Characterization of Sclerotium rolfsii causing foot rot: a severe threat of betel vine cultivation in Bangladesh
The development of the foot rot disease caused by the fungus Sclerotium rolfsii is one of the primary variables endangering betel vine production in Bangladesh. Consequently, with the ultimate objective of finding efficient preventive and control strategies for this infamous phytopathogen, the curre...
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| creator | Tanjila, Nargis Islam, Shaikhul Akhter, Md. Shamim Hossain, Md. Monzur Alam, Mohammad Shahidul Begum, Ferdousi |
| description | The development of the foot rot disease caused by the fungus
Sclerotium rolfsii
is one of the primary variables endangering betel vine production in Bangladesh. Consequently, with the ultimate objective of finding efficient preventive and control strategies for this infamous phytopathogen, the current study was undertaken for comprehensive population structure analysis, exploration of physiological features and incidence patterns of pathogenic
S. rolfsii
isolates. We discovered 22
S. rolfsii
isolates from nine northern districts of Bangladesh
.
Mohanpur (51.90%), Bagmara (54.09%), and Durgapur (49.45%) upazilas in the Rajshahi district had the more severe occurrences of foot rot disease, while Chapainawabganj (18.89%) had the least number of cases. The isolates differed substantially in terms of morphology and growth rate. By employing the UPGMA algorithm to analyze the combined morphological data from 22
S. rolfsii
isolates, these isolates were divided into six different groups with a 62% similarity level. Somatic incompatibility was also found in some isolates. The RAPD-4 primer confirmed 100% polymorphism among these isolates, and these genetic variations were further validated by molecular analysis. The results of the morphological and molecular analysis revealed that there was significant variation among the
S. rolfsii
isolates. Finally, a comprehensive characterization of
S. rolfsii
would allow for a suitable management strategy for betel vine’s deadly foot rot disease. |
| doi_str_mv | 10.1007/s13205-023-03890-8 |
| format | Article |
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Sclerotium rolfsii
is one of the primary variables endangering betel vine production in Bangladesh. Consequently, with the ultimate objective of finding efficient preventive and control strategies for this infamous phytopathogen, the current study was undertaken for comprehensive population structure analysis, exploration of physiological features and incidence patterns of pathogenic
S. rolfsii
isolates. We discovered 22
S. rolfsii
isolates from nine northern districts of Bangladesh
.
Mohanpur (51.90%), Bagmara (54.09%), and Durgapur (49.45%) upazilas in the Rajshahi district had the more severe occurrences of foot rot disease, while Chapainawabganj (18.89%) had the least number of cases. The isolates differed substantially in terms of morphology and growth rate. By employing the UPGMA algorithm to analyze the combined morphological data from 22
S. rolfsii
isolates, these isolates were divided into six different groups with a 62% similarity level. Somatic incompatibility was also found in some isolates. The RAPD-4 primer confirmed 100% polymorphism among these isolates, and these genetic variations were further validated by molecular analysis. The results of the morphological and molecular analysis revealed that there was significant variation among the
S. rolfsii
isolates. Finally, a comprehensive characterization of
S. rolfsii
would allow for a suitable management strategy for betel vine’s deadly foot rot disease.</description><identifier>ISSN: 2190-572X</identifier><identifier>ISSN: 2190-5738</identifier><identifier>EISSN: 2190-5738</identifier><identifier>DOI: 10.1007/s13205-023-03890-8</identifier><identifier>PMID: 38298554</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Agriculture ; Algorithms ; Athelia rolfsii ; Bangladesh ; betel ; Bioinformatics ; Biomaterials ; Biotechnology ; Cancer Research ; Chemistry ; Chemistry and Materials Science ; Foot rot ; fungi ; Genetic diversity ; Incompatibility ; Morphology ; Original ; Original Article ; plant pathogens ; Polymorphism ; Population structure ; Sclerotium rolfsii ; somatic incompatibility ; Stem Cells ; Structural analysis ; vines</subject><ispartof>3 Biotech, 2024-02, Vol.14 (2), p.58-58, Article 58</ispartof><rights>King Abdulaziz City for Science and Technology 2024. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c415t-a810cd18aa86d8f984056f9516ccf32263188431b80ab3c771d92a6d89df67913</cites><orcidid>0000-0003-1632-8783</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10825092/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10825092/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,41464,42533,51294,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38298554$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tanjila, Nargis</creatorcontrib><creatorcontrib>Islam, Shaikhul</creatorcontrib><creatorcontrib>Akhter, Md. Shamim</creatorcontrib><creatorcontrib>Hossain, Md. Monzur</creatorcontrib><creatorcontrib>Alam, Mohammad Shahidul</creatorcontrib><creatorcontrib>Begum, Ferdousi</creatorcontrib><title>Characterization of Sclerotium rolfsii causing foot rot: a severe threat of betel vine cultivation in Bangladesh</title><title>3 Biotech</title><addtitle>3 Biotech</addtitle><addtitle>3 Biotech</addtitle><description>The development of the foot rot disease caused by the fungus
Sclerotium rolfsii
is one of the primary variables endangering betel vine production in Bangladesh. Consequently, with the ultimate objective of finding efficient preventive and control strategies for this infamous phytopathogen, the current study was undertaken for comprehensive population structure analysis, exploration of physiological features and incidence patterns of pathogenic
S. rolfsii
isolates. We discovered 22
S. rolfsii
isolates from nine northern districts of Bangladesh
.
Mohanpur (51.90%), Bagmara (54.09%), and Durgapur (49.45%) upazilas in the Rajshahi district had the more severe occurrences of foot rot disease, while Chapainawabganj (18.89%) had the least number of cases. The isolates differed substantially in terms of morphology and growth rate. By employing the UPGMA algorithm to analyze the combined morphological data from 22
S. rolfsii
isolates, these isolates were divided into six different groups with a 62% similarity level. Somatic incompatibility was also found in some isolates. The RAPD-4 primer confirmed 100% polymorphism among these isolates, and these genetic variations were further validated by molecular analysis. The results of the morphological and molecular analysis revealed that there was significant variation among the
S. rolfsii
isolates. Finally, a comprehensive characterization of
S. rolfsii
would allow for a suitable management strategy for betel vine’s deadly foot rot disease.</description><subject>Agriculture</subject><subject>Algorithms</subject><subject>Athelia rolfsii</subject><subject>Bangladesh</subject><subject>betel</subject><subject>Bioinformatics</subject><subject>Biomaterials</subject><subject>Biotechnology</subject><subject>Cancer Research</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Foot rot</subject><subject>fungi</subject><subject>Genetic diversity</subject><subject>Incompatibility</subject><subject>Morphology</subject><subject>Original</subject><subject>Original Article</subject><subject>plant pathogens</subject><subject>Polymorphism</subject><subject>Population structure</subject><subject>Sclerotium rolfsii</subject><subject>somatic incompatibility</subject><subject>Stem Cells</subject><subject>Structural analysis</subject><subject>vines</subject><issn>2190-572X</issn><issn>2190-5738</issn><issn>2190-5738</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNqFkc2OFCEUhYnROJNxXsCFIXHjppQLRRW4MU5HZ0wmcaEm7ghNQTcTGlqgOtGnl7HG9mehbLjhfudc4CD0GMhzIGR8UYBRwjtCWUeYkKQT99AphVbwkYn7x5p-PkHnpdyQtjhwCeQhOmGCSsF5f4r2q63O2lSb_TddfYo4OfzBBJtT9fMO5xRc8R4bPRcfN9ilVNthfYk1LvZgs8V1m62ut7q1rTbgg48WmzlUf1gcfcQXOm6CnmzZPkIPnA7Fnt_tZ-jT2zcfV1fd9fvLd6vX153pgddOCyBmAqG1GCbhpOgJH5zkMBjjGKUDAyF6BmtB9JqZcYRJUt1QOblhlMDO0KvFdz-vd3YyNtasg9pnv9P5q0raqz870W_VJh0UEEE5kbQ5PLtzyOnLbEtVO1-MDUFHm-aiGHA29JL28F-USgoAw0h4Q5_-hd6kOcf2FY0CKcjY86FRdKFMTqVk644XB6Ju81dL_qrlr37kr0QTPfn9yUfJz7QbwBagtFbc2Pxr9j9svwPFULus</recordid><startdate>20240201</startdate><enddate>20240201</enddate><creator>Tanjila, Nargis</creator><creator>Islam, Shaikhul</creator><creator>Akhter, Md. Shamim</creator><creator>Hossain, Md. Monzur</creator><creator>Alam, Mohammad Shahidul</creator><creator>Begum, Ferdousi</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0003-1632-8783</orcidid></search><sort><creationdate>20240201</creationdate><title>Characterization of Sclerotium rolfsii causing foot rot: a severe threat of betel vine cultivation in Bangladesh</title><author>Tanjila, Nargis ; Islam, Shaikhul ; Akhter, Md. Shamim ; Hossain, Md. Monzur ; Alam, Mohammad Shahidul ; Begum, Ferdousi</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c415t-a810cd18aa86d8f984056f9516ccf32263188431b80ab3c771d92a6d89df67913</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Agriculture</topic><topic>Algorithms</topic><topic>Athelia rolfsii</topic><topic>Bangladesh</topic><topic>betel</topic><topic>Bioinformatics</topic><topic>Biomaterials</topic><topic>Biotechnology</topic><topic>Cancer Research</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>Foot rot</topic><topic>fungi</topic><topic>Genetic diversity</topic><topic>Incompatibility</topic><topic>Morphology</topic><topic>Original</topic><topic>Original Article</topic><topic>plant pathogens</topic><topic>Polymorphism</topic><topic>Population structure</topic><topic>Sclerotium rolfsii</topic><topic>somatic incompatibility</topic><topic>Stem Cells</topic><topic>Structural analysis</topic><topic>vines</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tanjila, Nargis</creatorcontrib><creatorcontrib>Islam, Shaikhul</creatorcontrib><creatorcontrib>Akhter, Md. 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Sclerotium rolfsii
is one of the primary variables endangering betel vine production in Bangladesh. Consequently, with the ultimate objective of finding efficient preventive and control strategies for this infamous phytopathogen, the current study was undertaken for comprehensive population structure analysis, exploration of physiological features and incidence patterns of pathogenic
S. rolfsii
isolates. We discovered 22
S. rolfsii
isolates from nine northern districts of Bangladesh
.
Mohanpur (51.90%), Bagmara (54.09%), and Durgapur (49.45%) upazilas in the Rajshahi district had the more severe occurrences of foot rot disease, while Chapainawabganj (18.89%) had the least number of cases. The isolates differed substantially in terms of morphology and growth rate. By employing the UPGMA algorithm to analyze the combined morphological data from 22
S. rolfsii
isolates, these isolates were divided into six different groups with a 62% similarity level. Somatic incompatibility was also found in some isolates. The RAPD-4 primer confirmed 100% polymorphism among these isolates, and these genetic variations were further validated by molecular analysis. The results of the morphological and molecular analysis revealed that there was significant variation among the
S. rolfsii
isolates. Finally, a comprehensive characterization of
S. rolfsii
would allow for a suitable management strategy for betel vine’s deadly foot rot disease.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>38298554</pmid><doi>10.1007/s13205-023-03890-8</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0003-1632-8783</orcidid></addata></record> |
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| source | SpringerLink Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central |
| subjects | Agriculture Algorithms Athelia rolfsii Bangladesh betel Bioinformatics Biomaterials Biotechnology Cancer Research Chemistry Chemistry and Materials Science Foot rot fungi Genetic diversity Incompatibility Morphology Original Original Article plant pathogens Polymorphism Population structure Sclerotium rolfsii somatic incompatibility Stem Cells Structural analysis vines |
| title | Characterization of Sclerotium rolfsii causing foot rot: a severe threat of betel vine cultivation in Bangladesh |
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