New CYP154C4 from Streptomyces cavourensis YBQ59 performs regio- and stereo- selective 3β-hydroxlation of nootkatone

Nootkatone, a sesquiterpenoid widely used in the food and cosmetics industries, exhibits diverse biological activities and pharmaceutical prospects. Modification of nootkatone to create new derivatives with desirable activities has attracted significant attention. For this purpose, cytochrome P450 m...

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Veröffentlicht in:Archives of biochemistry and biophysics 2024-12, Vol.762, p.110192, Article 110192
Hauptverfasser: Ly, Thuy T.B., Thi Mai, Thu-Thuy, Raffaele, Alessandra, Urlacher, Vlada B., Nguyen, Thi Thao, Hutter, Michael C., Thi Vu, Hanh-Nguyen, Thuy Le, Duong Thi, Quach, Tung Ngoc, Phi, Quyet-Tien
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container_title Archives of biochemistry and biophysics
container_volume 762
creator Ly, Thuy T.B.
Thi Mai, Thu-Thuy
Raffaele, Alessandra
Urlacher, Vlada B.
Nguyen, Thi Thao
Hutter, Michael C.
Thi Vu, Hanh-Nguyen
Thuy Le, Duong Thi
Quach, Tung Ngoc
Phi, Quyet-Tien
description Nootkatone, a sesquiterpenoid widely used in the food and cosmetics industries, exhibits diverse biological activities and pharmaceutical prospects. Modification of nootkatone to create new derivatives with desirable activities has attracted significant attention. For this purpose, cytochrome P450 monooxygenases (P450 or CYP) are attractive candidates due to their ability to perform regio- and stereoselective hydroxylation at allylic C–H bonds. In this study, CYP154C4 from Streptomyces cavourensis YBQ59 was cloned and expressed in Escherichia coli. By screening 64 candidate substrates, this P450 was found to catalyze the regio- and stereoselective hydroxylation of nootkatone, yielding a single product, 3β-hydroxynootkatone. Using a whole-cell E. coli system expressing CYP154C4, supported by the heterologous redox partners YkuN from Bacillus subtilis and FdR from E. coli, 3β-hydroxynootkatone was produced on a preparative scale. The structure of this compound was determined by 1H NMR, 13C NMR, NOESY, HMBC, and HSQC. The kinetics of product formation were analyzed using HPLC, and the Km and Kcat values were calculated. Furthermore, structural insights into the selective hydroxylation of nootkatone were elucidated by molecular docking. 3β-Hydroxynootkatone, recently synthesized semi-synthetically from nootkatone, has been reported to exhibit a higher insecticidal activity than its parent compound. Additionally, the functionalization of nootkatone with N-acyl-2-aminothiazole at the C3 and C2 positions, yielding an α-glucosidase inhibitor, has also been previously described. Therefore, 3β-hydroxynootkatone has great potential for further research and for synthesizing new derivatives with valuable biological activities for agricultural and medicinal applications. [Display omitted] •New CYP154C4 from Streptomyces cavourensis YBQ59 was characterized.•CYP154C4 hydroxylates nootkatone to the single product 3β-hydroxynootkatone.•3β-Hydroxynootkatone has never been reported in any biocatalytic system so far.•3β-Hydroxynootkatone has great potential for further research.
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Modification of nootkatone to create new derivatives with desirable activities has attracted significant attention. For this purpose, cytochrome P450 monooxygenases (P450 or CYP) are attractive candidates due to their ability to perform regio- and stereoselective hydroxylation at allylic C–H bonds. In this study, CYP154C4 from Streptomyces cavourensis YBQ59 was cloned and expressed in Escherichia coli. By screening 64 candidate substrates, this P450 was found to catalyze the regio- and stereoselective hydroxylation of nootkatone, yielding a single product, 3β-hydroxynootkatone. Using a whole-cell E. coli system expressing CYP154C4, supported by the heterologous redox partners YkuN from Bacillus subtilis and FdR from E. coli, 3β-hydroxynootkatone was produced on a preparative scale. The structure of this compound was determined by 1H NMR, 13C NMR, NOESY, HMBC, and HSQC. The kinetics of product formation were analyzed using HPLC, and the Km and Kcat values were calculated. Furthermore, structural insights into the selective hydroxylation of nootkatone were elucidated by molecular docking. 3β-Hydroxynootkatone, recently synthesized semi-synthetically from nootkatone, has been reported to exhibit a higher insecticidal activity than its parent compound. Additionally, the functionalization of nootkatone with N-acyl-2-aminothiazole at the C3 and C2 positions, yielding an α-glucosidase inhibitor, has also been previously described. Therefore, 3β-hydroxynootkatone has great potential for further research and for synthesizing new derivatives with valuable biological activities for agricultural and medicinal applications. [Display omitted] •New CYP154C4 from Streptomyces cavourensis YBQ59 was characterized.•CYP154C4 hydroxylates nootkatone to the single product 3β-hydroxynootkatone.•3β-Hydroxynootkatone has never been reported in any biocatalytic system so far.•3β-Hydroxynootkatone has great potential for further research.</description><identifier>ISSN: 0003-9861</identifier><identifier>ISSN: 1096-0384</identifier><identifier>EISSN: 1096-0384</identifier><identifier>DOI: 10.1016/j.abb.2024.110192</identifier><identifier>PMID: 39481744</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>3β-hydroxynootkatone ; Bacillus subtilis ; Bacterial Proteins - chemistry ; Bacterial Proteins - genetics ; Bacterial Proteins - metabolism ; biophysics ; cosmetics ; CYP154C4 ; cytochrome P-450 ; Cytochrome P-450 Enzyme System - chemistry ; Cytochrome P-450 Enzyme System - metabolism ; Cytochrome P450 ; Escherichia coli ; Escherichia coli - genetics ; Escherichia coli - metabolism ; Homology modeling ; Hydroxylation ; insecticidal properties ; Kinetics ; Nootkatone ; Polycyclic Sesquiterpenes - chemistry ; Polycyclic Sesquiterpenes - metabolism ; Selective hydroxylation ; Sesquiterpenes - chemistry ; Sesquiterpenes - metabolism ; Stereoisomerism ; stereoselectivity ; Streptomyces - enzymology ; Streptomyces cavourensis ; Substrate Specificity</subject><ispartof>Archives of biochemistry and biophysics, 2024-12, Vol.762, p.110192, Article 110192</ispartof><rights>2024 Elsevier Inc.</rights><rights>Copyright © 2024 Elsevier Inc. 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Modification of nootkatone to create new derivatives with desirable activities has attracted significant attention. For this purpose, cytochrome P450 monooxygenases (P450 or CYP) are attractive candidates due to their ability to perform regio- and stereoselective hydroxylation at allylic C–H bonds. In this study, CYP154C4 from Streptomyces cavourensis YBQ59 was cloned and expressed in Escherichia coli. By screening 64 candidate substrates, this P450 was found to catalyze the regio- and stereoselective hydroxylation of nootkatone, yielding a single product, 3β-hydroxynootkatone. Using a whole-cell E. coli system expressing CYP154C4, supported by the heterologous redox partners YkuN from Bacillus subtilis and FdR from E. coli, 3β-hydroxynootkatone was produced on a preparative scale. The structure of this compound was determined by 1H NMR, 13C NMR, NOESY, HMBC, and HSQC. The kinetics of product formation were analyzed using HPLC, and the Km and Kcat values were calculated. Furthermore, structural insights into the selective hydroxylation of nootkatone were elucidated by molecular docking. 3β-Hydroxynootkatone, recently synthesized semi-synthetically from nootkatone, has been reported to exhibit a higher insecticidal activity than its parent compound. Additionally, the functionalization of nootkatone with N-acyl-2-aminothiazole at the C3 and C2 positions, yielding an α-glucosidase inhibitor, has also been previously described. Therefore, 3β-hydroxynootkatone has great potential for further research and for synthesizing new derivatives with valuable biological activities for agricultural and medicinal applications. [Display omitted] •New CYP154C4 from Streptomyces cavourensis YBQ59 was characterized.•CYP154C4 hydroxylates nootkatone to the single product 3β-hydroxynootkatone.•3β-Hydroxynootkatone has never been reported in any biocatalytic system so far.•3β-Hydroxynootkatone has great potential for further research.</description><subject>3β-hydroxynootkatone</subject><subject>Bacillus subtilis</subject><subject>Bacterial Proteins - chemistry</subject><subject>Bacterial Proteins - genetics</subject><subject>Bacterial Proteins - metabolism</subject><subject>biophysics</subject><subject>cosmetics</subject><subject>CYP154C4</subject><subject>cytochrome P-450</subject><subject>Cytochrome P-450 Enzyme System - chemistry</subject><subject>Cytochrome P-450 Enzyme System - metabolism</subject><subject>Cytochrome P450</subject><subject>Escherichia coli</subject><subject>Escherichia coli - genetics</subject><subject>Escherichia coli - metabolism</subject><subject>Homology modeling</subject><subject>Hydroxylation</subject><subject>insecticidal properties</subject><subject>Kinetics</subject><subject>Nootkatone</subject><subject>Polycyclic Sesquiterpenes - chemistry</subject><subject>Polycyclic Sesquiterpenes - metabolism</subject><subject>Selective hydroxylation</subject><subject>Sesquiterpenes - chemistry</subject><subject>Sesquiterpenes - metabolism</subject><subject>Stereoisomerism</subject><subject>stereoselectivity</subject><subject>Streptomyces - enzymology</subject><subject>Streptomyces cavourensis</subject><subject>Substrate Specificity</subject><issn>0003-9861</issn><issn>1096-0384</issn><issn>1096-0384</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU2O1DAQhS0EYnoaDsAGeckmjcs_SSxW0AIGacSPgMWsLCcug5sk7rGThr4WB-FMeNQDS8SqSqVXr_TqI-QRsA0wqJ_uNrbrNpxxuYEy0PwOWQHTdcVEK--SFWNMVLqt4Yyc57xjDEDW_D45E1q20Ei5Istb_E63V-9Bya2kPsWRfpwT7uc4HnvMtLeHuCSccsj06sUHpekek49pzDThlxAraidH84wJS59xwH4OB6Ti18_q69Gl-GOwc4gTjZ5OMc7f7BwnfEDueTtkfHhb1-Tzq5efthfV5bvXb7bPL6seWiErpZhnvWvBaeig65T3TnRK8VoKLoXrmlo7ZrlsOGuV0l4xcCW_1oBCWibW5MnJd5_i9YJ5NmPIPQ6DnTAu2YgSG1reNuI_pFywhstyd03gJO1TzDmhN_sURpuOBpi5AWN2poAxN2DMCUzZeXxrv3Qjur8bf0gUwbOTAMs_DgGTyX3AqUcXUvmpcTH8w_43AT6chA</recordid><startdate>202412</startdate><enddate>202412</enddate><creator>Ly, Thuy T.B.</creator><creator>Thi Mai, Thu-Thuy</creator><creator>Raffaele, Alessandra</creator><creator>Urlacher, Vlada B.</creator><creator>Nguyen, Thi Thao</creator><creator>Hutter, Michael C.</creator><creator>Thi Vu, Hanh-Nguyen</creator><creator>Thuy Le, Duong Thi</creator><creator>Quach, Tung Ngoc</creator><creator>Phi, Quyet-Tien</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><orcidid>https://orcid.org/0000-0001-5984-7503</orcidid></search><sort><creationdate>202412</creationdate><title>New CYP154C4 from Streptomyces cavourensis YBQ59 performs regio- and stereo- selective 3β-hydroxlation of nootkatone</title><author>Ly, Thuy T.B. ; Thi Mai, Thu-Thuy ; Raffaele, Alessandra ; Urlacher, Vlada B. ; Nguyen, Thi Thao ; Hutter, Michael C. ; Thi Vu, Hanh-Nguyen ; Thuy Le, Duong Thi ; Quach, Tung Ngoc ; Phi, Quyet-Tien</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c1834-550f0cd81d91b1bb5ffd3b552643243db769d0a247208559f501d096991e34a03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>3β-hydroxynootkatone</topic><topic>Bacillus subtilis</topic><topic>Bacterial Proteins - chemistry</topic><topic>Bacterial Proteins - genetics</topic><topic>Bacterial Proteins - metabolism</topic><topic>biophysics</topic><topic>cosmetics</topic><topic>CYP154C4</topic><topic>cytochrome P-450</topic><topic>Cytochrome P-450 Enzyme System - chemistry</topic><topic>Cytochrome P-450 Enzyme System - metabolism</topic><topic>Cytochrome P450</topic><topic>Escherichia coli</topic><topic>Escherichia coli - genetics</topic><topic>Escherichia coli - metabolism</topic><topic>Homology modeling</topic><topic>Hydroxylation</topic><topic>insecticidal properties</topic><topic>Kinetics</topic><topic>Nootkatone</topic><topic>Polycyclic Sesquiterpenes - chemistry</topic><topic>Polycyclic Sesquiterpenes - metabolism</topic><topic>Selective hydroxylation</topic><topic>Sesquiterpenes - chemistry</topic><topic>Sesquiterpenes - metabolism</topic><topic>Stereoisomerism</topic><topic>stereoselectivity</topic><topic>Streptomyces - enzymology</topic><topic>Streptomyces cavourensis</topic><topic>Substrate Specificity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ly, Thuy T.B.</creatorcontrib><creatorcontrib>Thi Mai, Thu-Thuy</creatorcontrib><creatorcontrib>Raffaele, Alessandra</creatorcontrib><creatorcontrib>Urlacher, Vlada B.</creatorcontrib><creatorcontrib>Nguyen, Thi Thao</creatorcontrib><creatorcontrib>Hutter, Michael C.</creatorcontrib><creatorcontrib>Thi Vu, Hanh-Nguyen</creatorcontrib><creatorcontrib>Thuy Le, Duong Thi</creatorcontrib><creatorcontrib>Quach, Tung Ngoc</creatorcontrib><creatorcontrib>Phi, Quyet-Tien</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Archives of biochemistry and biophysics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ly, Thuy T.B.</au><au>Thi Mai, Thu-Thuy</au><au>Raffaele, Alessandra</au><au>Urlacher, Vlada B.</au><au>Nguyen, Thi Thao</au><au>Hutter, Michael C.</au><au>Thi Vu, Hanh-Nguyen</au><au>Thuy Le, Duong Thi</au><au>Quach, Tung Ngoc</au><au>Phi, Quyet-Tien</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>New CYP154C4 from Streptomyces cavourensis YBQ59 performs regio- and stereo- selective 3β-hydroxlation of nootkatone</atitle><jtitle>Archives of biochemistry and biophysics</jtitle><addtitle>Arch Biochem Biophys</addtitle><date>2024-12</date><risdate>2024</risdate><volume>762</volume><spage>110192</spage><pages>110192-</pages><artnum>110192</artnum><issn>0003-9861</issn><issn>1096-0384</issn><eissn>1096-0384</eissn><abstract>Nootkatone, a sesquiterpenoid widely used in the food and cosmetics industries, exhibits diverse biological activities and pharmaceutical prospects. Modification of nootkatone to create new derivatives with desirable activities has attracted significant attention. For this purpose, cytochrome P450 monooxygenases (P450 or CYP) are attractive candidates due to their ability to perform regio- and stereoselective hydroxylation at allylic C–H bonds. In this study, CYP154C4 from Streptomyces cavourensis YBQ59 was cloned and expressed in Escherichia coli. By screening 64 candidate substrates, this P450 was found to catalyze the regio- and stereoselective hydroxylation of nootkatone, yielding a single product, 3β-hydroxynootkatone. Using a whole-cell E. coli system expressing CYP154C4, supported by the heterologous redox partners YkuN from Bacillus subtilis and FdR from E. coli, 3β-hydroxynootkatone was produced on a preparative scale. The structure of this compound was determined by 1H NMR, 13C NMR, NOESY, HMBC, and HSQC. The kinetics of product formation were analyzed using HPLC, and the Km and Kcat values were calculated. Furthermore, structural insights into the selective hydroxylation of nootkatone were elucidated by molecular docking. 3β-Hydroxynootkatone, recently synthesized semi-synthetically from nootkatone, has been reported to exhibit a higher insecticidal activity than its parent compound. Additionally, the functionalization of nootkatone with N-acyl-2-aminothiazole at the C3 and C2 positions, yielding an α-glucosidase inhibitor, has also been previously described. Therefore, 3β-hydroxynootkatone has great potential for further research and for synthesizing new derivatives with valuable biological activities for agricultural and medicinal applications. [Display omitted] •New CYP154C4 from Streptomyces cavourensis YBQ59 was characterized.•CYP154C4 hydroxylates nootkatone to the single product 3β-hydroxynootkatone.•3β-Hydroxynootkatone has never been reported in any biocatalytic system so far.•3β-Hydroxynootkatone has great potential for further research.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>39481744</pmid><doi>10.1016/j.abb.2024.110192</doi><orcidid>https://orcid.org/0000-0001-5984-7503</orcidid></addata></record>
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subjects 3β-hydroxynootkatone
Bacillus subtilis
Bacterial Proteins - chemistry
Bacterial Proteins - genetics
Bacterial Proteins - metabolism
biophysics
cosmetics
CYP154C4
cytochrome P-450
Cytochrome P-450 Enzyme System - chemistry
Cytochrome P-450 Enzyme System - metabolism
Cytochrome P450
Escherichia coli
Escherichia coli - genetics
Escherichia coli - metabolism
Homology modeling
Hydroxylation
insecticidal properties
Kinetics
Nootkatone
Polycyclic Sesquiterpenes - chemistry
Polycyclic Sesquiterpenes - metabolism
Selective hydroxylation
Sesquiterpenes - chemistry
Sesquiterpenes - metabolism
Stereoisomerism
stereoselectivity
Streptomyces - enzymology
Streptomyces cavourensis
Substrate Specificity
title New CYP154C4 from Streptomyces cavourensis YBQ59 performs regio- and stereo- selective 3β-hydroxlation of nootkatone
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