Interactive Deformation Registration of Endorectal Prostate MRI Using ITK Thin Plate Splines

Rationale and Objectives Magnetic resonance imaging with an endorectal coil allows high-resolution imaging of prostate cancer and the surrounding normal organs. These anatomic details can be used to direct radiotherapy. However, organ deformation introduced by the endorectal coil makes it difficult...

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Veröffentlicht in:Academic radiology 2009-03, Vol.16 (3), p.351-357
Hauptverfasser: Cheung, M. Rex, MD, PhD, Krishnan, Karthik, MS
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Krishnan, Karthik, MS
description Rationale and Objectives Magnetic resonance imaging with an endorectal coil allows high-resolution imaging of prostate cancer and the surrounding normal organs. These anatomic details can be used to direct radiotherapy. However, organ deformation introduced by the endorectal coil makes it difficult to register magnetic resonance images for treatment planning. In this study, plug-ins for the volume visualization software VolView were implemented on the basis of algorithms from the National Library of Medicine's Insight Segmentation and Registration Toolkit (ITK). Materials and Methods Magnetic resonance images of a phantom simulating human pelvic structures were obtained with and without the endorectal coil balloon inflated. The prostate not deformed by the endorectal balloon was registered to the deformed prostate using an ITK thin plate spline (TPS). This plug-in allows the use of crop planes to limit the deformable registration in the region of interest around the prostate. These crop planes restricted the support of the TPS to the area around the prostate, where most of the deformation occurred. The region outside the crop planes was anchored by grid points. Results The TPS was more accurate in registering the local deformation of the prostate compared with a TPS variant, the elastic body spline. The TPS was also applied to register an in vivo T2 -weighted endorectal magnetic resonance image. The intraprostatic tumor was accurately registered. This could potentially guide the boosting of intraprostatic targets. The source and target landmarks were placed graphically. This TPS plug-in allows the registration to be undone. The landmarks could be added, removed, and adjusted in real time and in three dimensions between repeated registrations. Conclusion This interactive TPS plug-in allows a user to obtain a high level of accuracy satisfactory to a specific application efficiently. Because it is open-source software, the imaging community will be able to validate and improve the algorithm.
doi_str_mv 10.1016/j.acra.2008.09.011
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The prostate not deformed by the endorectal balloon was registered to the deformed prostate using an ITK thin plate spline (TPS). This plug-in allows the use of crop planes to limit the deformable registration in the region of interest around the prostate. These crop planes restricted the support of the TPS to the area around the prostate, where most of the deformation occurred. The region outside the crop planes was anchored by grid points. Results The TPS was more accurate in registering the local deformation of the prostate compared with a TPS variant, the elastic body spline. The TPS was also applied to register an in vivo T2 -weighted endorectal magnetic resonance image. The intraprostatic tumor was accurately registered. This could potentially guide the boosting of intraprostatic targets. The source and target landmarks were placed graphically. This TPS plug-in allows the registration to be undone. The landmarks could be added, removed, and adjusted in real time and in three dimensions between repeated registrations. Conclusion This interactive TPS plug-in allows a user to obtain a high level of accuracy satisfactory to a specific application efficiently. Because it is open-source software, the imaging community will be able to validate and improve the algorithm.</description><identifier>ISSN: 1076-6332</identifier><identifier>EISSN: 1878-4046</identifier><identifier>DOI: 10.1016/j.acra.2008.09.011</identifier><identifier>PMID: 19201364</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>deformable registration ; Equipment Design ; Equipment Failure Analysis ; Humans ; Image Enhancement - instrumentation ; Insight Segmentation and Registration Toolkit ; Magnetic Resonance Imaging - instrumentation ; Magnetic Resonance Imaging - methods ; Male ; Phantoms, Imaging ; Prostate cancer ; Prostatic Neoplasms - diagnosis ; Radiology ; radiotherapy ; Rectum - pathology ; Reproducibility of Results ; Sensitivity and Specificity ; Subtraction Technique - instrumentation ; thin plate spline</subject><ispartof>Academic radiology, 2009-03, Vol.16 (3), p.351-357</ispartof><rights>AUR</rights><rights>2009 AUR</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c409t-35c1c8bcaa4196dda47c1927d5541c450d41f7d3dca3c9c8172d053af815e7563</citedby><cites>FETCH-LOGICAL-c409t-35c1c8bcaa4196dda47c1927d5541c450d41f7d3dca3c9c8172d053af815e7563</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1076633208005692$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19201364$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cheung, M. Rex, MD, PhD</creatorcontrib><creatorcontrib>Krishnan, Karthik, MS</creatorcontrib><title>Interactive Deformation Registration of Endorectal Prostate MRI Using ITK Thin Plate Splines</title><title>Academic radiology</title><addtitle>Acad Radiol</addtitle><description>Rationale and Objectives Magnetic resonance imaging with an endorectal coil allows high-resolution imaging of prostate cancer and the surrounding normal organs. These anatomic details can be used to direct radiotherapy. However, organ deformation introduced by the endorectal coil makes it difficult to register magnetic resonance images for treatment planning. In this study, plug-ins for the volume visualization software VolView were implemented on the basis of algorithms from the National Library of Medicine's Insight Segmentation and Registration Toolkit (ITK). Materials and Methods Magnetic resonance images of a phantom simulating human pelvic structures were obtained with and without the endorectal coil balloon inflated. The prostate not deformed by the endorectal balloon was registered to the deformed prostate using an ITK thin plate spline (TPS). This plug-in allows the use of crop planes to limit the deformable registration in the region of interest around the prostate. These crop planes restricted the support of the TPS to the area around the prostate, where most of the deformation occurred. The region outside the crop planes was anchored by grid points. Results The TPS was more accurate in registering the local deformation of the prostate compared with a TPS variant, the elastic body spline. The TPS was also applied to register an in vivo T2 -weighted endorectal magnetic resonance image. The intraprostatic tumor was accurately registered. This could potentially guide the boosting of intraprostatic targets. The source and target landmarks were placed graphically. This TPS plug-in allows the registration to be undone. The landmarks could be added, removed, and adjusted in real time and in three dimensions between repeated registrations. Conclusion This interactive TPS plug-in allows a user to obtain a high level of accuracy satisfactory to a specific application efficiently. 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Rex, MD, PhD</au><au>Krishnan, Karthik, MS</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Interactive Deformation Registration of Endorectal Prostate MRI Using ITK Thin Plate Splines</atitle><jtitle>Academic radiology</jtitle><addtitle>Acad Radiol</addtitle><date>2009-03-01</date><risdate>2009</risdate><volume>16</volume><issue>3</issue><spage>351</spage><epage>357</epage><pages>351-357</pages><issn>1076-6332</issn><eissn>1878-4046</eissn><abstract>Rationale and Objectives Magnetic resonance imaging with an endorectal coil allows high-resolution imaging of prostate cancer and the surrounding normal organs. These anatomic details can be used to direct radiotherapy. However, organ deformation introduced by the endorectal coil makes it difficult to register magnetic resonance images for treatment planning. In this study, plug-ins for the volume visualization software VolView were implemented on the basis of algorithms from the National Library of Medicine's Insight Segmentation and Registration Toolkit (ITK). Materials and Methods Magnetic resonance images of a phantom simulating human pelvic structures were obtained with and without the endorectal coil balloon inflated. The prostate not deformed by the endorectal balloon was registered to the deformed prostate using an ITK thin plate spline (TPS). This plug-in allows the use of crop planes to limit the deformable registration in the region of interest around the prostate. These crop planes restricted the support of the TPS to the area around the prostate, where most of the deformation occurred. The region outside the crop planes was anchored by grid points. Results The TPS was more accurate in registering the local deformation of the prostate compared with a TPS variant, the elastic body spline. The TPS was also applied to register an in vivo T2 -weighted endorectal magnetic resonance image. The intraprostatic tumor was accurately registered. This could potentially guide the boosting of intraprostatic targets. The source and target landmarks were placed graphically. This TPS plug-in allows the registration to be undone. The landmarks could be added, removed, and adjusted in real time and in three dimensions between repeated registrations. Conclusion This interactive TPS plug-in allows a user to obtain a high level of accuracy satisfactory to a specific application efficiently. Because it is open-source software, the imaging community will be able to validate and improve the algorithm.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>19201364</pmid><doi>10.1016/j.acra.2008.09.011</doi><tpages>7</tpages></addata></record>
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subjects deformable registration
Equipment Design
Equipment Failure Analysis
Humans
Image Enhancement - instrumentation
Insight Segmentation and Registration Toolkit
Magnetic Resonance Imaging - instrumentation
Magnetic Resonance Imaging - methods
Male
Phantoms, Imaging
Prostate cancer
Prostatic Neoplasms - diagnosis
Radiology
radiotherapy
Rectum - pathology
Reproducibility of Results
Sensitivity and Specificity
Subtraction Technique - instrumentation
thin plate spline
title Interactive Deformation Registration of Endorectal Prostate MRI Using ITK Thin Plate Splines
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