DNA polymerase kappa from Trypanosoma cruzi localizes to the mitochondria, bypasses 8-oxoguanine lesions and performs DNA synthesis in a recombination intermediate
DNA polymerase kappa (Polκ) is a low-fidelity polymerase that has the ability to bypass several types of lesions. The biological role of this enzyme, a member of the DinB subfamily of Y-family DNA polymerases, has remained elusive. In this report, we studied one of the two copies of Polκ from the pr...
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description | DNA polymerase kappa (Polκ) is a low-fidelity polymerase that has the ability to bypass several types of lesions. The biological role of this enzyme, a member of the DinB subfamily of Y-family DNA polymerases, has remained elusive. In this report, we studied one of the two copies of Polκ from the protozoan Trypanosoma cruzi (TcPolκ). The role of this TcPolκ copy was investigated by analysing its subcellular localization, its activities in vitro, and performing experiments with parasites that overexpress this polymerase. The TcPOLK sequence has the N-terminal extension which is present only in eukaryotic DinB members, but its C-terminal region is more similar to prokaryotic and archaeal counterparts since it lacks C₂HC motifs and PCNA interaction domain. Our results indicate that in contrast to its previously described orthologues, this polymerase is localized to mitochondria. The overexpression of TcPOLK increases T. cruzi resistance to hydrogen peroxide, and in vitro polymerization assays revealed that TcPolκ efficiently bypasses 8-oxoguanine lesions. Remarkably, our results also demonstrate that the DinB subfamily of polymerases can participate in homologous recombination, based on our findings that TcPolκ increases T. cruzi resistance to high doses of gamma irradiation and zeocin and can catalyse DNA synthesis within recombination intermediates. |
doi_str_mv | 10.1111/j.1365-2958.2008.06521.x |
format | Article |
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The biological role of this enzyme, a member of the DinB subfamily of Y-family DNA polymerases, has remained elusive. In this report, we studied one of the two copies of Polκ from the protozoan Trypanosoma cruzi (TcPolκ). The role of this TcPolκ copy was investigated by analysing its subcellular localization, its activities in vitro, and performing experiments with parasites that overexpress this polymerase. The TcPOLK sequence has the N-terminal extension which is present only in eukaryotic DinB members, but its C-terminal region is more similar to prokaryotic and archaeal counterparts since it lacks C₂HC motifs and PCNA interaction domain. Our results indicate that in contrast to its previously described orthologues, this polymerase is localized to mitochondria. The overexpression of TcPOLK increases T. cruzi resistance to hydrogen peroxide, and in vitro polymerization assays revealed that TcPolκ efficiently bypasses 8-oxoguanine lesions. Remarkably, our results also demonstrate that the DinB subfamily of polymerases can participate in homologous recombination, based on our findings that TcPolκ increases T. cruzi resistance to high doses of gamma irradiation and zeocin and can catalyse DNA synthesis within recombination intermediates.</description><identifier>ISSN: 0950-382X</identifier><identifier>EISSN: 1365-2958</identifier><identifier>DOI: 10.1111/j.1365-2958.2008.06521.x</identifier><identifier>PMID: 19007414</identifier><language>eng</language><publisher>Oxford, UK: Oxford, UK : Blackwell Publishing Ltd</publisher><subject>Amino Acid Sequence ; Animals ; Biological and medical sciences ; DNA Damage ; DNA polymerase ; DNA Replication ; DNA, Protozoan - genetics ; DNA-Directed DNA Polymerase - genetics ; DNA-Directed DNA Polymerase - metabolism ; Enzymes ; Fundamental and applied biological sciences. Psychology ; Gene expression ; Guanine - analogs & derivatives ; Guanine - metabolism ; Hydrogen Peroxide - pharmacology ; Life cycle. Host-agent relationship. Pathogenesis ; Microbiology ; Mitochondria ; Mitochondria - genetics ; Molecular biology ; Molecular Sequence Data ; Oxidative Stress ; Parasitic protozoa ; Polymerization ; Protozoa ; Protozoan Proteins - genetics ; Protozoan Proteins - metabolism ; Recombination, Genetic ; Studies ; Trypanosoma cruzi ; Trypanosoma cruzi - drug effects ; Trypanosoma cruzi - genetics ; Trypanosoma cruzi - metabolism</subject><ispartof>Molecular microbiology, 2009-01, Vol.71 (1), p.185-197</ispartof><rights>2008 The Authors. Journal compilation © 2008 Blackwell Publishing Ltd</rights><rights>2009 INIST-CNRS</rights><rights>Copyright Blackwell Publishing Ltd. Jan 2009</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5451-d29f6a285caa10182e4a5df8ee509b7a8480ddb35f5062462ba90d8faa2ba3553</citedby><cites>FETCH-LOGICAL-c5451-d29f6a285caa10182e4a5df8ee509b7a8480ddb35f5062462ba90d8faa2ba3553</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1365-2958.2008.06521.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1365-2958.2008.06521.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,777,781,1412,1428,27905,27906,45555,45556,46390,46814</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=20956394$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19007414$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rajão, M.A</creatorcontrib><creatorcontrib>Passos-Silva, D.G</creatorcontrib><creatorcontrib>DaRocha, W.D</creatorcontrib><creatorcontrib>Franco, G.R</creatorcontrib><creatorcontrib>Macedo, A.M</creatorcontrib><creatorcontrib>Pena, S.D.J</creatorcontrib><creatorcontrib>Teixeira, S.M</creatorcontrib><creatorcontrib>Machado, C.R</creatorcontrib><title>DNA polymerase kappa from Trypanosoma cruzi localizes to the mitochondria, bypasses 8-oxoguanine lesions and performs DNA synthesis in a recombination intermediate</title><title>Molecular microbiology</title><addtitle>Mol Microbiol</addtitle><description>DNA polymerase kappa (Polκ) is a low-fidelity polymerase that has the ability to bypass several types of lesions. The biological role of this enzyme, a member of the DinB subfamily of Y-family DNA polymerases, has remained elusive. In this report, we studied one of the two copies of Polκ from the protozoan Trypanosoma cruzi (TcPolκ). The role of this TcPolκ copy was investigated by analysing its subcellular localization, its activities in vitro, and performing experiments with parasites that overexpress this polymerase. The TcPOLK sequence has the N-terminal extension which is present only in eukaryotic DinB members, but its C-terminal region is more similar to prokaryotic and archaeal counterparts since it lacks C₂HC motifs and PCNA interaction domain. Our results indicate that in contrast to its previously described orthologues, this polymerase is localized to mitochondria. The overexpression of TcPOLK increases T. cruzi resistance to hydrogen peroxide, and in vitro polymerization assays revealed that TcPolκ efficiently bypasses 8-oxoguanine lesions. Remarkably, our results also demonstrate that the DinB subfamily of polymerases can participate in homologous recombination, based on our findings that TcPolκ increases T. cruzi resistance to high doses of gamma irradiation and zeocin and can catalyse DNA synthesis within recombination intermediates.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Biological and medical sciences</subject><subject>DNA Damage</subject><subject>DNA polymerase</subject><subject>DNA Replication</subject><subject>DNA, Protozoan - genetics</subject><subject>DNA-Directed DNA Polymerase - genetics</subject><subject>DNA-Directed DNA Polymerase - metabolism</subject><subject>Enzymes</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene expression</subject><subject>Guanine - analogs & derivatives</subject><subject>Guanine - metabolism</subject><subject>Hydrogen Peroxide - pharmacology</subject><subject>Life cycle. Host-agent relationship. Pathogenesis</subject><subject>Microbiology</subject><subject>Mitochondria</subject><subject>Mitochondria - genetics</subject><subject>Molecular biology</subject><subject>Molecular Sequence Data</subject><subject>Oxidative Stress</subject><subject>Parasitic protozoa</subject><subject>Polymerization</subject><subject>Protozoa</subject><subject>Protozoan Proteins - genetics</subject><subject>Protozoan Proteins - metabolism</subject><subject>Recombination, Genetic</subject><subject>Studies</subject><subject>Trypanosoma cruzi</subject><subject>Trypanosoma cruzi - drug effects</subject><subject>Trypanosoma cruzi - genetics</subject><subject>Trypanosoma cruzi - metabolism</subject><issn>0950-382X</issn><issn>1365-2958</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkktv1DAQxyMEotvCVwALiZ5I8CPOOoceqvKq1MKBVuJmTRKn9ZLYwZOITb8OXxSnuyoSF7APHnl-8_D8nSSE0YzF9XaTMVHIlJdSZZxSldFCcpZtHyWrB8fjZEVLSVOh-LeD5BBxQykTtBBPkwNWUrrOWb5Kfr37fEoG3829CYCGfIdhANIG35OrMA_gPPoeSB2mO0s6X0Nn7wyS0ZPx1pDejr6-9a4JFt6QKvKI0atSv_U3EzjrDOkMWu-QgGvIYELrQ49kqYqziznQIrGOAAmm9n1lHYwRj1ejCb1pLIzmWfKkhQ7N8_15lFx_eH919im9-PLx_Oz0Iq1lLlna8LItgCtZAzDKFDc5yKZVxkhaVmtQuaJNUwnZSlrwvOAVlLRRLUC0hJTiKDne5R2C_zEZHHVvsTZdB874CXVRqLyMc_snyKmIu1zAV3-BGz8FFx-hWRklK7lYR0jtoDp4xGBaPQTbQ5g1o3qRW2_0oqpeVNWL3Ppebr2NoS_2-acqDutP4F7fCLzeA4BRuzaAqy0-cDz-kELcN3qy437azsz_3YC-vDxfrBj_chffgtdwE2KN6698-W9MriUTTPwGFk3R0w</recordid><startdate>200901</startdate><enddate>200901</enddate><creator>Rajão, M.A</creator><creator>Passos-Silva, D.G</creator><creator>DaRocha, W.D</creator><creator>Franco, G.R</creator><creator>Macedo, A.M</creator><creator>Pena, S.D.J</creator><creator>Teixeira, S.M</creator><creator>Machado, C.R</creator><general>Oxford, UK : Blackwell Publishing Ltd</general><general>Blackwell Publishing Ltd</general><general>Blackwell</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>200901</creationdate><title>DNA polymerase kappa from Trypanosoma cruzi localizes to the mitochondria, bypasses 8-oxoguanine lesions and performs DNA synthesis in a recombination intermediate</title><author>Rajão, M.A ; Passos-Silva, D.G ; DaRocha, W.D ; Franco, G.R ; Macedo, A.M ; Pena, S.D.J ; Teixeira, S.M ; Machado, C.R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5451-d29f6a285caa10182e4a5df8ee509b7a8480ddb35f5062462ba90d8faa2ba3553</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Biological and medical sciences</topic><topic>DNA Damage</topic><topic>DNA polymerase</topic><topic>DNA Replication</topic><topic>DNA, Protozoan - genetics</topic><topic>DNA-Directed DNA Polymerase - genetics</topic><topic>DNA-Directed DNA Polymerase - metabolism</topic><topic>Enzymes</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene expression</topic><topic>Guanine - analogs & derivatives</topic><topic>Guanine - metabolism</topic><topic>Hydrogen Peroxide - pharmacology</topic><topic>Life cycle. Host-agent relationship. Pathogenesis</topic><topic>Microbiology</topic><topic>Mitochondria</topic><topic>Mitochondria - genetics</topic><topic>Molecular biology</topic><topic>Molecular Sequence Data</topic><topic>Oxidative Stress</topic><topic>Parasitic protozoa</topic><topic>Polymerization</topic><topic>Protozoa</topic><topic>Protozoan Proteins - genetics</topic><topic>Protozoan Proteins - metabolism</topic><topic>Recombination, Genetic</topic><topic>Studies</topic><topic>Trypanosoma cruzi</topic><topic>Trypanosoma cruzi - drug effects</topic><topic>Trypanosoma cruzi - genetics</topic><topic>Trypanosoma cruzi - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rajão, M.A</creatorcontrib><creatorcontrib>Passos-Silva, D.G</creatorcontrib><creatorcontrib>DaRocha, W.D</creatorcontrib><creatorcontrib>Franco, G.R</creatorcontrib><creatorcontrib>Macedo, A.M</creatorcontrib><creatorcontrib>Pena, S.D.J</creatorcontrib><creatorcontrib>Teixeira, S.M</creatorcontrib><creatorcontrib>Machado, C.R</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rajão, M.A</au><au>Passos-Silva, D.G</au><au>DaRocha, W.D</au><au>Franco, G.R</au><au>Macedo, A.M</au><au>Pena, S.D.J</au><au>Teixeira, S.M</au><au>Machado, C.R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>DNA polymerase kappa from Trypanosoma cruzi localizes to the mitochondria, bypasses 8-oxoguanine lesions and performs DNA synthesis in a recombination intermediate</atitle><jtitle>Molecular microbiology</jtitle><addtitle>Mol Microbiol</addtitle><date>2009-01</date><risdate>2009</risdate><volume>71</volume><issue>1</issue><spage>185</spage><epage>197</epage><pages>185-197</pages><issn>0950-382X</issn><eissn>1365-2958</eissn><abstract>DNA polymerase kappa (Polκ) is a low-fidelity polymerase that has the ability to bypass several types of lesions. The biological role of this enzyme, a member of the DinB subfamily of Y-family DNA polymerases, has remained elusive. In this report, we studied one of the two copies of Polκ from the protozoan Trypanosoma cruzi (TcPolκ). The role of this TcPolκ copy was investigated by analysing its subcellular localization, its activities in vitro, and performing experiments with parasites that overexpress this polymerase. The TcPOLK sequence has the N-terminal extension which is present only in eukaryotic DinB members, but its C-terminal region is more similar to prokaryotic and archaeal counterparts since it lacks C₂HC motifs and PCNA interaction domain. Our results indicate that in contrast to its previously described orthologues, this polymerase is localized to mitochondria. The overexpression of TcPOLK increases T. cruzi resistance to hydrogen peroxide, and in vitro polymerization assays revealed that TcPolκ efficiently bypasses 8-oxoguanine lesions. Remarkably, our results also demonstrate that the DinB subfamily of polymerases can participate in homologous recombination, based on our findings that TcPolκ increases T. cruzi resistance to high doses of gamma irradiation and zeocin and can catalyse DNA synthesis within recombination intermediates.</abstract><cop>Oxford, UK</cop><pub>Oxford, UK : Blackwell Publishing Ltd</pub><pmid>19007414</pmid><doi>10.1111/j.1365-2958.2008.06521.x</doi><tpages>13</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Biological and medical sciences DNA Damage DNA polymerase DNA Replication DNA, Protozoan - genetics DNA-Directed DNA Polymerase - genetics DNA-Directed DNA Polymerase - metabolism Enzymes Fundamental and applied biological sciences. Psychology Gene expression Guanine - analogs & derivatives Guanine - metabolism Hydrogen Peroxide - pharmacology Life cycle. Host-agent relationship. Pathogenesis Microbiology Mitochondria Mitochondria - genetics Molecular biology Molecular Sequence Data Oxidative Stress Parasitic protozoa Polymerization Protozoa Protozoan Proteins - genetics Protozoan Proteins - metabolism Recombination, Genetic Studies Trypanosoma cruzi Trypanosoma cruzi - drug effects Trypanosoma cruzi - genetics Trypanosoma cruzi - metabolism |
title | DNA polymerase kappa from Trypanosoma cruzi localizes to the mitochondria, bypasses 8-oxoguanine lesions and performs DNA synthesis in a recombination intermediate |
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