Mesoscale heterogeneity is a critical determinant for spiral pattern formation in developing social amoeba
Heterogeneity is a critical determinant for multicellular pattern formation. Although the importance of microscale and macroscale heterogeneity at the single-cell and whole-system levels, respectively, has been well accepted, the presence and functions of mesoscale heterogeneity, such as cell cluste...
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creator | Kakizuka, Taishi Nakaoka, Hidenori Hara, Yusuke Ichiraku, Aya Arai, Yoshiyuki Itoga, Hiroya Onami, Shuichi Ichimura, Taro Nagai, Takeharu Horikawa, Kazuki |
description | Heterogeneity is a critical determinant for multicellular pattern formation. Although the importance of microscale and macroscale heterogeneity at the single-cell and whole-system levels, respectively, has been well accepted, the presence and functions of mesoscale heterogeneity, such as cell clusters with distinct properties, have been poorly recognized. We investigated the biological importance of mesoscale heterogeneity in signal-relaying abilities (excitability) in the self-organization of spiral waves of intercellular communications by studying the self-organized pattern formation in a population of
Dictyostelium discoideum
cells, a classical signal-relaying system model. By utilizing pulse-count analysis to evaluate cellular excitability, we successfully visualized the development of mesoscale heterogeneity in excitability, whose spatial scale was comparably large to that of the traveling waves of intercellular communication. Together with perturbation experiments, our detailed analysis of the structural change in mesoscale heterogeneity and associated wave dynamics demonstrated the functional importance of mesoscale heterogeneity in generating the spiral wave pattern, whose experimental observations were first realized. We propose that mesoscale heterogeneity, in addition to microscale and macroscale heterogeneities, is a critical determinant of diverse multicellular pattern formations. |
doi_str_mv | 10.1038/s41598-025-85759-9 |
format | Article |
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Dictyostelium discoideum
cells, a classical signal-relaying system model. By utilizing pulse-count analysis to evaluate cellular excitability, we successfully visualized the development of mesoscale heterogeneity in excitability, whose spatial scale was comparably large to that of the traveling waves of intercellular communication. Together with perturbation experiments, our detailed analysis of the structural change in mesoscale heterogeneity and associated wave dynamics demonstrated the functional importance of mesoscale heterogeneity in generating the spiral wave pattern, whose experimental observations were first realized. We propose that mesoscale heterogeneity, in addition to microscale and macroscale heterogeneities, is a critical determinant of diverse multicellular pattern formations.</description><identifier>ISSN: 2045-2322</identifier><identifier>EISSN: 2045-2322</identifier><identifier>DOI: 10.1038/s41598-025-85759-9</identifier><identifier>PMID: 39789232</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/136/1660 ; 631/136/756 ; Cell Communication ; Dictyostelium - growth & development ; Dictyostelium - physiology ; Excitability ; Gene expression ; Heterogeneity ; Humanities and Social Sciences ; Investigations ; Models, Biological ; multidisciplinary ; Pattern formation ; Predation ; Propagation ; Science ; Science (multidisciplinary) ; Signal Transduction ; Structure-function relationships</subject><ispartof>Scientific reports, 2025-01, Vol.15 (1), p.1422-12, Article 1422</ispartof><rights>The Author(s) 2025</rights><rights>2025. The Author(s).</rights><rights>Copyright Nature Publishing Group 2025</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c2379-ddd6ac96937fdf191fccbd6556c9b383d5ea38903f9c6a10a27c9cd24cf2baac3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1038/s41598-025-85759-9$$EPDF$$P50$$Gspringer$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://doi.org/10.1038/s41598-025-85759-9$$EHTML$$P50$$Gspringer$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,860,2096,27901,27902,41096,42165,51551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39789232$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kakizuka, Taishi</creatorcontrib><creatorcontrib>Nakaoka, Hidenori</creatorcontrib><creatorcontrib>Hara, Yusuke</creatorcontrib><creatorcontrib>Ichiraku, Aya</creatorcontrib><creatorcontrib>Arai, Yoshiyuki</creatorcontrib><creatorcontrib>Itoga, Hiroya</creatorcontrib><creatorcontrib>Onami, Shuichi</creatorcontrib><creatorcontrib>Ichimura, Taro</creatorcontrib><creatorcontrib>Nagai, Takeharu</creatorcontrib><creatorcontrib>Horikawa, Kazuki</creatorcontrib><title>Mesoscale heterogeneity is a critical determinant for spiral pattern formation in developing social amoeba</title><title>Scientific reports</title><addtitle>Sci Rep</addtitle><addtitle>Sci Rep</addtitle><description>Heterogeneity is a critical determinant for multicellular pattern formation. Although the importance of microscale and macroscale heterogeneity at the single-cell and whole-system levels, respectively, has been well accepted, the presence and functions of mesoscale heterogeneity, such as cell clusters with distinct properties, have been poorly recognized. We investigated the biological importance of mesoscale heterogeneity in signal-relaying abilities (excitability) in the self-organization of spiral waves of intercellular communications by studying the self-organized pattern formation in a population of
Dictyostelium discoideum
cells, a classical signal-relaying system model. By utilizing pulse-count analysis to evaluate cellular excitability, we successfully visualized the development of mesoscale heterogeneity in excitability, whose spatial scale was comparably large to that of the traveling waves of intercellular communication. Together with perturbation experiments, our detailed analysis of the structural change in mesoscale heterogeneity and associated wave dynamics demonstrated the functional importance of mesoscale heterogeneity in generating the spiral wave pattern, whose experimental observations were first realized. We propose that mesoscale heterogeneity, in addition to microscale and macroscale heterogeneities, is a critical determinant of diverse multicellular pattern formations.</description><subject>631/136/1660</subject><subject>631/136/756</subject><subject>Cell Communication</subject><subject>Dictyostelium - growth & development</subject><subject>Dictyostelium - physiology</subject><subject>Excitability</subject><subject>Gene expression</subject><subject>Heterogeneity</subject><subject>Humanities and Social Sciences</subject><subject>Investigations</subject><subject>Models, Biological</subject><subject>multidisciplinary</subject><subject>Pattern formation</subject><subject>Predation</subject><subject>Propagation</subject><subject>Science</subject><subject>Science (multidisciplinary)</subject><subject>Signal Transduction</subject><subject>Structure-function relationships</subject><issn>2045-2322</issn><issn>2045-2322</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2025</creationdate><recordtype>article</recordtype><sourceid>C6C</sourceid><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><sourceid>DOA</sourceid><recordid>eNp9kUFv1DAQhS0EotXSP8ABReLCJRDbceI5oopCpSIucLYm9njxKomDnUXqv8e7KQVxwBdbb7559vgx9pI3b3kj9bvccgW6boSqteoV1PCEXYqmVbWQQjz963zBrnI-NGUpAS2H5-xCQq-h1C7Z4TPlmC2OVH2nlVLc00xhva9CrrCyKayhFCt3qk1hxnmtfExVXkIq8oJr0eeTNOEa4lyFubA_aYxLmPdVjjYUDKdIA75gzzyOma4e9h37dvPh6_Wn-u7Lx9vr93e1FbKH2jnXoYUOZO-d58C9tYPrlOosDFJLpwilhkZ6sB3yBkVvwTrRWi8GRCt37HbzdREPZklhwnRvIgZzFmLaG0xlrJEMUg9aeS0HZVuiFnTjFfWCt95Bz3XxerN5LSn-OFJezRSypXHEmeIxG8mVBK7bM_r6H_QQj2kuk54pKbUoX75jYqNsijkn8o8P5I05BWu2YE0J1pyDNVCaXj1YH4eJ3GPL7xgLIDcgl9K8p_Tn7v_Y_gIdvK91</recordid><startdate>20250109</startdate><enddate>20250109</enddate><creator>Kakizuka, Taishi</creator><creator>Nakaoka, Hidenori</creator><creator>Hara, Yusuke</creator><creator>Ichiraku, Aya</creator><creator>Arai, Yoshiyuki</creator><creator>Itoga, Hiroya</creator><creator>Onami, Shuichi</creator><creator>Ichimura, Taro</creator><creator>Nagai, Takeharu</creator><creator>Horikawa, Kazuki</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><general>Nature Portfolio</general><scope>C6C</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>DOA</scope></search><sort><creationdate>20250109</creationdate><title>Mesoscale heterogeneity is a critical determinant for spiral pattern formation in developing social amoeba</title><author>Kakizuka, Taishi ; 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Although the importance of microscale and macroscale heterogeneity at the single-cell and whole-system levels, respectively, has been well accepted, the presence and functions of mesoscale heterogeneity, such as cell clusters with distinct properties, have been poorly recognized. We investigated the biological importance of mesoscale heterogeneity in signal-relaying abilities (excitability) in the self-organization of spiral waves of intercellular communications by studying the self-organized pattern formation in a population of
Dictyostelium discoideum
cells, a classical signal-relaying system model. By utilizing pulse-count analysis to evaluate cellular excitability, we successfully visualized the development of mesoscale heterogeneity in excitability, whose spatial scale was comparably large to that of the traveling waves of intercellular communication. Together with perturbation experiments, our detailed analysis of the structural change in mesoscale heterogeneity and associated wave dynamics demonstrated the functional importance of mesoscale heterogeneity in generating the spiral wave pattern, whose experimental observations were first realized. We propose that mesoscale heterogeneity, in addition to microscale and macroscale heterogeneities, is a critical determinant of diverse multicellular pattern formations.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>39789232</pmid><doi>10.1038/s41598-025-85759-9</doi><tpages>12</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 631/136/1660 631/136/756 Cell Communication Dictyostelium - growth & development Dictyostelium - physiology Excitability Gene expression Heterogeneity Humanities and Social Sciences Investigations Models, Biological multidisciplinary Pattern formation Predation Propagation Science Science (multidisciplinary) Signal Transduction Structure-function relationships |
title | Mesoscale heterogeneity is a critical determinant for spiral pattern formation in developing social amoeba |
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