Understanding the ecological versatility of Tetracladium species in temperate forest soils
Although Tetracladium species have traditionally been studied as aquatic saprotrophs, the growing number of metagenomic and metabarcoding reports detecting them in soil environments raises important questions about their ecological adaptability and versatility. We investigated the factors associated...
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| Veröffentlicht in: | Environmental microbiology 2024-11, Vol.26 (11), p.e70001-n/a |
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| creator | Lazar, Anna Phillips, Richard P. Kivlin, Stephanie Bending, Gary D. Mushinski, Ryan M. |
| description | Although Tetracladium species have traditionally been studied as aquatic saprotrophs, the growing number of metagenomic and metabarcoding reports detecting them in soil environments raises important questions about their ecological adaptability and versatility. We investigated the factors associated with the relative abundance, diversity and ecological dynamics of Tetracladium in temperate forest soils. Through amplicon sequencing of soil samples collected from 54 stands in six forest sites across the eastern United States, we identified 29 distinct Amplicon Sequence Variants (ASVs) representing Tetracladium, with large differences in relative abundance and small changes in ASV community composition among sites. Tetracladium richness was positively related to soil pH, soil temperature, total sulphur and silt content, and negatively related to plant litter quality, such as the lignin‐to‐nitrogen ratio and the lignocellulose index. Co‐occurrence network analysis indicated negative relationships between Tetracladium and other abundant fungal groups, including ectomycorrhizal and arbuscular mycorrhizal fungi. Collectively, our findings highlight the ecological significance of Tetracladium in temperate forest soils and emphasize the importance of site‐specific factors and microbial interactions in shaping their distribution patterns and ecological dynamics.
Tetracladium species, traditionally aquatic saprotrophs, are increasingly detected in soil environments, prompting questions about their ecological adaptability. Our study identified 29 distinct Amplicon Sequence Variants (ASVs) of Tetracladium spp. in temperate forest soils, with richness positively related to soil pH, temperature, sulphur and silt content, and negatively related to plant litter quality. Co‐occurrence network analysis revealed negative relationships between Tetracladium spp. and other abundant fungal groups, highlighting their ecological significance and the role of site‐specific factors and microbial interactions. |
| doi_str_mv | 10.1111/1462-2920.70001 |
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Tetracladium species, traditionally aquatic saprotrophs, are increasingly detected in soil environments, prompting questions about their ecological adaptability. Our study identified 29 distinct Amplicon Sequence Variants (ASVs) of Tetracladium spp. in temperate forest soils, with richness positively related to soil pH, temperature, sulphur and silt content, and negatively related to plant litter quality. Co‐occurrence network analysis revealed negative relationships between Tetracladium spp. and other abundant fungal groups, highlighting their ecological significance and the role of site‐specific factors and microbial interactions.</description><identifier>ISSN: 1462-2912</identifier><identifier>ISSN: 1462-2920</identifier><identifier>EISSN: 1462-2920</identifier><identifier>DOI: 10.1111/1462-2920.70001</identifier><identifier>PMID: 39496275</identifier><language>eng</language><publisher>Hoboken, USA: John Wiley & Sons, Inc</publisher><subject>Abundance ; Adaptability ; Aquatic environment ; Arbuscular mycorrhizas ; Biodiversity ; Community composition ; community structure ; Distribution patterns ; DNA barcoding ; ectomycorrhizae ; Ectomycorrhizas ; Forest soils ; Forests ; Fungi ; Lignocellulose ; Metagenomics ; Microorganisms ; Mycorrhizae - classification ; Mycorrhizae - genetics ; Network analysis ; plant litter ; Relative abundance ; saprotrophs ; Sequences ; silt fraction ; Soil ; Soil - chemistry ; Soil environment ; Soil investigations ; Soil Microbiology ; Soil microorganisms ; Soil pH ; Soil temperature ; species ; sulfur ; Sulphur ; Temperate forests ; Tetracladium ; Versatility ; vesicular arbuscular mycorrhizae</subject><ispartof>Environmental microbiology, 2024-11, Vol.26 (11), p.e70001-n/a</ispartof><rights>2024 The Author(s). published by John Wiley & Sons Ltd.</rights><rights>2024 The Author(s). Environmental Microbiology published by John Wiley & Sons Ltd.</rights><rights>2024. This article is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c3291-cda0fb71ec32ac5c5565bb56072bb4def424de1509c643d2c02167eb24202ef93</cites><orcidid>0000-0002-9533-1675</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2F1462-2920.70001$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2F1462-2920.70001$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39496275$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lazar, Anna</creatorcontrib><creatorcontrib>Phillips, Richard P.</creatorcontrib><creatorcontrib>Kivlin, Stephanie</creatorcontrib><creatorcontrib>Bending, Gary D.</creatorcontrib><creatorcontrib>Mushinski, Ryan M.</creatorcontrib><title>Understanding the ecological versatility of Tetracladium species in temperate forest soils</title><title>Environmental microbiology</title><addtitle>Environ Microbiol</addtitle><description>Although Tetracladium species have traditionally been studied as aquatic saprotrophs, the growing number of metagenomic and metabarcoding reports detecting them in soil environments raises important questions about their ecological adaptability and versatility. We investigated the factors associated with the relative abundance, diversity and ecological dynamics of Tetracladium in temperate forest soils. Through amplicon sequencing of soil samples collected from 54 stands in six forest sites across the eastern United States, we identified 29 distinct Amplicon Sequence Variants (ASVs) representing Tetracladium, with large differences in relative abundance and small changes in ASV community composition among sites. Tetracladium richness was positively related to soil pH, soil temperature, total sulphur and silt content, and negatively related to plant litter quality, such as the lignin‐to‐nitrogen ratio and the lignocellulose index. Co‐occurrence network analysis indicated negative relationships between Tetracladium and other abundant fungal groups, including ectomycorrhizal and arbuscular mycorrhizal fungi. Collectively, our findings highlight the ecological significance of Tetracladium in temperate forest soils and emphasize the importance of site‐specific factors and microbial interactions in shaping their distribution patterns and ecological dynamics.
Tetracladium species, traditionally aquatic saprotrophs, are increasingly detected in soil environments, prompting questions about their ecological adaptability. Our study identified 29 distinct Amplicon Sequence Variants (ASVs) of Tetracladium spp. in temperate forest soils, with richness positively related to soil pH, temperature, sulphur and silt content, and negatively related to plant litter quality. Co‐occurrence network analysis revealed negative relationships between Tetracladium spp. and other abundant fungal groups, highlighting their ecological significance and the role of site‐specific factors and microbial interactions.</description><subject>Abundance</subject><subject>Adaptability</subject><subject>Aquatic environment</subject><subject>Arbuscular mycorrhizas</subject><subject>Biodiversity</subject><subject>Community composition</subject><subject>community structure</subject><subject>Distribution patterns</subject><subject>DNA barcoding</subject><subject>ectomycorrhizae</subject><subject>Ectomycorrhizas</subject><subject>Forest soils</subject><subject>Forests</subject><subject>Fungi</subject><subject>Lignocellulose</subject><subject>Metagenomics</subject><subject>Microorganisms</subject><subject>Mycorrhizae - classification</subject><subject>Mycorrhizae - genetics</subject><subject>Network analysis</subject><subject>plant litter</subject><subject>Relative abundance</subject><subject>saprotrophs</subject><subject>Sequences</subject><subject>silt fraction</subject><subject>Soil</subject><subject>Soil - chemistry</subject><subject>Soil environment</subject><subject>Soil investigations</subject><subject>Soil Microbiology</subject><subject>Soil microorganisms</subject><subject>Soil pH</subject><subject>Soil temperature</subject><subject>species</subject><subject>sulfur</subject><subject>Sulphur</subject><subject>Temperate forests</subject><subject>Tetracladium</subject><subject>Versatility</subject><subject>vesicular arbuscular mycorrhizae</subject><issn>1462-2912</issn><issn>1462-2920</issn><issn>1462-2920</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><sourceid>EIF</sourceid><recordid>eNqNkc9PwyAUx4nRuDk9ezMkXrx0A1ra9GiWqUtmvGwXL4TS18lCy4RWs_9eZucOXpS8wIP34cuPL0LXlIxpaBOapCxiOSPjjBBCT9DwuHJ6zCkboAvvNwHI4oyco0GcJ3nKMj5Er6umBOdb2ZS6WeP2DTAoa-xaK2nwRyjJVhvd7rCt8BJaJ5WRpe5q7LegNHisG9xCvQUnW8CVdeBb7K02_hKdVdJ4uDqMI7R6mC2nT9Hi5XE-vV9EKg53i1QpSVVkFMJUKq44T3lR8JRkrCiSEqqEhZ5ykqs0iUumCKNpBgVLGGFQ5fEI3fW6W2ffu3C8qLVXYIxswHZexJQHCZbnyT9QloSI0zSgt7_Qje1cEx4SqJiF785yHqhJTylnvXdQia3TtXQ7QYnYOyT2Hoi9H-LbobDj5qDbFTWUR_7HkgDwHvjUBnZ_6YnZ87wX_gI34JoZ</recordid><startdate>202411</startdate><enddate>202411</enddate><creator>Lazar, Anna</creator><creator>Phillips, Richard P.</creator><creator>Kivlin, Stephanie</creator><creator>Bending, Gary D.</creator><creator>Mushinski, Ryan M.</creator><general>John Wiley & Sons, Inc</general><general>Wiley Subscription Services, Inc</general><scope>24P</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QH</scope><scope>7QL</scope><scope>7ST</scope><scope>7T7</scope><scope>7TN</scope><scope>7U9</scope><scope>7UA</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H94</scope><scope>H95</scope><scope>H97</scope><scope>L.G</scope><scope>M7N</scope><scope>P64</scope><scope>SOI</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><orcidid>https://orcid.org/0000-0002-9533-1675</orcidid></search><sort><creationdate>202411</creationdate><title>Understanding the ecological versatility of Tetracladium species in temperate forest soils</title><author>Lazar, Anna ; 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We investigated the factors associated with the relative abundance, diversity and ecological dynamics of Tetracladium in temperate forest soils. Through amplicon sequencing of soil samples collected from 54 stands in six forest sites across the eastern United States, we identified 29 distinct Amplicon Sequence Variants (ASVs) representing Tetracladium, with large differences in relative abundance and small changes in ASV community composition among sites. Tetracladium richness was positively related to soil pH, soil temperature, total sulphur and silt content, and negatively related to plant litter quality, such as the lignin‐to‐nitrogen ratio and the lignocellulose index. Co‐occurrence network analysis indicated negative relationships between Tetracladium and other abundant fungal groups, including ectomycorrhizal and arbuscular mycorrhizal fungi. Collectively, our findings highlight the ecological significance of Tetracladium in temperate forest soils and emphasize the importance of site‐specific factors and microbial interactions in shaping their distribution patterns and ecological dynamics.
Tetracladium species, traditionally aquatic saprotrophs, are increasingly detected in soil environments, prompting questions about their ecological adaptability. Our study identified 29 distinct Amplicon Sequence Variants (ASVs) of Tetracladium spp. in temperate forest soils, with richness positively related to soil pH, temperature, sulphur and silt content, and negatively related to plant litter quality. Co‐occurrence network analysis revealed negative relationships between Tetracladium spp. and other abundant fungal groups, highlighting their ecological significance and the role of site‐specific factors and microbial interactions.</abstract><cop>Hoboken, USA</cop><pub>John Wiley & Sons, Inc</pub><pmid>39496275</pmid><doi>10.1111/1462-2920.70001</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-9533-1675</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | Abundance Adaptability Aquatic environment Arbuscular mycorrhizas Biodiversity Community composition community structure Distribution patterns DNA barcoding ectomycorrhizae Ectomycorrhizas Forest soils Forests Fungi Lignocellulose Metagenomics Microorganisms Mycorrhizae - classification Mycorrhizae - genetics Network analysis plant litter Relative abundance saprotrophs Sequences silt fraction Soil Soil - chemistry Soil environment Soil investigations Soil Microbiology Soil microorganisms Soil pH Soil temperature species sulfur Sulphur Temperate forests Tetracladium Versatility vesicular arbuscular mycorrhizae |
| title | Understanding the ecological versatility of Tetracladium species in temperate forest soils |
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