Halomonas ilicicola sp. nov., a moderately halophilic bacterium isolated from a saltern
1 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Alcalá, 28871 Alcalá de Henares, Madrid, Spain 2 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, 41012 Sevilla, Spain Correspondence Juan Soliveri juan.soliveri{at}uah.e...
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creator | Arenas, Maria Banon, Patricia I Copa-Patino, Jose L Sanchez-Porro, Cristina Ventosa, Antonio Soliveri, Juan |
description | 1 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Alcalá, 28871 Alcalá de Henares, Madrid, Spain
2 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, 41012 Sevilla, Spain
Correspondence Juan Soliveri juan.soliveri{at}uah.es
A Gram-negative, heterotrophic, aerobic, pale orange-pigmented, non-endospore-forming and motile bacterial strain, designated strain SP8 T , was isolated from a salty water sample from the solar salterns of Santa Pola, located on the Mediterranean coast of Spain. The strain grew optimally at 37 °C, pH 6.5 and in the presence of 10 % NaCl. A polyphasic taxonomic study was conducted in order to characterize the strain in detail. Phylogenetic analyses based on 16S rRNA gene sequence comparisons indicated that strain SP8 T clustered within the branch constituted by species of the genus Halomonas . The closest phylogenetic neighbours of strain SP8 T were Halomonas muralis LMG 20969 T (96.0 % sequence similarity), Halomonas pantelleriensis AAP T (95.9 %) and Halomonas campaniensis 5AG T (95.8 %). Phenotypic features, the fatty acid profile and the DNA G+C content of the novel strain further supported its placement in the genus Halomonas . On the basis of phenotypic, chemotaxonomic and phylogenetic distinctiveness, it is suggested that strain SP8 T represents a novel species for which the name Halomonas ilicicola sp. nov. is proposed. The type strain is SP8 T (=CECT 7331 T =CCM 7522 T =DSM 19980 T ).
Abbreviations: SEM, scanning electron microscopy
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain SP8 T is EU218533 .
Additional phylogenetic trees based on neighbour-joining and maximum-likelihood analysis of the 16S rRNA gene sequences of strain SP8 T and closely related species are available with the online version of this paper. |
doi_str_mv | 10.1099/ijs.0.003509-0 |
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2 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, 41012 Sevilla, Spain
Correspondence Juan Soliveri juan.soliveri{at}uah.es
A Gram-negative, heterotrophic, aerobic, pale orange-pigmented, non-endospore-forming and motile bacterial strain, designated strain SP8 T , was isolated from a salty water sample from the solar salterns of Santa Pola, located on the Mediterranean coast of Spain. The strain grew optimally at 37 °C, pH 6.5 and in the presence of 10 % NaCl. A polyphasic taxonomic study was conducted in order to characterize the strain in detail. Phylogenetic analyses based on 16S rRNA gene sequence comparisons indicated that strain SP8 T clustered within the branch constituted by species of the genus Halomonas . The closest phylogenetic neighbours of strain SP8 T were Halomonas muralis LMG 20969 T (96.0 % sequence similarity), Halomonas pantelleriensis AAP T (95.9 %) and Halomonas campaniensis 5AG T (95.8 %). Phenotypic features, the fatty acid profile and the DNA G+C content of the novel strain further supported its placement in the genus Halomonas . On the basis of phenotypic, chemotaxonomic and phylogenetic distinctiveness, it is suggested that strain SP8 T represents a novel species for which the name Halomonas ilicicola sp. nov. is proposed. The type strain is SP8 T (=CECT 7331 T =CCM 7522 T =DSM 19980 T ).
Abbreviations: SEM, scanning electron microscopy
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain SP8 T is EU218533 .
Additional phylogenetic trees based on neighbour-joining and maximum-likelihood analysis of the 16S rRNA gene sequences of strain SP8 T and closely related species are available with the online version of this paper.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.003509-0</identifier><identifier>PMID: 19244445</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Bacteria ; Bacterial Typing Techniques ; Bacteriology ; Base Composition ; Biological and medical sciences ; DNA, Bacterial - analysis ; DNA, Ribosomal - analysis ; Fatty Acids - analysis ; Fresh Water - chemistry ; Fresh Water - microbiology ; Fundamental and applied biological sciences. Psychology ; Genes, rRNA ; Geologic Sediments - chemistry ; Geologic Sediments - microbiology ; Halomonas ; Halomonas - classification ; Halomonas - genetics ; Halomonas - isolation & purification ; Halomonas - physiology ; Halomonas muralis ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Phenotype ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Sodium Chloride ; Spain ; Species Specificity ; Sunlight ; Systematics</subject><ispartof>International journal of systematic and evolutionary microbiology, 2009-03, Vol.59 (3), p.578-582</ispartof><rights>2009 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c426t-ec448fa60a7d87f46e5bd1ddd2812077e9b85c9e82f5cbb5eaf86e22e0b1e9023</citedby><cites>FETCH-LOGICAL-c426t-ec448fa60a7d87f46e5bd1ddd2812077e9b85c9e82f5cbb5eaf86e22e0b1e9023</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,3733,3734,27905,27906</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=21262446$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19244445$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Arenas, Maria</creatorcontrib><creatorcontrib>Banon, Patricia I</creatorcontrib><creatorcontrib>Copa-Patino, Jose L</creatorcontrib><creatorcontrib>Sanchez-Porro, Cristina</creatorcontrib><creatorcontrib>Ventosa, Antonio</creatorcontrib><creatorcontrib>Soliveri, Juan</creatorcontrib><title>Halomonas ilicicola sp. nov., a moderately halophilic bacterium isolated from a saltern</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>1 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Alcalá, 28871 Alcalá de Henares, Madrid, Spain
2 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, 41012 Sevilla, Spain
Correspondence Juan Soliveri juan.soliveri{at}uah.es
A Gram-negative, heterotrophic, aerobic, pale orange-pigmented, non-endospore-forming and motile bacterial strain, designated strain SP8 T , was isolated from a salty water sample from the solar salterns of Santa Pola, located on the Mediterranean coast of Spain. The strain grew optimally at 37 °C, pH 6.5 and in the presence of 10 % NaCl. A polyphasic taxonomic study was conducted in order to characterize the strain in detail. Phylogenetic analyses based on 16S rRNA gene sequence comparisons indicated that strain SP8 T clustered within the branch constituted by species of the genus Halomonas . The closest phylogenetic neighbours of strain SP8 T were Halomonas muralis LMG 20969 T (96.0 % sequence similarity), Halomonas pantelleriensis AAP T (95.9 %) and Halomonas campaniensis 5AG T (95.8 %). Phenotypic features, the fatty acid profile and the DNA G+C content of the novel strain further supported its placement in the genus Halomonas . On the basis of phenotypic, chemotaxonomic and phylogenetic distinctiveness, it is suggested that strain SP8 T represents a novel species for which the name Halomonas ilicicola sp. nov. is proposed. The type strain is SP8 T (=CECT 7331 T =CCM 7522 T =DSM 19980 T ).
Abbreviations: SEM, scanning electron microscopy
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain SP8 T is EU218533 .
Additional phylogenetic trees based on neighbour-joining and maximum-likelihood analysis of the 16S rRNA gene sequences of strain SP8 T and closely related species are available with the online version of this paper.</description><subject>Bacteria</subject><subject>Bacterial Typing Techniques</subject><subject>Bacteriology</subject><subject>Base Composition</subject><subject>Biological and medical sciences</subject><subject>DNA, Bacterial - analysis</subject><subject>DNA, Ribosomal - analysis</subject><subject>Fatty Acids - analysis</subject><subject>Fresh Water - chemistry</subject><subject>Fresh Water - microbiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genes, rRNA</subject><subject>Geologic Sediments - chemistry</subject><subject>Geologic Sediments - microbiology</subject><subject>Halomonas</subject><subject>Halomonas - classification</subject><subject>Halomonas - genetics</subject><subject>Halomonas - isolation & purification</subject><subject>Halomonas - physiology</subject><subject>Halomonas muralis</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Sodium Chloride</subject><subject>Spain</subject><subject>Species Specificity</subject><subject>Sunlight</subject><subject>Systematics</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0EFv2yAUB3A0dVrSbtceKy5dL7P3wAabYxW1y6RKvWzaEWH83BBhk4Kzqd--RIna47iA4PfeQ39CLhmUDJT67raphBKgEqAK-ECWrJayEFDVZ29nLhfkPKUtQL4A-EQWTPE6L7Ekf9bGhzFMJlHnnXU2eEPTrqRT-Ft-o4aOocdoZvQvdJPpbnNgtDN2xuj2I3UpV8zY0yGGMftkfH6ZPpOPg_EJv5z2C_L7_u7Xal08PP74ubp9KGzN5Vygret2MBJM07fNUEsUXc_6vuct49A0qLpWWIUtH4TtOoFmaCVyjtAxVMCrC_L12HcXw_Me06xHlyx6byYM-6SlVLJR1f8hh5oxqSDD8ghtDClFHPQuutHEF81AHzLXOXMN-pi5PhRcnTrvuxH7d34KOYPrEzDJGj9EM1mX3hxnXGYps7s5uo172vxzEfUTTqPL_-hcOEwVSldaNG31CnSVmGA</recordid><startdate>20090301</startdate><enddate>20090301</enddate><creator>Arenas, Maria</creator><creator>Banon, Patricia I</creator><creator>Copa-Patino, Jose L</creator><creator>Sanchez-Porro, Cristina</creator><creator>Ventosa, Antonio</creator><creator>Soliveri, Juan</creator><general>Soc General Microbiol</general><general>Society for General Microbiology</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20090301</creationdate><title>Halomonas ilicicola sp. nov., a moderately halophilic bacterium isolated from a saltern</title><author>Arenas, Maria ; Banon, Patricia I ; Copa-Patino, Jose L ; Sanchez-Porro, Cristina ; Ventosa, Antonio ; Soliveri, Juan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c426t-ec448fa60a7d87f46e5bd1ddd2812077e9b85c9e82f5cbb5eaf86e22e0b1e9023</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Bacteria</topic><topic>Bacterial Typing Techniques</topic><topic>Bacteriology</topic><topic>Base Composition</topic><topic>Biological and medical sciences</topic><topic>DNA, Bacterial - analysis</topic><topic>DNA, Ribosomal - analysis</topic><topic>Fatty Acids - analysis</topic><topic>Fresh Water - chemistry</topic><topic>Fresh Water - microbiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Genes, rRNA</topic><topic>Geologic Sediments - chemistry</topic><topic>Geologic Sediments - microbiology</topic><topic>Halomonas</topic><topic>Halomonas - classification</topic><topic>Halomonas - genetics</topic><topic>Halomonas - isolation & purification</topic><topic>Halomonas - physiology</topic><topic>Halomonas muralis</topic><topic>Microbiology</topic><topic>Miscellaneous</topic><topic>Molecular Sequence Data</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Sodium Chloride</topic><topic>Spain</topic><topic>Species Specificity</topic><topic>Sunlight</topic><topic>Systematics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Arenas, Maria</creatorcontrib><creatorcontrib>Banon, Patricia I</creatorcontrib><creatorcontrib>Copa-Patino, Jose L</creatorcontrib><creatorcontrib>Sanchez-Porro, Cristina</creatorcontrib><creatorcontrib>Ventosa, Antonio</creatorcontrib><creatorcontrib>Soliveri, Juan</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Arenas, Maria</au><au>Banon, Patricia I</au><au>Copa-Patino, Jose L</au><au>Sanchez-Porro, Cristina</au><au>Ventosa, Antonio</au><au>Soliveri, Juan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Halomonas ilicicola sp. nov., a moderately halophilic bacterium isolated from a saltern</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2009-03-01</date><risdate>2009</risdate><volume>59</volume><issue>3</issue><spage>578</spage><epage>582</epage><pages>578-582</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>1 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Alcalá, 28871 Alcalá de Henares, Madrid, Spain
2 Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Sevilla, 41012 Sevilla, Spain
Correspondence Juan Soliveri juan.soliveri{at}uah.es
A Gram-negative, heterotrophic, aerobic, pale orange-pigmented, non-endospore-forming and motile bacterial strain, designated strain SP8 T , was isolated from a salty water sample from the solar salterns of Santa Pola, located on the Mediterranean coast of Spain. The strain grew optimally at 37 °C, pH 6.5 and in the presence of 10 % NaCl. A polyphasic taxonomic study was conducted in order to characterize the strain in detail. Phylogenetic analyses based on 16S rRNA gene sequence comparisons indicated that strain SP8 T clustered within the branch constituted by species of the genus Halomonas . The closest phylogenetic neighbours of strain SP8 T were Halomonas muralis LMG 20969 T (96.0 % sequence similarity), Halomonas pantelleriensis AAP T (95.9 %) and Halomonas campaniensis 5AG T (95.8 %). Phenotypic features, the fatty acid profile and the DNA G+C content of the novel strain further supported its placement in the genus Halomonas . On the basis of phenotypic, chemotaxonomic and phylogenetic distinctiveness, it is suggested that strain SP8 T represents a novel species for which the name Halomonas ilicicola sp. nov. is proposed. The type strain is SP8 T (=CECT 7331 T =CCM 7522 T =DSM 19980 T ).
Abbreviations: SEM, scanning electron microscopy
The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain SP8 T is EU218533 .
Additional phylogenetic trees based on neighbour-joining and maximum-likelihood analysis of the 16S rRNA gene sequences of strain SP8 T and closely related species are available with the online version of this paper.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>19244445</pmid><doi>10.1099/ijs.0.003509-0</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bacteria Bacterial Typing Techniques Bacteriology Base Composition Biological and medical sciences DNA, Bacterial - analysis DNA, Ribosomal - analysis Fatty Acids - analysis Fresh Water - chemistry Fresh Water - microbiology Fundamental and applied biological sciences. Psychology Genes, rRNA Geologic Sediments - chemistry Geologic Sediments - microbiology Halomonas Halomonas - classification Halomonas - genetics Halomonas - isolation & purification Halomonas - physiology Halomonas muralis Microbiology Miscellaneous Molecular Sequence Data Phenotype Phylogeny RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Sodium Chloride Spain Species Specificity Sunlight Systematics |
title | Halomonas ilicicola sp. nov., a moderately halophilic bacterium isolated from a saltern |
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