Root nodule bacteria isolated from South African Lotononis bainesii, L. listii and L. solitudinis are species of Methylobacterium that are unable to utilize methanol
The South African legumes Lotononis bainesii, L. listii and L. solitudinis are specifically nodulated by highly effective, pink-pigmented bacteria that are most closely related to Methylobacterium nodulans on the basis of 16S rRNA gene homology. Methylobacterium spp. are characterized by their abili...
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| Veröffentlicht in: | Archives of microbiology 2009-04, Vol.191 (4), p.311-318 |
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| creator | Ardley, Julie Kaye O'Hara, Graham W Reeve, Wayne G Yates, Ron J Dilworth, Michael J Tiwari, Ravi P Howieson, John G |
| description | The South African legumes Lotononis bainesii, L. listii and L. solitudinis are specifically nodulated by highly effective, pink-pigmented bacteria that are most closely related to Methylobacterium nodulans on the basis of 16S rRNA gene homology. Methylobacterium spp. are characterized by their ability to utilize methanol and other C₁ compounds, but 11 Lotononis isolates neither grew on methanol as a sole carbon source nor were able to metabolize it. No product was obtained for PCR amplification of mxaF, the gene encoding the large subunit of methanol dehydrogenase. Searches for methylotrophy genes in the sequenced genome of Methylobacterium sp. 4-46, isolated from L. bainesii, indicate that the inability to utilize methanol may be due to the absence of the mxa operon. While methylotrophy appears to contribute to the effectiveness of the Crotalaria/M. nodulans symbiosis, our results indicate that the ability to utilize methanol is not a factor in the Lotononis/Methylobacterium symbiosis. |
| doi_str_mv | 10.1007/s00203-009-0456-0 |
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Methylobacterium spp. are characterized by their ability to utilize methanol and other C₁ compounds, but 11 Lotononis isolates neither grew on methanol as a sole carbon source nor were able to metabolize it. No product was obtained for PCR amplification of mxaF, the gene encoding the large subunit of methanol dehydrogenase. Searches for methylotrophy genes in the sequenced genome of Methylobacterium sp. 4-46, isolated from L. bainesii, indicate that the inability to utilize methanol may be due to the absence of the mxa operon. While methylotrophy appears to contribute to the effectiveness of the Crotalaria/M. nodulans symbiosis, our results indicate that the ability to utilize methanol is not a factor in the Lotononis/Methylobacterium symbiosis.</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-009-0456-0</identifier><identifier>PMID: 19152052</identifier><identifier>CODEN: AMICCW</identifier><language>eng</language><publisher>Berlin/Heidelberg: Berlin/Heidelberg : Springer-Verlag</publisher><subject>Alcohol Oxidoreductases - genetics ; Bacteria ; Bacteriology ; Biochemistry ; Biological and medical sciences ; Biomedical and Life Sciences ; Biotechnology ; Carbon ; Carbon sources ; Cell Biology ; Culture Media ; Dehydrogenases ; Ecology ; Fabaceae - microbiology ; Fundamental and applied biological sciences. Psychology ; Genes ; Genes, Bacterial ; Genes, rRNA ; Genome, Bacterial ; Genomes ; Legumes ; Life Sciences ; Methanol ; Methanol - metabolism ; Methylobacterium - genetics ; Methylobacterium - growth & development ; Methylobacterium - isolation & purification ; Methylobacterium - metabolism ; Microbial Ecology ; Microbiology ; Miscellaneous ; Original Paper ; Oxidation ; RNA, Bacterial - genetics ; RNA, Ribosomal, 16S - genetics ; Root Nodules, Plant - microbiology ; Sequence Analysis, DNA ; South Africa ; Species Specificity ; Symbiosis</subject><ispartof>Archives of microbiology, 2009-04, Vol.191 (4), p.311-318</ispartof><rights>Springer-Verlag 2009</rights><rights>2009 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c466t-96ce7152e2b94447ef1788996986c9b26fce3f80489d2f35629850c6137917213</citedby><cites>FETCH-LOGICAL-c466t-96ce7152e2b94447ef1788996986c9b26fce3f80489d2f35629850c6137917213</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00203-009-0456-0$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00203-009-0456-0$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=21270069$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19152052$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ardley, Julie Kaye</creatorcontrib><creatorcontrib>O'Hara, Graham W</creatorcontrib><creatorcontrib>Reeve, Wayne G</creatorcontrib><creatorcontrib>Yates, Ron J</creatorcontrib><creatorcontrib>Dilworth, Michael J</creatorcontrib><creatorcontrib>Tiwari, Ravi P</creatorcontrib><creatorcontrib>Howieson, John G</creatorcontrib><title>Root nodule bacteria isolated from South African Lotononis bainesii, L. listii and L. solitudinis are species of Methylobacterium that are unable to utilize methanol</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><addtitle>Arch Microbiol</addtitle><description>The South African legumes Lotononis bainesii, L. listii and L. solitudinis are specifically nodulated by highly effective, pink-pigmented bacteria that are most closely related to Methylobacterium nodulans on the basis of 16S rRNA gene homology. Methylobacterium spp. are characterized by their ability to utilize methanol and other C₁ compounds, but 11 Lotononis isolates neither grew on methanol as a sole carbon source nor were able to metabolize it. No product was obtained for PCR amplification of mxaF, the gene encoding the large subunit of methanol dehydrogenase. Searches for methylotrophy genes in the sequenced genome of Methylobacterium sp. 4-46, isolated from L. bainesii, indicate that the inability to utilize methanol may be due to the absence of the mxa operon. While methylotrophy appears to contribute to the effectiveness of the Crotalaria/M. nodulans symbiosis, our results indicate that the ability to utilize methanol is not a factor in the Lotononis/Methylobacterium symbiosis.</description><subject>Alcohol Oxidoreductases - genetics</subject><subject>Bacteria</subject><subject>Bacteriology</subject><subject>Biochemistry</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Carbon</subject><subject>Carbon sources</subject><subject>Cell Biology</subject><subject>Culture Media</subject><subject>Dehydrogenases</subject><subject>Ecology</subject><subject>Fabaceae - microbiology</subject><subject>Fundamental and applied biological sciences. 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Psychology</topic><topic>Genes</topic><topic>Genes, Bacterial</topic><topic>Genes, rRNA</topic><topic>Genome, Bacterial</topic><topic>Genomes</topic><topic>Legumes</topic><topic>Life Sciences</topic><topic>Methanol</topic><topic>Methanol - metabolism</topic><topic>Methylobacterium - genetics</topic><topic>Methylobacterium - growth & development</topic><topic>Methylobacterium - isolation & purification</topic><topic>Methylobacterium - metabolism</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Original Paper</topic><topic>Oxidation</topic><topic>RNA, Bacterial - genetics</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Root Nodules, Plant - microbiology</topic><topic>Sequence Analysis, DNA</topic><topic>South Africa</topic><topic>Species Specificity</topic><topic>Symbiosis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ardley, Julie Kaye</creatorcontrib><creatorcontrib>O'Hara, Graham W</creatorcontrib><creatorcontrib>Reeve, Wayne G</creatorcontrib><creatorcontrib>Yates, Ron J</creatorcontrib><creatorcontrib>Dilworth, Michael J</creatorcontrib><creatorcontrib>Tiwari, Ravi P</creatorcontrib><creatorcontrib>Howieson, John G</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ardley, Julie Kaye</au><au>O'Hara, Graham W</au><au>Reeve, Wayne G</au><au>Yates, Ron J</au><au>Dilworth, Michael J</au><au>Tiwari, Ravi P</au><au>Howieson, John G</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Root nodule bacteria isolated from South African Lotononis bainesii, L. listii and L. solitudinis are species of Methylobacterium that are unable to utilize methanol</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><addtitle>Arch Microbiol</addtitle><date>2009-04-01</date><risdate>2009</risdate><volume>191</volume><issue>4</issue><spage>311</spage><epage>318</epage><pages>311-318</pages><issn>0302-8933</issn><eissn>1432-072X</eissn><coden>AMICCW</coden><abstract>The South African legumes Lotononis bainesii, L. listii and L. solitudinis are specifically nodulated by highly effective, pink-pigmented bacteria that are most closely related to Methylobacterium nodulans on the basis of 16S rRNA gene homology. Methylobacterium spp. are characterized by their ability to utilize methanol and other C₁ compounds, but 11 Lotononis isolates neither grew on methanol as a sole carbon source nor were able to metabolize it. No product was obtained for PCR amplification of mxaF, the gene encoding the large subunit of methanol dehydrogenase. Searches for methylotrophy genes in the sequenced genome of Methylobacterium sp. 4-46, isolated from L. bainesii, indicate that the inability to utilize methanol may be due to the absence of the mxa operon. While methylotrophy appears to contribute to the effectiveness of the Crotalaria/M. nodulans symbiosis, our results indicate that the ability to utilize methanol is not a factor in the Lotononis/Methylobacterium symbiosis.</abstract><cop>Berlin/Heidelberg</cop><pub>Berlin/Heidelberg : Springer-Verlag</pub><pmid>19152052</pmid><doi>10.1007/s00203-009-0456-0</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | Archives of microbiology, 2009-04, Vol.191 (4), p.311-318 |
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| subjects | Alcohol Oxidoreductases - genetics Bacteria Bacteriology Biochemistry Biological and medical sciences Biomedical and Life Sciences Biotechnology Carbon Carbon sources Cell Biology Culture Media Dehydrogenases Ecology Fabaceae - microbiology Fundamental and applied biological sciences. Psychology Genes Genes, Bacterial Genes, rRNA Genome, Bacterial Genomes Legumes Life Sciences Methanol Methanol - metabolism Methylobacterium - genetics Methylobacterium - growth & development Methylobacterium - isolation & purification Methylobacterium - metabolism Microbial Ecology Microbiology Miscellaneous Original Paper Oxidation RNA, Bacterial - genetics RNA, Ribosomal, 16S - genetics Root Nodules, Plant - microbiology Sequence Analysis, DNA South Africa Species Specificity Symbiosis |
| title | Root nodule bacteria isolated from South African Lotononis bainesii, L. listii and L. solitudinis are species of Methylobacterium that are unable to utilize methanol |
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