Rubellimicrobium aerolatum sp. nov., isolated from an air sample in Korea

1 Applied Microbiology Division, National Institute of Agricultural Science and Technology, Rural Development Administration, Suwon 441-707, Republic of Korea 2 Korean Agricultural Culture Collection (KACC), Microbial Genetics Division, National Institute of Agricultural Biotechnology, Rural Develop...

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Veröffentlicht in:International journal of systematic and evolutionary microbiology 2009-02, Vol.59 (2), p.406-410
Hauptverfasser: Weon, Hang-Yeon, Son, Jung-A, Yoo, Seung-Hee, Hong, Seung-Beom, Jeon, Young-Ah, Kwon, Soon-Wo, Koo, Bon-Sung
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container_issue 2
container_start_page 406
container_title International journal of systematic and evolutionary microbiology
container_volume 59
creator Weon, Hang-Yeon
Son, Jung-A
Yoo, Seung-Hee
Hong, Seung-Beom
Jeon, Young-Ah
Kwon, Soon-Wo
Koo, Bon-Sung
description 1 Applied Microbiology Division, National Institute of Agricultural Science and Technology, Rural Development Administration, Suwon 441-707, Republic of Korea 2 Korean Agricultural Culture Collection (KACC), Microbial Genetics Division, National Institute of Agricultural Biotechnology, Rural Development Administration, Suwon 441-707, Republic of Korea Correspondence Soon-Wo Kwon swkwon{at}rda.go.kr A pink-coloured bacterial strain, designated 5715S-9 T , was isolated from an air sample collected in Suwon, Republic of Korea. The cells were strictly aerobic, Gram-negative, non-spore-forming, non-flagellated and short-rod-shaped. On the basis of 16S rRNA gene sequence analysis, the organism was a member of the genus Rubellimicrobium , showing the highest sequence similarities with Rubellimicrobium mesophilum MSL-20 T (96.2 % sequence similarity) and Rubellimicrobium thermophilum DSM 16684 T (93.9 %). The major polar lipids were phosphatidylglycerol, phosphatidylcholine, diphosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid. The major fatty acids (>10 %) were C 18 : 1 7 c , C 16 : 0 and 11-methyl C 18 : 1 7 c . The G+C content of the DNA was 69 mol%. On the basis of both phylogenetic and phenotypic evidence, strain 5715S-9 T represents a novel species of the genus Rubellimicrobium , for which the name Rubellimicrobium aerolatum sp. nov. is proposed. The type strain is 5715S-9 T (=KACC 12504 T =DSM 19297 T ). The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain 5715S-9 T is EU338486 . A transmission electron micrograph of cells of strain 5715S-9 T and two-dimensional thin-layer chromatograms of polar lipid extracts obtained from strain 5715S-9 T and Rubellimicrobium thermophilum DSM 16684 T are available as supplementary material with the online version of this paper.
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The cells were strictly aerobic, Gram-negative, non-spore-forming, non-flagellated and short-rod-shaped. On the basis of 16S rRNA gene sequence analysis, the organism was a member of the genus Rubellimicrobium , showing the highest sequence similarities with Rubellimicrobium mesophilum MSL-20 T (96.2 % sequence similarity) and Rubellimicrobium thermophilum DSM 16684 T (93.9 %). The major polar lipids were phosphatidylglycerol, phosphatidylcholine, diphosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid. The major fatty acids (&gt;10 %) were C 18 : 1 7 c , C 16 : 0 and 11-methyl C 18 : 1 7 c . The G+C content of the DNA was 69 mol%. On the basis of both phylogenetic and phenotypic evidence, strain 5715S-9 T represents a novel species of the genus Rubellimicrobium , for which the name Rubellimicrobium aerolatum sp. nov. is proposed. The type strain is 5715S-9 T (=KACC 12504 T =DSM 19297 T ). The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain 5715S-9 T is EU338486 . A transmission electron micrograph of cells of strain 5715S-9 T and two-dimensional thin-layer chromatograms of polar lipid extracts obtained from strain 5715S-9 T and Rubellimicrobium thermophilum DSM 16684 T are available as supplementary material with the online version of this paper.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijs.0.65856-0</identifier><identifier>PMID: 19196786</identifier><language>eng</language><publisher>Reading: Soc General Microbiol</publisher><subject>Air Microbiology ; Bacteriology ; Biological and medical sciences ; Fatty Acids - analysis ; Fundamental and applied biological sciences. 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The cells were strictly aerobic, Gram-negative, non-spore-forming, non-flagellated and short-rod-shaped. On the basis of 16S rRNA gene sequence analysis, the organism was a member of the genus Rubellimicrobium , showing the highest sequence similarities with Rubellimicrobium mesophilum MSL-20 T (96.2 % sequence similarity) and Rubellimicrobium thermophilum DSM 16684 T (93.9 %). The major polar lipids were phosphatidylglycerol, phosphatidylcholine, diphosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid. The major fatty acids (&gt;10 %) were C 18 : 1 7 c , C 16 : 0 and 11-methyl C 18 : 1 7 c . The G+C content of the DNA was 69 mol%. On the basis of both phylogenetic and phenotypic evidence, strain 5715S-9 T represents a novel species of the genus Rubellimicrobium , for which the name Rubellimicrobium aerolatum sp. nov. is proposed. The type strain is 5715S-9 T (=KACC 12504 T =DSM 19297 T ). 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The cells were strictly aerobic, Gram-negative, non-spore-forming, non-flagellated and short-rod-shaped. On the basis of 16S rRNA gene sequence analysis, the organism was a member of the genus Rubellimicrobium , showing the highest sequence similarities with Rubellimicrobium mesophilum MSL-20 T (96.2 % sequence similarity) and Rubellimicrobium thermophilum DSM 16684 T (93.9 %). The major polar lipids were phosphatidylglycerol, phosphatidylcholine, diphosphatidylglycerol, phosphatidylethanolamine and an unidentified glycolipid. The major fatty acids (&gt;10 %) were C 18 : 1 7 c , C 16 : 0 and 11-methyl C 18 : 1 7 c . The G+C content of the DNA was 69 mol%. On the basis of both phylogenetic and phenotypic evidence, strain 5715S-9 T represents a novel species of the genus Rubellimicrobium , for which the name Rubellimicrobium aerolatum sp. nov. is proposed. The type strain is 5715S-9 T (=KACC 12504 T =DSM 19297 T ). The GenBank/EMBL/DDBJ accession number for the 16S rRNA gene sequence of strain 5715S-9 T is EU338486 . A transmission electron micrograph of cells of strain 5715S-9 T and two-dimensional thin-layer chromatograms of polar lipid extracts obtained from strain 5715S-9 T and Rubellimicrobium thermophilum DSM 16684 T are available as supplementary material with the online version of this paper.</abstract><cop>Reading</cop><pub>Soc General Microbiol</pub><pmid>19196786</pmid><doi>10.1099/ijs.0.65856-0</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record>
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source MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection
subjects Air Microbiology
Bacteriology
Biological and medical sciences
Fatty Acids - analysis
Fundamental and applied biological sciences. Psychology
Korea
Microbiology
Miscellaneous
Molecular Sequence Data
Phenotype
Phylogeny
Rhodobacteraceae - chemistry
Rhodobacteraceae - classification
Rhodobacteraceae - genetics
Rhodobacteraceae - isolation & purification
RNA, Ribosomal, 16S - genetics
Species Specificity
Systematics
title Rubellimicrobium aerolatum sp. nov., isolated from an air sample in Korea
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