Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology

Although variation in effect sizes and predicted values among studies of similar phenomena is inevitable, such variation far exceeds what might be produced by sampling error alone. One possible explanation for variation among results is differences among researchers in the decisions they make regard...

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Veröffentlicht in:BMC biology 2025-02, Vol.23 (1), p.35-36, Article 35
Hauptverfasser: Gould, Elliot, Fraser, Hannah S, Parker, Timothy H, Nakagawa, Shinichi, Griffith, Simon C, Vesk, Peter A, Fidler, Fiona, Hamilton, Daniel G, Abbey-Lee, Robin N, Abbott, Jessica K, Aguirre, Luis A, Alcaraz, Carles, Aloni, Irith, Altschul, Drew, Arekar, Kunal, Atkins, Jeff W, Atkinson, Joe, Baker, Christopher M, Barrett, Meghan, Bell, Kristian, Bello, Suleiman Kehinde, Beltrán, Iván, Berauer, Bernd J, Bertram, Michael Grant, Billman, Peter D, Blake, Charlie K, Blake, Shannon, Bliard, Louis, Bonisoli-Alquati, Andrea, Bonnet, Timothée, Bordes, Camille Nina Marion, Bose, Aneesh P H, Botterill-James, Thomas, Boyd, Melissa Anna, Boyle, Sarah A, Bradfer-Lawrence, Tom, Bradham, Jennifer, Brand, Jack A, Brengdahl, Martin I, Bulla, Martin, Bussière, Luc, Camerlenghi, Ettore, Campbell, Sara E, Campos, Leonardo L F, Caravaggi, Anthony, Cardoso, Pedro, Carroll, Charles J W, Catanach, Therese A, Chen, Xuan, Chik, Heung Ying Janet, Choy, Emily Sarah, Christie, Alec Philip, Chuang, Angela, Chunco, Amanda J, Clark, Bethany L, Contina, Andrea, Covernton, Garth A, Cox, Murray P, Cressman, Kimberly A, Crotti, Marco, Crouch, Connor Davidson, D'Amelio, Pietro B, de Sousa, Alexandra Allison, Döbert, Timm Fabian, Dobler, Ralph, Dobson, Adam J, Doherty, Tim S, Drobniak, Szymon Marian, Duffy, Alexandra Grace, Duncan, Alison B, Dunn, Robert P, Dunning, Jamie, Dutta, Trishna, Eberhart-Hertel, Luke, Elmore, Jared Alan, Elsherif, Mahmoud Medhat, English, Holly M, Ensminger, David C, Ernst, Ulrich Rainer, Ferguson, Stephen M, Fernandez-Juricic, Esteban, Ferreira-Arruda, Thalita, Fieberg, John, Finch, Elizabeth A, Fiorenza, Evan A, Fisher, David N, Fontaine, Amélie, Forstmeier, Wolfgang, Fourcade, Yoan, Frank, Graham S, Freund, Cathryn A, Fuentes-Lillo, Eduardo, Gandy, Sara L, Gannon, Dustin G, García-Cervigón, Ana I, Garretson, Alexis C, Ge, Xuezhen, Geary, William L, Géron, Charly, Gilles, Marc
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container_issue 1
container_start_page 35
container_title BMC biology
container_volume 23
creator Gould, Elliot
Fraser, Hannah S
Parker, Timothy H
Nakagawa, Shinichi
Griffith, Simon C
Vesk, Peter A
Fidler, Fiona
Hamilton, Daniel G
Abbey-Lee, Robin N
Abbott, Jessica K
Aguirre, Luis A
Alcaraz, Carles
Aloni, Irith
Altschul, Drew
Arekar, Kunal
Atkins, Jeff W
Atkinson, Joe
Baker, Christopher M
Barrett, Meghan
Bell, Kristian
Bello, Suleiman Kehinde
Beltrán, Iván
Berauer, Bernd J
Bertram, Michael Grant
Billman, Peter D
Blake, Charlie K
Blake, Shannon
Bliard, Louis
Bonisoli-Alquati, Andrea
Bonnet, Timothée
Bordes, Camille Nina Marion
Bose, Aneesh P H
Botterill-James, Thomas
Boyd, Melissa Anna
Boyle, Sarah A
Bradfer-Lawrence, Tom
Bradham, Jennifer
Brand, Jack A
Brengdahl, Martin I
Bulla, Martin
Bussière, Luc
Camerlenghi, Ettore
Campbell, Sara E
Campos, Leonardo L F
Caravaggi, Anthony
Cardoso, Pedro
Carroll, Charles J W
Catanach, Therese A
Chen, Xuan
Chik, Heung Ying Janet
Choy, Emily Sarah
Christie, Alec Philip
Chuang, Angela
Chunco, Amanda J
Clark, Bethany L
Contina, Andrea
Covernton, Garth A
Cox, Murray P
Cressman, Kimberly A
Crotti, Marco
Crouch, Connor Davidson
D'Amelio, Pietro B
de Sousa, Alexandra Allison
Döbert, Timm Fabian
Dobler, Ralph
Dobson, Adam J
Doherty, Tim S
Drobniak, Szymon Marian
Duffy, Alexandra Grace
Duncan, Alison B
Dunn, Robert P
Dunning, Jamie
Dutta, Trishna
Eberhart-Hertel, Luke
Elmore, Jared Alan
Elsherif, Mahmoud Medhat
English, Holly M
Ensminger, David C
Ernst, Ulrich Rainer
Ferguson, Stephen M
Fernandez-Juricic, Esteban
Ferreira-Arruda, Thalita
Fieberg, John
Finch, Elizabeth A
Fiorenza, Evan A
Fisher, David N
Fontaine, Amélie
Forstmeier, Wolfgang
Fourcade, Yoan
Frank, Graham S
Freund, Cathryn A
Fuentes-Lillo, Eduardo
Gandy, Sara L
Gannon, Dustin G
García-Cervigón, Ana I
Garretson, Alexis C
Ge, Xuezhen
Geary, William L
Géron, Charly
Gilles, Marc
description Although variation in effect sizes and predicted values among studies of similar phenomena is inevitable, such variation far exceeds what might be produced by sampling error alone. One possible explanation for variation among results is differences among researchers in the decisions they make regarding statistical analyses. A growing array of studies has explored this analytical variability in different fields and has found substantial variability among results despite analysts having the same data and research question. Many of these studies have been in the social sciences, but one small "many analyst" study found similar variability in ecology. We expanded the scope of this prior work by implementing a large-scale empirical exploration of the variation in effect sizes and model predictions generated by the analytical decisions of different researchers in ecology and evolutionary biology. We used two unpublished datasets, one from evolutionary ecology (blue tit, Cyanistes caeruleus, to compare sibling number and nestling growth) and one from conservation ecology (Eucalyptus, to compare grass cover and tree seedling recruitment). The project leaders recruited 174 analyst teams, comprising 246 analysts, to investigate the answers to prespecified research questions. Analyses conducted by these teams yielded 141 usable effects (compatible with our meta-analyses and with all necessary information provided) for the blue tit dataset, and 85 usable effects for the Eucalyptus dataset. We found substantial heterogeneity among results for both datasets, although the patterns of variation differed between them. For the blue tit analyses, the average effect was convincingly negative, with less growth for nestlings living with more siblings, but there was near continuous variation in effect size from large negative effects to effects near zero, and even effects crossing the traditional threshold of statistical significance in the opposite direction. In contrast, the average relationship between grass cover and Eucalyptus seedling number was only slightly negative and not convincingly different from zero, and most effects ranged from weakly negative to weakly positive, with about a third of effects crossing the traditional threshold of significance in one direction or the other. However, there were also several striking outliers in the Eucalyptus dataset, with effects far from zero. For both datasets, we found substantial variation in the variable selection and random
doi_str_mv 10.1186/s12915-024-02101-x
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Fraser, Hannah S ; Parker, Timothy H ; Nakagawa, Shinichi ; Griffith, Simon C ; Vesk, Peter A ; Fidler, Fiona ; Hamilton, Daniel G ; Abbey-Lee, Robin N ; Abbott, Jessica K ; Aguirre, Luis A ; Alcaraz, Carles ; Aloni, Irith ; Altschul, Drew ; Arekar, Kunal ; Atkins, Jeff W ; Atkinson, Joe ; Baker, Christopher M ; Barrett, Meghan ; Bell, Kristian ; Bello, Suleiman Kehinde ; Beltrán, Iván ; Berauer, Bernd J ; Bertram, Michael Grant ; Billman, Peter D ; Blake, Charlie K ; Blake, Shannon ; Bliard, Louis ; Bonisoli-Alquati, Andrea ; Bonnet, Timothée ; Bordes, Camille Nina Marion ; Bose, Aneesh P H ; Botterill-James, Thomas ; Boyd, Melissa Anna ; Boyle, Sarah A ; Bradfer-Lawrence, Tom ; Bradham, Jennifer ; Brand, Jack A ; Brengdahl, Martin I ; Bulla, Martin ; Bussière, Luc ; Camerlenghi, Ettore ; Campbell, Sara E ; Campos, Leonardo L F ; Caravaggi, Anthony ; Cardoso, Pedro ; Carroll, Charles J W ; Catanach, Therese A ; Chen, Xuan ; Chik, Heung Ying Janet ; Choy, Emily Sarah ; Christie, Alec Philip ; Chuang, Angela ; Chunco, Amanda J ; Clark, Bethany L ; Contina, Andrea ; Covernton, Garth A ; Cox, Murray P ; Cressman, Kimberly A ; Crotti, Marco ; Crouch, Connor Davidson ; D'Amelio, Pietro B ; de Sousa, Alexandra Allison ; Döbert, Timm Fabian ; Dobler, Ralph ; Dobson, Adam J ; Doherty, Tim S ; Drobniak, Szymon Marian ; Duffy, Alexandra Grace ; Duncan, Alison B ; Dunn, Robert P ; Dunning, Jamie ; Dutta, Trishna ; Eberhart-Hertel, Luke ; Elmore, Jared Alan ; Elsherif, Mahmoud Medhat ; English, Holly M ; Ensminger, David C ; Ernst, Ulrich Rainer ; Ferguson, Stephen M ; Fernandez-Juricic, Esteban ; Ferreira-Arruda, Thalita ; Fieberg, John ; Finch, Elizabeth A ; Fiorenza, Evan A ; Fisher, David N ; Fontaine, Amélie ; Forstmeier, Wolfgang ; Fourcade, Yoan ; Frank, Graham S ; Freund, Cathryn A ; Fuentes-Lillo, Eduardo ; Gandy, Sara L ; Gannon, Dustin G ; García-Cervigón, Ana I ; Garretson, Alexis C ; Ge, Xuezhen ; Geary, William L ; Géron, Charly ; Gilles, Marc</creator><creatorcontrib>Gould, Elliot ; Fraser, Hannah S ; Parker, Timothy H ; Nakagawa, Shinichi ; Griffith, Simon C ; Vesk, Peter A ; Fidler, Fiona ; Hamilton, Daniel G ; Abbey-Lee, Robin N ; Abbott, Jessica K ; Aguirre, Luis A ; Alcaraz, Carles ; Aloni, Irith ; Altschul, Drew ; Arekar, Kunal ; Atkins, Jeff W ; Atkinson, Joe ; Baker, Christopher M ; Barrett, Meghan ; Bell, Kristian ; Bello, Suleiman Kehinde ; Beltrán, Iván ; Berauer, Bernd J ; Bertram, Michael Grant ; Billman, Peter D ; Blake, Charlie K ; Blake, Shannon ; Bliard, Louis ; Bonisoli-Alquati, Andrea ; Bonnet, Timothée ; Bordes, Camille Nina Marion ; Bose, Aneesh P H ; Botterill-James, Thomas ; Boyd, Melissa Anna ; Boyle, Sarah A ; Bradfer-Lawrence, Tom ; Bradham, Jennifer ; Brand, Jack A ; Brengdahl, Martin I ; Bulla, Martin ; Bussière, Luc ; Camerlenghi, Ettore ; Campbell, Sara E ; Campos, Leonardo L F ; Caravaggi, Anthony ; Cardoso, Pedro ; Carroll, Charles J W ; Catanach, Therese A ; Chen, Xuan ; Chik, Heung Ying Janet ; Choy, Emily Sarah ; Christie, Alec Philip ; Chuang, Angela ; Chunco, Amanda J ; Clark, Bethany L ; Contina, Andrea ; Covernton, Garth A ; Cox, Murray P ; Cressman, Kimberly A ; Crotti, Marco ; Crouch, Connor Davidson ; D'Amelio, Pietro B ; de Sousa, Alexandra Allison ; Döbert, Timm Fabian ; Dobler, Ralph ; Dobson, Adam J ; Doherty, Tim S ; Drobniak, Szymon Marian ; Duffy, Alexandra Grace ; Duncan, Alison B ; Dunn, Robert P ; Dunning, Jamie ; Dutta, Trishna ; Eberhart-Hertel, Luke ; Elmore, Jared Alan ; Elsherif, Mahmoud Medhat ; English, Holly M ; Ensminger, David C ; Ernst, Ulrich Rainer ; Ferguson, Stephen M ; Fernandez-Juricic, Esteban ; Ferreira-Arruda, Thalita ; Fieberg, John ; Finch, Elizabeth A ; Fiorenza, Evan A ; Fisher, David N ; Fontaine, Amélie ; Forstmeier, Wolfgang ; Fourcade, Yoan ; Frank, Graham S ; Freund, Cathryn A ; Fuentes-Lillo, Eduardo ; Gandy, Sara L ; Gannon, Dustin G ; García-Cervigón, Ana I ; Garretson, Alexis C ; Ge, Xuezhen ; Geary, William L ; Géron, Charly ; Gilles, Marc</creatorcontrib><description>Although variation in effect sizes and predicted values among studies of similar phenomena is inevitable, such variation far exceeds what might be produced by sampling error alone. One possible explanation for variation among results is differences among researchers in the decisions they make regarding statistical analyses. A growing array of studies has explored this analytical variability in different fields and has found substantial variability among results despite analysts having the same data and research question. Many of these studies have been in the social sciences, but one small "many analyst" study found similar variability in ecology. We expanded the scope of this prior work by implementing a large-scale empirical exploration of the variation in effect sizes and model predictions generated by the analytical decisions of different researchers in ecology and evolutionary biology. We used two unpublished datasets, one from evolutionary ecology (blue tit, Cyanistes caeruleus, to compare sibling number and nestling growth) and one from conservation ecology (Eucalyptus, to compare grass cover and tree seedling recruitment). The project leaders recruited 174 analyst teams, comprising 246 analysts, to investigate the answers to prespecified research questions. Analyses conducted by these teams yielded 141 usable effects (compatible with our meta-analyses and with all necessary information provided) for the blue tit dataset, and 85 usable effects for the Eucalyptus dataset. We found substantial heterogeneity among results for both datasets, although the patterns of variation differed between them. For the blue tit analyses, the average effect was convincingly negative, with less growth for nestlings living with more siblings, but there was near continuous variation in effect size from large negative effects to effects near zero, and even effects crossing the traditional threshold of statistical significance in the opposite direction. In contrast, the average relationship between grass cover and Eucalyptus seedling number was only slightly negative and not convincingly different from zero, and most effects ranged from weakly negative to weakly positive, with about a third of effects crossing the traditional threshold of significance in one direction or the other. However, there were also several striking outliers in the Eucalyptus dataset, with effects far from zero. For both datasets, we found substantial variation in the variable selection and random effects structures among analyses, as well as in the ratings of the analytical methods by peer reviewers, but we found no strong relationship between any of these and deviation from the meta-analytic mean. In other words, analyses with results that were far from the mean were no more or less likely to have dissimilar variable sets, use random effects in their models, or receive poor peer reviews than those analyses that found results that were close to the mean. The existence of substantial variability among analysis outcomes raises important questions about how ecologists and evolutionary biologists should interpret published results, and how they should conduct analyses in the future.</description><identifier>ISSN: 1741-7007</identifier><identifier>EISSN: 1741-7007</identifier><identifier>DOI: 10.1186/s12915-024-02101-x</identifier><identifier>PMID: 39915771</identifier><language>eng</language><publisher>England: BioMed Central</publisher><subject>Analytical heterogeneity ; Animals ; Athletic recruitment ; Biological effects ; Biological Evolution ; Biology ; Data analysis ; Datasets ; Decision making ; Decisions ; Developmental biology ; Ecology ; Ecology - methods ; Error analysis ; Eucalyptus ; Eucalyptus - growth &amp; development ; Evolution ; Evolutionary biology ; Grasses ; Heterogeneity ; Hypotheses ; Many-analyst ; Mathematical analysis ; Mean ; Medical imaging ; Metascience ; Methods ; Neuroimaging ; Outliers (statistics) ; Parameter estimation ; Passeriformes - physiology ; Predictions ; Professional football ; Replication crisis ; Reproducibility ; Researchers ; Reviews ; Seedlings ; Siblings ; Social sciences ; Statistical analysis ; Statistics ; Teams ; Variability ; Variables ; Variation</subject><ispartof>BMC biology, 2025-02, Vol.23 (1), p.35-36, Article 35</ispartof><rights>2025. 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Fabian</creatorcontrib><creatorcontrib>Dobler, Ralph</creatorcontrib><creatorcontrib>Dobson, Adam J</creatorcontrib><creatorcontrib>Doherty, Tim S</creatorcontrib><creatorcontrib>Drobniak, Szymon Marian</creatorcontrib><creatorcontrib>Duffy, Alexandra Grace</creatorcontrib><creatorcontrib>Duncan, Alison B</creatorcontrib><creatorcontrib>Dunn, Robert P</creatorcontrib><creatorcontrib>Dunning, Jamie</creatorcontrib><creatorcontrib>Dutta, Trishna</creatorcontrib><creatorcontrib>Eberhart-Hertel, Luke</creatorcontrib><creatorcontrib>Elmore, Jared Alan</creatorcontrib><creatorcontrib>Elsherif, Mahmoud Medhat</creatorcontrib><creatorcontrib>English, Holly M</creatorcontrib><creatorcontrib>Ensminger, David C</creatorcontrib><creatorcontrib>Ernst, Ulrich Rainer</creatorcontrib><creatorcontrib>Ferguson, Stephen M</creatorcontrib><creatorcontrib>Fernandez-Juricic, Esteban</creatorcontrib><creatorcontrib>Ferreira-Arruda, Thalita</creatorcontrib><creatorcontrib>Fieberg, John</creatorcontrib><creatorcontrib>Finch, Elizabeth A</creatorcontrib><creatorcontrib>Fiorenza, Evan A</creatorcontrib><creatorcontrib>Fisher, David N</creatorcontrib><creatorcontrib>Fontaine, Amélie</creatorcontrib><creatorcontrib>Forstmeier, Wolfgang</creatorcontrib><creatorcontrib>Fourcade, Yoan</creatorcontrib><creatorcontrib>Frank, Graham S</creatorcontrib><creatorcontrib>Freund, Cathryn A</creatorcontrib><creatorcontrib>Fuentes-Lillo, Eduardo</creatorcontrib><creatorcontrib>Gandy, Sara L</creatorcontrib><creatorcontrib>Gannon, Dustin G</creatorcontrib><creatorcontrib>García-Cervigón, Ana I</creatorcontrib><creatorcontrib>Garretson, Alexis C</creatorcontrib><creatorcontrib>Ge, Xuezhen</creatorcontrib><creatorcontrib>Geary, William L</creatorcontrib><creatorcontrib>Géron, Charly</creatorcontrib><creatorcontrib>Gilles, Marc</creatorcontrib><title>Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology</title><title>BMC biology</title><addtitle>BMC Biol</addtitle><description>Although variation in effect sizes and predicted values among studies of similar phenomena is inevitable, such variation far exceeds what might be produced by sampling error alone. One possible explanation for variation among results is differences among researchers in the decisions they make regarding statistical analyses. A growing array of studies has explored this analytical variability in different fields and has found substantial variability among results despite analysts having the same data and research question. Many of these studies have been in the social sciences, but one small "many analyst" study found similar variability in ecology. We expanded the scope of this prior work by implementing a large-scale empirical exploration of the variation in effect sizes and model predictions generated by the analytical decisions of different researchers in ecology and evolutionary biology. We used two unpublished datasets, one from evolutionary ecology (blue tit, Cyanistes caeruleus, to compare sibling number and nestling growth) and one from conservation ecology (Eucalyptus, to compare grass cover and tree seedling recruitment). The project leaders recruited 174 analyst teams, comprising 246 analysts, to investigate the answers to prespecified research questions. Analyses conducted by these teams yielded 141 usable effects (compatible with our meta-analyses and with all necessary information provided) for the blue tit dataset, and 85 usable effects for the Eucalyptus dataset. We found substantial heterogeneity among results for both datasets, although the patterns of variation differed between them. For the blue tit analyses, the average effect was convincingly negative, with less growth for nestlings living with more siblings, but there was near continuous variation in effect size from large negative effects to effects near zero, and even effects crossing the traditional threshold of statistical significance in the opposite direction. In contrast, the average relationship between grass cover and Eucalyptus seedling number was only slightly negative and not convincingly different from zero, and most effects ranged from weakly negative to weakly positive, with about a third of effects crossing the traditional threshold of significance in one direction or the other. However, there were also several striking outliers in the Eucalyptus dataset, with effects far from zero. For both datasets, we found substantial variation in the variable selection and random effects structures among analyses, as well as in the ratings of the analytical methods by peer reviewers, but we found no strong relationship between any of these and deviation from the meta-analytic mean. In other words, analyses with results that were far from the mean were no more or less likely to have dissimilar variable sets, use random effects in their models, or receive poor peer reviews than those analyses that found results that were close to the mean. The existence of substantial variability among analysis outcomes raises important questions about how ecologists and evolutionary biologists should interpret published results, and how they should conduct analyses in the future.</description><subject>Analytical heterogeneity</subject><subject>Animals</subject><subject>Athletic recruitment</subject><subject>Biological effects</subject><subject>Biological Evolution</subject><subject>Biology</subject><subject>Data analysis</subject><subject>Datasets</subject><subject>Decision making</subject><subject>Decisions</subject><subject>Developmental biology</subject><subject>Ecology</subject><subject>Ecology - methods</subject><subject>Error analysis</subject><subject>Eucalyptus</subject><subject>Eucalyptus - growth &amp; development</subject><subject>Evolution</subject><subject>Evolutionary biology</subject><subject>Grasses</subject><subject>Heterogeneity</subject><subject>Hypotheses</subject><subject>Many-analyst</subject><subject>Mathematical analysis</subject><subject>Mean</subject><subject>Medical imaging</subject><subject>Metascience</subject><subject>Methods</subject><subject>Neuroimaging</subject><subject>Outliers (statistics)</subject><subject>Parameter estimation</subject><subject>Passeriformes - physiology</subject><subject>Predictions</subject><subject>Professional football</subject><subject>Replication crisis</subject><subject>Reproducibility</subject><subject>Researchers</subject><subject>Reviews</subject><subject>Seedlings</subject><subject>Siblings</subject><subject>Social sciences</subject><subject>Statistical analysis</subject><subject>Statistics</subject><subject>Teams</subject><subject>Variability</subject><subject>Variables</subject><subject>Variation</subject><issn>1741-7007</issn><issn>1741-7007</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2025</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNpdkU1rFTEYhYMotlb_gAsJuHHR0bz5mMy4k2K1UHChrkMmeVNymTupyUy5119vOlOLuAj5eJ9zOOQQ8hrYe4Cu_VCA96AaxmVdwKA5PCGnoCU0mjH99J_zCXlRyo4xrrQWz8mJ6KtQazglh-92j9Tb2Z5TH0PAjNNM7WTHY5nLR3pnc7RzTBONE8U6dzMt8TcW6hekc9rQOTo7Uo8uloqWlXVpTDfHOvcU79K43JvYfKRDXAcvybNgx4KvHvYz8vPy84-Lr831ty9XF5-uGwe9gMYzLTW0PRc9ehAOHQcBHAcVtENQQtWr1cxjcE6oLjjRO2ZR2RYBvRNn5Grz9cnuzG2O-xrCJBvN-pDyjbG55h_ReFRdK8IwBC8lQOgQWY9CcSs7wTtZvd5tXrc5_VqwzGYfi8NxtBOmpRgBrRR912pR0bf_obu05PpXK6Ukb0F0leIb5XIqJWN4DAjM3Hdsto5N7disHZtDFb15sF6GPfpHyd9SxR8RzKMY</recordid><startdate>20250206</startdate><enddate>20250206</enddate><creator>Gould, Elliot</creator><creator>Fraser, Hannah S</creator><creator>Parker, Timothy H</creator><creator>Nakagawa, Shinichi</creator><creator>Griffith, Simon C</creator><creator>Vesk, Peter A</creator><creator>Fidler, Fiona</creator><creator>Hamilton, Daniel G</creator><creator>Abbey-Lee, Robin N</creator><creator>Abbott, Jessica K</creator><creator>Aguirre, Luis A</creator><creator>Alcaraz, Carles</creator><creator>Aloni, Irith</creator><creator>Altschul, Drew</creator><creator>Arekar, Kunal</creator><creator>Atkins, Jeff W</creator><creator>Atkinson, Joe</creator><creator>Baker, Christopher M</creator><creator>Barrett, Meghan</creator><creator>Bell, Kristian</creator><creator>Bello, Suleiman Kehinde</creator><creator>Beltrán, Iván</creator><creator>Berauer, Bernd J</creator><creator>Bertram, Michael Grant</creator><creator>Billman, Peter D</creator><creator>Blake, Charlie K</creator><creator>Blake, Shannon</creator><creator>Bliard, Louis</creator><creator>Bonisoli-Alquati, 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data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology</title><author>Gould, Elliot ; Fraser, Hannah S ; Parker, Timothy H ; Nakagawa, Shinichi ; Griffith, Simon C ; Vesk, Peter A ; Fidler, Fiona ; Hamilton, Daniel G ; Abbey-Lee, Robin N ; Abbott, Jessica K ; Aguirre, Luis A ; Alcaraz, Carles ; Aloni, Irith ; Altschul, Drew ; Arekar, Kunal ; Atkins, Jeff W ; Atkinson, Joe ; Baker, Christopher M ; Barrett, Meghan ; Bell, Kristian ; Bello, Suleiman Kehinde ; Beltrán, Iván ; Berauer, Bernd J ; Bertram, Michael Grant ; Billman, Peter D ; Blake, Charlie K ; Blake, Shannon ; Bliard, Louis ; Bonisoli-Alquati, Andrea ; Bonnet, Timothée ; Bordes, Camille Nina Marion ; Bose, Aneesh P H ; Botterill-James, Thomas ; Boyd, Melissa Anna ; Boyle, Sarah A ; Bradfer-Lawrence, Tom ; Bradham, Jennifer ; Brand, Jack A ; Brengdahl, Martin I ; Bulla, Martin ; Bussière, Luc ; Camerlenghi, Ettore ; Campbell, Sara E ; Campos, Leonardo L F ; Caravaggi, Anthony ; Cardoso, Pedro ; Carroll, Charles J W ; Catanach, Therese A ; Chen, Xuan ; Chik, Heung Ying Janet ; Choy, Emily Sarah ; Christie, Alec Philip ; Chuang, Angela ; Chunco, Amanda J ; Clark, Bethany L ; Contina, Andrea ; Covernton, Garth A ; Cox, Murray P ; Cressman, Kimberly A ; Crotti, Marco ; Crouch, Connor Davidson ; D'Amelio, Pietro B ; de Sousa, Alexandra Allison ; Döbert, Timm Fabian ; Dobler, Ralph ; Dobson, Adam J ; Doherty, Tim S ; Drobniak, Szymon Marian ; Duffy, Alexandra Grace ; Duncan, Alison B ; Dunn, Robert P ; Dunning, Jamie ; Dutta, Trishna ; Eberhart-Hertel, Luke ; Elmore, Jared Alan ; Elsherif, Mahmoud Medhat ; English, Holly M ; Ensminger, David C ; Ernst, Ulrich Rainer ; Ferguson, Stephen M ; Fernandez-Juricic, Esteban ; Ferreira-Arruda, Thalita ; Fieberg, John ; Finch, Elizabeth A ; Fiorenza, Evan A ; Fisher, David N ; Fontaine, Amélie ; Forstmeier, Wolfgang ; Fourcade, Yoan ; Frank, Graham S ; Freund, Cathryn A ; Fuentes-Lillo, Eduardo ; Gandy, Sara L ; Gannon, Dustin G ; García-Cervigón, Ana I ; Garretson, Alexis C ; Ge, Xuezhen ; Geary, William L ; Géron, Charly ; Gilles, Marc</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c1931-d0747169239ed13cec21312eb5f7ce1535131a70defcc358fc39c0ae5a6e1edc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2025</creationdate><topic>Analytical heterogeneity</topic><topic>Animals</topic><topic>Athletic recruitment</topic><topic>Biological effects</topic><topic>Biological Evolution</topic><topic>Biology</topic><topic>Data analysis</topic><topic>Datasets</topic><topic>Decision making</topic><topic>Decisions</topic><topic>Developmental biology</topic><topic>Ecology</topic><topic>Ecology - methods</topic><topic>Error analysis</topic><topic>Eucalyptus</topic><topic>Eucalyptus - growth &amp; development</topic><topic>Evolution</topic><topic>Evolutionary biology</topic><topic>Grasses</topic><topic>Heterogeneity</topic><topic>Hypotheses</topic><topic>Many-analyst</topic><topic>Mathematical analysis</topic><topic>Mean</topic><topic>Medical imaging</topic><topic>Metascience</topic><topic>Methods</topic><topic>Neuroimaging</topic><topic>Outliers (statistics)</topic><topic>Parameter estimation</topic><topic>Passeriformes - physiology</topic><topic>Predictions</topic><topic>Professional football</topic><topic>Replication crisis</topic><topic>Reproducibility</topic><topic>Researchers</topic><topic>Reviews</topic><topic>Seedlings</topic><topic>Siblings</topic><topic>Social sciences</topic><topic>Statistical analysis</topic><topic>Statistics</topic><topic>Teams</topic><topic>Variability</topic><topic>Variables</topic><topic>Variation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Gould, Elliot</creatorcontrib><creatorcontrib>Fraser, Hannah S</creatorcontrib><creatorcontrib>Parker, Timothy H</creatorcontrib><creatorcontrib>Nakagawa, Shinichi</creatorcontrib><creatorcontrib>Griffith, Simon C</creatorcontrib><creatorcontrib>Vesk, Peter A</creatorcontrib><creatorcontrib>Fidler, Fiona</creatorcontrib><creatorcontrib>Hamilton, Daniel G</creatorcontrib><creatorcontrib>Abbey-Lee, Robin N</creatorcontrib><creatorcontrib>Abbott, Jessica K</creatorcontrib><creatorcontrib>Aguirre, Luis A</creatorcontrib><creatorcontrib>Alcaraz, Carles</creatorcontrib><creatorcontrib>Aloni, Irith</creatorcontrib><creatorcontrib>Altschul, Drew</creatorcontrib><creatorcontrib>Arekar, Kunal</creatorcontrib><creatorcontrib>Atkins, Jeff W</creatorcontrib><creatorcontrib>Atkinson, Joe</creatorcontrib><creatorcontrib>Baker, Christopher M</creatorcontrib><creatorcontrib>Barrett, Meghan</creatorcontrib><creatorcontrib>Bell, Kristian</creatorcontrib><creatorcontrib>Bello, Suleiman Kehinde</creatorcontrib><creatorcontrib>Beltrán, Iván</creatorcontrib><creatorcontrib>Berauer, Bernd J</creatorcontrib><creatorcontrib>Bertram, Michael Grant</creatorcontrib><creatorcontrib>Billman, Peter D</creatorcontrib><creatorcontrib>Blake, Charlie K</creatorcontrib><creatorcontrib>Blake, Shannon</creatorcontrib><creatorcontrib>Bliard, Louis</creatorcontrib><creatorcontrib>Bonisoli-Alquati, Andrea</creatorcontrib><creatorcontrib>Bonnet, Timothée</creatorcontrib><creatorcontrib>Bordes, Camille Nina Marion</creatorcontrib><creatorcontrib>Bose, Aneesh P H</creatorcontrib><creatorcontrib>Botterill-James, Thomas</creatorcontrib><creatorcontrib>Boyd, Melissa Anna</creatorcontrib><creatorcontrib>Boyle, Sarah A</creatorcontrib><creatorcontrib>Bradfer-Lawrence, Tom</creatorcontrib><creatorcontrib>Bradham, Jennifer</creatorcontrib><creatorcontrib>Brand, Jack A</creatorcontrib><creatorcontrib>Brengdahl, Martin I</creatorcontrib><creatorcontrib>Bulla, Martin</creatorcontrib><creatorcontrib>Bussière, Luc</creatorcontrib><creatorcontrib>Camerlenghi, 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A</au><au>Fuentes-Lillo, Eduardo</au><au>Gandy, Sara L</au><au>Gannon, Dustin G</au><au>García-Cervigón, Ana I</au><au>Garretson, Alexis C</au><au>Ge, Xuezhen</au><au>Geary, William L</au><au>Géron, Charly</au><au>Gilles, Marc</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology</atitle><jtitle>BMC biology</jtitle><addtitle>BMC Biol</addtitle><date>2025-02-06</date><risdate>2025</risdate><volume>23</volume><issue>1</issue><spage>35</spage><epage>36</epage><pages>35-36</pages><artnum>35</artnum><issn>1741-7007</issn><eissn>1741-7007</eissn><abstract>Although variation in effect sizes and predicted values among studies of similar phenomena is inevitable, such variation far exceeds what might be produced by sampling error alone. One possible explanation for variation among results is differences among researchers in the decisions they make regarding statistical analyses. A growing array of studies has explored this analytical variability in different fields and has found substantial variability among results despite analysts having the same data and research question. Many of these studies have been in the social sciences, but one small "many analyst" study found similar variability in ecology. We expanded the scope of this prior work by implementing a large-scale empirical exploration of the variation in effect sizes and model predictions generated by the analytical decisions of different researchers in ecology and evolutionary biology. We used two unpublished datasets, one from evolutionary ecology (blue tit, Cyanistes caeruleus, to compare sibling number and nestling growth) and one from conservation ecology (Eucalyptus, to compare grass cover and tree seedling recruitment). The project leaders recruited 174 analyst teams, comprising 246 analysts, to investigate the answers to prespecified research questions. Analyses conducted by these teams yielded 141 usable effects (compatible with our meta-analyses and with all necessary information provided) for the blue tit dataset, and 85 usable effects for the Eucalyptus dataset. We found substantial heterogeneity among results for both datasets, although the patterns of variation differed between them. For the blue tit analyses, the average effect was convincingly negative, with less growth for nestlings living with more siblings, but there was near continuous variation in effect size from large negative effects to effects near zero, and even effects crossing the traditional threshold of statistical significance in the opposite direction. In contrast, the average relationship between grass cover and Eucalyptus seedling number was only slightly negative and not convincingly different from zero, and most effects ranged from weakly negative to weakly positive, with about a third of effects crossing the traditional threshold of significance in one direction or the other. However, there were also several striking outliers in the Eucalyptus dataset, with effects far from zero. For both datasets, we found substantial variation in the variable selection and random effects structures among analyses, as well as in the ratings of the analytical methods by peer reviewers, but we found no strong relationship between any of these and deviation from the meta-analytic mean. In other words, analyses with results that were far from the mean were no more or less likely to have dissimilar variable sets, use random effects in their models, or receive poor peer reviews than those analyses that found results that were close to the mean. The existence of substantial variability among analysis outcomes raises important questions about how ecologists and evolutionary biologists should interpret published results, and how they should conduct analyses in the future.</abstract><cop>England</cop><pub>BioMed 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source MEDLINE; DOAJ Directory of Open Access Journals; SpringerLink Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; PubMed Central Open Access; Springer Nature OA Free Journals
subjects Analytical heterogeneity
Animals
Athletic recruitment
Biological effects
Biological Evolution
Biology
Data analysis
Datasets
Decision making
Decisions
Developmental biology
Ecology
Ecology - methods
Error analysis
Eucalyptus
Eucalyptus - growth & development
Evolution
Evolutionary biology
Grasses
Heterogeneity
Hypotheses
Many-analyst
Mathematical analysis
Mean
Medical imaging
Metascience
Methods
Neuroimaging
Outliers (statistics)
Parameter estimation
Passeriformes - physiology
Predictions
Professional football
Replication crisis
Reproducibility
Researchers
Reviews
Seedlings
Siblings
Social sciences
Statistical analysis
Statistics
Teams
Variability
Variables
Variation
title Same data, different analysts: variation in effect sizes due to analytical decisions in ecology and evolutionary biology
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