bird diseases ; Capsid Proteins - genetics ; chickens ; Chickens - virology ; consensus sequences ; conserved sequences ; disease transmission ; Epidemiology ; evolution ; Evolution, Molecular ; gene reassortment ; genetic variation ; Genome analysis ; Genome, Viral ; Genotype ; Infectious Disease ; Interspecies transmission ; Molecular Sequence Data ; Phylogeny ; reassortant viruses ; Reassortment ; RNA, Viral - genetics ; Rotavirus ; Rotavirus - classification ; Rotavirus - genetics ; Rotavirus - isolation & purification ; Rotavirus A ; Rotavirus Infections - transmission ; Rotavirus Infections - virology ; Sequence Alignment ; Sequence Analysis, RNA ; strain differences ; turkeys ; Turkeys - virology ; viral diseases of animals and humans</subject><ispartof>Virology (New York, N.Y.), 2009-04, Vol.386 (2), p.334-343</ispartof><rights>Elsevier Inc.</rights><rights>2008 Elsevier Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c533t-65ea9a214541c16c264cea8530b0363f4954427b795f34e2541da5aedb6cb2753</citedby><cites>FETCH-LOGICAL-c533t-65ea9a214541c16c264cea8530b0363f4954427b795f34e2541da5aedb6cb2753</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.virol.2009.01.040$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19249805$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Schumann, Thomas</creatorcontrib><creatorcontrib>Hotzel, Helmut</creatorcontrib><creatorcontrib>Otto, Peter</creatorcontrib><creatorcontrib>Johne, Reimar</creatorcontrib><title>Evidence of interspecies transmission and reassortment among avian group A rotaviruses</title><title>Virology (New York, N.Y.)</title><addtitle>Virology</addtitle><description>Abstract Avian rotaviruses are broadly distributed among birds, but only scarcely characterized on the molecular level. The VP4-, VP6-, VP7- and NSP5-encoding sequences of eight group A rotaviruses from chickens and turkeys determined here indicate a low degree of sequence similarity with mammalian rotaviruses. An NSP6-encoding region was missing in all chicken isolates except for isolate Ch2. Four novel genotypes (P[30], P[31], G22 and H8) were assigned by the Rotavirus Classification Working Group. Generally, chicken and turkey isolates clustered into separate branches of phylogenetic trees. However, chicken isolate Ch2 consistently clustered together with turkey isolates. Chicken isolate 06V0661G1 has a VP4-encoding sequence of unknown origin, but possesses VP6, VP7 and NSP5 genotypes typical for chicken isolates. These results might indicate interspecies transmission and reassortment among avian group A rotaviruses under field conditions. PCR protocols enabling amplification of avian and mammalian group A rotaviruses were developed for use in further epidemiological studies.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Avian virus</subject><subject>bird diseases</subject><subject>Capsid Proteins - genetics</subject><subject>chickens</subject><subject>Chickens - virology</subject><subject>consensus sequences</subject><subject>conserved sequences</subject><subject>disease transmission</subject><subject>Epidemiology</subject><subject>evolution</subject><subject>Evolution, Molecular</subject><subject>gene reassortment</subject><subject>genetic variation</subject><subject>Genome analysis</subject><subject>Genome, Viral</subject><subject>Genotype</subject><subject>Infectious Disease</subject><subject>Interspecies transmission</subject><subject>Molecular Sequence Data</subject><subject>Phylogeny</subject><subject>reassortant viruses</subject><subject>Reassortment</subject><subject>RNA, Viral - genetics</subject><subject>Rotavirus</subject><subject>Rotavirus - classification</subject><subject>Rotavirus - genetics</subject><subject>Rotavirus - isolation & purification</subject><subject>Rotavirus A</subject><subject>Rotavirus Infections - transmission</subject><subject>Rotavirus Infections - virology</subject><subject>Sequence Alignment</subject><subject>Sequence Analysis, RNA</subject><subject>strain differences</subject><subject>turkeys</subject><subject>Turkeys - virology</subject><subject>viral diseases of animals and humans</subject><issn>0042-6822</issn><issn>1096-0341</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkk2LFDEQhoMo7rj6CwTNyVu3lY9OTx8UlmX9gAUP64q3kE5XDxl7kjHVPbD_3owzIHjZU0h4qlI8bzH2WkAtQJj32_oQcppqCdDVIGrQ8IStBHSmAqXFU7YC0LIyaykv2AuiLZR728JzdiE6qbs1NCv24-YQBoweeRp5iDNm2qMPSHzOLtIuEIUUuYsDz-iIUp53GGfudiluuDsEF_kmp2XPr3hOc3nICyG9ZM9GNxG-Op-X7P7TzffrL9Xtt89fr69uK98oNVemQdc5KXSjhRfGS6M9unWjoAdl1Ki7RmvZ9m3XjEqjLNjgGodDb3wv20Zdsnenvvucfi9Isy0Te5wmFzEtZE0LHUgpHwVlUaNAtAVUJ9DnRJRxtPscdi4_WAH26N1u7V_v9ujdgrDFe6l6c26_9Dsc_tWcRRfg7QkYXbJukwPZ-zsJovxpGmHWphAfTgQWX4eA2VLJoSQzhIx-tkMKj4zw8b96P4UYvJt-4QPSNi05liissCQt2Lvjchx3owgqXdqf6g8VmLNl</recordid><startdate>20090410</startdate><enddate>20090410</enddate><creator>Schumann, Thomas</creator><creator>Hotzel, Helmut</creator><creator>Otto, Peter</creator><creator>Johne, Reimar</creator><general>Elsevier Inc</general><scope>6I.</scope><scope>AAFTH</scope><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7U9</scope><scope>H94</scope><scope>7X8</scope></search><sort><creationdate>20090410</creationdate><title>Evidence of interspecies transmission and reassortment among avian group A rotaviruses</title><author>Schumann, Thomas ; Hotzel, Helmut ; Otto, Peter ; Johne, Reimar</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c533t-65ea9a214541c16c264cea8530b0363f4954427b795f34e2541da5aedb6cb2753</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Avian virus</topic><topic>bird diseases</topic><topic>Capsid Proteins - genetics</topic><topic>chickens</topic><topic>Chickens - virology</topic><topic>consensus sequences</topic><topic>conserved sequences</topic><topic>disease transmission</topic><topic>Epidemiology</topic><topic>evolution</topic><topic>Evolution, Molecular</topic><topic>gene reassortment</topic><topic>genetic variation</topic><topic>Genome analysis</topic><topic>Genome, Viral</topic><topic>Genotype</topic><topic>Infectious Disease</topic><topic>Interspecies transmission</topic><topic>Molecular Sequence Data</topic><topic>Phylogeny</topic><topic>reassortant viruses</topic><topic>Reassortment</topic><topic>RNA, Viral - genetics</topic><topic>Rotavirus</topic><topic>Rotavirus - classification</topic><topic>Rotavirus - genetics</topic><topic>Rotavirus - isolation & purification</topic><topic>Rotavirus A</topic><topic>Rotavirus Infections - transmission</topic><topic>Rotavirus Infections - virology</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, RNA</topic><topic>strain differences</topic><topic>turkeys</topic><topic>Turkeys - virology</topic><topic>viral diseases of animals and humans</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Schumann, Thomas</creatorcontrib><creatorcontrib>Hotzel, Helmut</creatorcontrib><creatorcontrib>Otto, Peter</creatorcontrib><creatorcontrib>Johne, Reimar</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Virology and AIDS Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Virology (New York, N.Y.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Schumann, Thomas</au><au>Hotzel, Helmut</au><au>Otto, Peter</au><au>Johne, Reimar</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evidence of interspecies transmission and reassortment among avian group A rotaviruses</atitle><jtitle>Virology (New York, N.Y.)</jtitle><addtitle>Virology</addtitle><date>2009-04-10</date><risdate>2009</risdate><volume>386</volume><issue>2</issue><spage>334</spage><epage>343</epage><pages>334-343</pages><issn>0042-6822</issn><eissn>1096-0341</eissn><abstract>Abstract Avian rotaviruses are broadly distributed among birds, but only scarcely characterized on the molecular level. The VP4-, VP6-, VP7- and NSP5-encoding sequences of eight group A rotaviruses from chickens and turkeys determined here indicate a low degree of sequence similarity with mammalian rotaviruses. An NSP6-encoding region was missing in all chicken isolates except for isolate Ch2. Four novel genotypes (P[30], P[31], G22 and H8) were assigned by the Rotavirus Classification Working Group. Generally, chicken and turkey isolates clustered into separate branches of phylogenetic trees. However, chicken isolate Ch2 consistently clustered together with turkey isolates. Chicken isolate 06V0661G1 has a VP4-encoding sequence of unknown origin, but possesses VP6, VP7 and NSP5 genotypes typical for chicken isolates. These results might indicate interspecies transmission and reassortment among avian group A rotaviruses under field conditions. PCR protocols enabling amplification of avian and mammalian group A rotaviruses were developed for use in further epidemiological studies.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>19249805</pmid><doi>10.1016/j.virol.2009.01.040</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0042-6822 |
| ispartof | Virology (New York, N.Y.), 2009-04, Vol.386 (2), p.334-343 |
| issn | 0042-6822 1096-0341 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_67090222 |
| source | MEDLINE; Access via ScienceDirect (Elsevier); EZB-FREE-00999 freely available EZB journals |
| subjects | Amino Acid Sequence Animals Avian virus bird diseases Capsid Proteins - genetics chickens Chickens - virology consensus sequences conserved sequences disease transmission Epidemiology evolution Evolution, Molecular gene reassortment genetic variation Genome analysis Genome, Viral Genotype Infectious Disease Interspecies transmission Molecular Sequence Data Phylogeny reassortant viruses Reassortment RNA, Viral - genetics Rotavirus Rotavirus - classification Rotavirus - genetics Rotavirus - isolation & purification Rotavirus A Rotavirus Infections - transmission Rotavirus Infections - virology Sequence Alignment Sequence Analysis, RNA strain differences turkeys Turkeys - virology viral diseases of animals and humans |
| title | Evidence of interspecies transmission and reassortment among avian group A rotaviruses |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-24T03%3A23%3A35IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Evidence%20of%20interspecies%20transmission%20and%20reassortment%20among%20avian%20group%20A%20rotaviruses&rft.jtitle=Virology%20(New%20York,%20N.Y.)&rft.au=Schumann,%20Thomas&rft.date=2009-04-10&rft.volume=386&rft.issue=2&rft.spage=334&rft.epage=343&rft.pages=334-343&rft.issn=0042-6822&rft.eissn=1096-0341&rft_id=info:doi/10.1016/j.virol.2009.01.040&rft_dat=%3Cproquest_cross%3E20473017%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=20473017&rft_id=info:pmid/19249805&rft_els_id=1_s2_0_S004268220900097X&rfr_iscdi=true |