Kinetic Studies of AMP-Dependent Phosphorolysis of Amylopectin Catalyzed by Phosphorylase b on a 27 MHz Quartz-Crystal Microbalance
Catalytic cleavage reactions of phosphorylase b were monitored directly on an amylopectin-immobilized 27 MHz quartz-crystal microbalance (QCM). When the inactivated phosphorylase b was injected into a phosphate buffer solution of amylopectin-immobilized QCM (method A), the binding of the enzyme to a...
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Veröffentlicht in: | Journal of the American Chemical Society 2004-11, Vol.126 (45), p.14752-14757 |
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creator | Nishino, Hidekazu Murakawa, Akiko Mori, Toshiaki Okahata, Yoshio |
description | Catalytic cleavage reactions of phosphorylase b were monitored directly on an amylopectin-immobilized 27 MHz quartz-crystal microbalance (QCM). When the inactivated phosphorylase b was injected into a phosphate buffer solution of amylopectin-immobilized QCM (method A), the binding of the enzyme to amylopectin was observed as a frequency decrease (mass increase). Then, when AMP (adenosine monophosphate) was added to activate the enzyme, the frequency gradually increased (mass decreased) due to the phosphorolysis of amylopectin in the presence of phosphates as buffers. When the AMP-activated phosphorylase b was employed (method B), the continuous reaction was observed which includes both the mass increase due to the enzyme binding to amylopectin at first and then the following mass decrease due to the phosphorolysis by the AMP-activated enzyme. All kinetic parameters for the enzyme binding to the substrate (binding and dissociation rate constants, k on and k off, and dissociation constant, K d), the AMP binding to the enzyme as activator (K AMP), the catalytic rate constant (k cat) were obtained from curve fittings of time-courses of frequency (mass) changes. The obtained kinetic parameters were compared with those from Michaelis−Menten kinetics. |
doi_str_mv | 10.1021/ja046583k |
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When the inactivated phosphorylase b was injected into a phosphate buffer solution of amylopectin-immobilized QCM (method A), the binding of the enzyme to amylopectin was observed as a frequency decrease (mass increase). Then, when AMP (adenosine monophosphate) was added to activate the enzyme, the frequency gradually increased (mass decreased) due to the phosphorolysis of amylopectin in the presence of phosphates as buffers. When the AMP-activated phosphorylase b was employed (method B), the continuous reaction was observed which includes both the mass increase due to the enzyme binding to amylopectin at first and then the following mass decrease due to the phosphorolysis by the AMP-activated enzyme. All kinetic parameters for the enzyme binding to the substrate (binding and dissociation rate constants, k on and k off, and dissociation constant, K d), the AMP binding to the enzyme as activator (K AMP), the catalytic rate constant (k cat) were obtained from curve fittings of time-courses of frequency (mass) changes. The obtained kinetic parameters were compared with those from Michaelis−Menten kinetics.</description><identifier>ISSN: 0002-7863</identifier><identifier>EISSN: 1520-5126</identifier><identifier>DOI: 10.1021/ja046583k</identifier><identifier>PMID: 15535699</identifier><identifier>CODEN: JACSAT</identifier><language>eng</language><publisher>Washington, DC: American Chemical Society</publisher><subject>Adenosine Monophosphate - chemistry ; Adenosine Monophosphate - metabolism ; Amylopectin - chemistry ; Amylopectin - metabolism ; Biological and medical sciences ; Carbohydrate Sequence ; Catalysis ; Fundamental and applied biological sciences. Psychology ; Kinetics ; Mechanisms. Catalysis. Electron transfer. Models ; Microchemistry - methods ; Molecular biophysics ; Molecular Sequence Data ; Phosphorylase b - chemistry ; Phosphorylase b - metabolism ; Phosphorylation ; Physical chemistry in biology</subject><ispartof>Journal of the American Chemical Society, 2004-11, Vol.126 (45), p.14752-14757</ispartof><rights>Copyright © 2004 American Chemical Society</rights><rights>2005 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a489t-71b93264461ccca848fbe736ed36812e9ba6d595ae1e0bc676c24991faadcabf3</citedby><cites>FETCH-LOGICAL-a489t-71b93264461ccca848fbe736ed36812e9ba6d595ae1e0bc676c24991faadcabf3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/ja046583k$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/ja046583k$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,780,784,2765,27076,27924,27925,56738,56788</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=16281445$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15535699$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nishino, Hidekazu</creatorcontrib><creatorcontrib>Murakawa, Akiko</creatorcontrib><creatorcontrib>Mori, Toshiaki</creatorcontrib><creatorcontrib>Okahata, Yoshio</creatorcontrib><title>Kinetic Studies of AMP-Dependent Phosphorolysis of Amylopectin Catalyzed by Phosphorylase b on a 27 MHz Quartz-Crystal Microbalance</title><title>Journal of the American Chemical Society</title><addtitle>J. Am. Chem. Soc</addtitle><description>Catalytic cleavage reactions of phosphorylase b were monitored directly on an amylopectin-immobilized 27 MHz quartz-crystal microbalance (QCM). When the inactivated phosphorylase b was injected into a phosphate buffer solution of amylopectin-immobilized QCM (method A), the binding of the enzyme to amylopectin was observed as a frequency decrease (mass increase). Then, when AMP (adenosine monophosphate) was added to activate the enzyme, the frequency gradually increased (mass decreased) due to the phosphorolysis of amylopectin in the presence of phosphates as buffers. When the AMP-activated phosphorylase b was employed (method B), the continuous reaction was observed which includes both the mass increase due to the enzyme binding to amylopectin at first and then the following mass decrease due to the phosphorolysis by the AMP-activated enzyme. All kinetic parameters for the enzyme binding to the substrate (binding and dissociation rate constants, k on and k off, and dissociation constant, K d), the AMP binding to the enzyme as activator (K AMP), the catalytic rate constant (k cat) were obtained from curve fittings of time-courses of frequency (mass) changes. The obtained kinetic parameters were compared with those from Michaelis−Menten kinetics.</description><subject>Adenosine Monophosphate - chemistry</subject><subject>Adenosine Monophosphate - metabolism</subject><subject>Amylopectin - chemistry</subject><subject>Amylopectin - metabolism</subject><subject>Biological and medical sciences</subject><subject>Carbohydrate Sequence</subject><subject>Catalysis</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Kinetics</subject><subject>Mechanisms. Catalysis. Electron transfer. Models</subject><subject>Microchemistry - methods</subject><subject>Molecular biophysics</subject><subject>Molecular Sequence Data</subject><subject>Phosphorylase b - chemistry</subject><subject>Phosphorylase b - metabolism</subject><subject>Phosphorylation</subject><subject>Physical chemistry in biology</subject><issn>0002-7863</issn><issn>1520-5126</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2004</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNptkUFv0zAYhi3ExErhwB9AvoC0Q4adxHZynMrGEKsoWkHcrC_OF81dGmd2Ii298scxatVeOFnW9_jV-z0m5B1nl5yl_NMGWC5FkT2-IDMuUpYInsqXZMYYSxNVyOycvA5hE695WvBX5JwLkQlZljPy55vtcLCG3g9jbTFQ19Cr5Sr5jD12NXYDXT240D8479op2P18O7WuRzPYji5ggHbaYU2r6YhOLQSkFXUdBZoqurzd0R8j-GGXLPwU4gu6tMa7ClroDL4hZw20Ad8ezjn5eXO9Xtwmd9-_fF1c3SWQF-WQKF6VWSrzXHJjDBR50VSoMol1JgueYlmBrEUpADmyykglTZqXJW8AagNVk83Jx31u793TiGHQWxsMtrEEujFoqZhUPHqck4s9GDuG4LHRvbdb8JPmTP8zro_GI_v-EDpWW6xP5EFxBD4cAAgG2sbHlW04cTJ-SZ6LyCV7zoYBn49z8I-xWKaEXq_u9e-1YIXKfunVKRdM0Bs3-i66-0_Bv14jpQ8</recordid><startdate>20041117</startdate><enddate>20041117</enddate><creator>Nishino, Hidekazu</creator><creator>Murakawa, Akiko</creator><creator>Mori, Toshiaki</creator><creator>Okahata, Yoshio</creator><general>American Chemical Society</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20041117</creationdate><title>Kinetic Studies of AMP-Dependent Phosphorolysis of Amylopectin Catalyzed by Phosphorylase b on a 27 MHz Quartz-Crystal Microbalance</title><author>Nishino, Hidekazu ; Murakawa, Akiko ; Mori, Toshiaki ; Okahata, Yoshio</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a489t-71b93264461ccca848fbe736ed36812e9ba6d595ae1e0bc676c24991faadcabf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2004</creationdate><topic>Adenosine Monophosphate - chemistry</topic><topic>Adenosine Monophosphate - metabolism</topic><topic>Amylopectin - chemistry</topic><topic>Amylopectin - metabolism</topic><topic>Biological and medical sciences</topic><topic>Carbohydrate Sequence</topic><topic>Catalysis</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Kinetics</topic><topic>Mechanisms. Catalysis. Electron transfer. Models</topic><topic>Microchemistry - methods</topic><topic>Molecular biophysics</topic><topic>Molecular Sequence Data</topic><topic>Phosphorylase b - chemistry</topic><topic>Phosphorylase b - metabolism</topic><topic>Phosphorylation</topic><topic>Physical chemistry in biology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nishino, Hidekazu</creatorcontrib><creatorcontrib>Murakawa, Akiko</creatorcontrib><creatorcontrib>Mori, Toshiaki</creatorcontrib><creatorcontrib>Okahata, Yoshio</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of the American Chemical Society</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nishino, Hidekazu</au><au>Murakawa, Akiko</au><au>Mori, Toshiaki</au><au>Okahata, Yoshio</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Kinetic Studies of AMP-Dependent Phosphorolysis of Amylopectin Catalyzed by Phosphorylase b on a 27 MHz Quartz-Crystal Microbalance</atitle><jtitle>Journal of the American Chemical Society</jtitle><addtitle>J. Am. Chem. Soc</addtitle><date>2004-11-17</date><risdate>2004</risdate><volume>126</volume><issue>45</issue><spage>14752</spage><epage>14757</epage><pages>14752-14757</pages><issn>0002-7863</issn><eissn>1520-5126</eissn><coden>JACSAT</coden><abstract>Catalytic cleavage reactions of phosphorylase b were monitored directly on an amylopectin-immobilized 27 MHz quartz-crystal microbalance (QCM). When the inactivated phosphorylase b was injected into a phosphate buffer solution of amylopectin-immobilized QCM (method A), the binding of the enzyme to amylopectin was observed as a frequency decrease (mass increase). Then, when AMP (adenosine monophosphate) was added to activate the enzyme, the frequency gradually increased (mass decreased) due to the phosphorolysis of amylopectin in the presence of phosphates as buffers. When the AMP-activated phosphorylase b was employed (method B), the continuous reaction was observed which includes both the mass increase due to the enzyme binding to amylopectin at first and then the following mass decrease due to the phosphorolysis by the AMP-activated enzyme. All kinetic parameters for the enzyme binding to the substrate (binding and dissociation rate constants, k on and k off, and dissociation constant, K d), the AMP binding to the enzyme as activator (K AMP), the catalytic rate constant (k cat) were obtained from curve fittings of time-courses of frequency (mass) changes. The obtained kinetic parameters were compared with those from Michaelis−Menten kinetics.</abstract><cop>Washington, DC</cop><pub>American Chemical Society</pub><pmid>15535699</pmid><doi>10.1021/ja046583k</doi><tpages>6</tpages></addata></record> |
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subjects | Adenosine Monophosphate - chemistry Adenosine Monophosphate - metabolism Amylopectin - chemistry Amylopectin - metabolism Biological and medical sciences Carbohydrate Sequence Catalysis Fundamental and applied biological sciences. Psychology Kinetics Mechanisms. Catalysis. Electron transfer. Models Microchemistry - methods Molecular biophysics Molecular Sequence Data Phosphorylase b - chemistry Phosphorylase b - metabolism Phosphorylation Physical chemistry in biology |
title | Kinetic Studies of AMP-Dependent Phosphorolysis of Amylopectin Catalyzed by Phosphorylase b on a 27 MHz Quartz-Crystal Microbalance |
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