Evolution and divergence of the genetic lineage Desmodus rotundus/Artibeus lituratus of rabies virus in São Paulo State
The last record of a rabies case caused by the dog-specific rabies virus (RABV) lineage in dogs or cats in São Paulo State was in 1998. From 2002 to 2021, 57 cases of rabies in these animals were reported, and the vast majority (51) were genetically characterized as belonging to the Desmodus rotund...
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| Veröffentlicht in: | Archives of virology 2023-11, Vol.168 (11), p.266-266, Article 266 |
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| creator | de Souza, D. N. Oliveira, R. N. Asprino, P. F. Bettoni, F. Macedo, C. I. Achkar, S. M. Fahl, W. O. Brandão, P. E. Castilho, J. G. |
| description | The last record of a rabies case caused by the dog-specific rabies virus (RABV) lineage in dogs or cats in São Paulo State was in 1998. From 2002 to 2021, 57 cases of rabies in these animals were reported, and the vast majority (51) were genetically characterized as belonging to the
Desmodus rotundus/Artibeus lituratus
RABV lineage. However, it is not currently possible to infer which of these bats is the source of infection by genome sequencing of RABV isolates. The aims of this study were (a) to characterize the
Desmodus rotundus/Artibeus lituratus
lineage to determine the relationships between the RABV lineages and each reservoir, (b) to assess the phylogeny and common ancestors of the RABV lineages found in
D. rotundus
and
A. lituratus
, and (c) to further understand the epidemiology and control of rabies. In this study, we genetically analyzed 70 RABV isolates from São Paulo State that were received by the Virology Laboratory of the Pasteur Institute of São Paulo between 2006 and 2015. Of these isolates, 33 were associated with the hematophagous bat
D. rotundus
and 37 with the fruit bat
A. lituratus
. A genomic approach using phylogenetic analysis and nucleotide sequence comparisons demonstrated that these isolates belonged to the same genetic lineage of RABV. We also found that, in São Paulo State, the
D. rotundus/A. lituratus
lineage could be subdivided into at least four phylogenetic sublineages: two associated with
D. rotundus
and two with
A. lituratus
. These results are of importance for the epidemiological surveillance of rabies in São Paulo. |
| doi_str_mv | 10.1007/s00705-023-05864-w |
| format | Article |
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Desmodus rotundus/Artibeus lituratus
RABV lineage. However, it is not currently possible to infer which of these bats is the source of infection by genome sequencing of RABV isolates. The aims of this study were (a) to characterize the
Desmodus rotundus/Artibeus lituratus
lineage to determine the relationships between the RABV lineages and each reservoir, (b) to assess the phylogeny and common ancestors of the RABV lineages found in
D. rotundus
and
A. lituratus
, and (c) to further understand the epidemiology and control of rabies. In this study, we genetically analyzed 70 RABV isolates from São Paulo State that were received by the Virology Laboratory of the Pasteur Institute of São Paulo between 2006 and 2015. Of these isolates, 33 were associated with the hematophagous bat
D. rotundus
and 37 with the fruit bat
A. lituratus
. A genomic approach using phylogenetic analysis and nucleotide sequence comparisons demonstrated that these isolates belonged to the same genetic lineage of RABV. We also found that, in São Paulo State, the
D. rotundus/A. lituratus
lineage could be subdivided into at least four phylogenetic sublineages: two associated with
D. rotundus
and two with
A. lituratus
. These results are of importance for the epidemiological surveillance of rabies in São Paulo.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-023-05864-w</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Artibeus lituratus ; Bats ; Biomedical and Life Sciences ; Biomedicine ; Brazil ; Desmodus ; Desmodus rotundus ; Epidemiology ; genome ; genomics ; Infectious Diseases ; Lyssavirus ; Medical Microbiology ; monitoring ; Nucleotide sequence ; nucleotide sequences ; Original Article ; Phylogenetics ; Phylogeny ; Rabies ; Rabies lyssavirus ; Virology</subject><ispartof>Archives of virology, 2023-11, Vol.168 (11), p.266-266, Article 266</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c336t-cc7025abe1ab73175cf52704e17587f827170a9781c265eeefef82e9e2b0e3903</cites><orcidid>0000-0002-6316-8308</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-023-05864-w$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-023-05864-w$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,778,782,27911,27912,41475,42544,51306</link.rule.ids></links><search><creatorcontrib>de Souza, D. N.</creatorcontrib><creatorcontrib>Oliveira, R. N.</creatorcontrib><creatorcontrib>Asprino, P. F.</creatorcontrib><creatorcontrib>Bettoni, F.</creatorcontrib><creatorcontrib>Macedo, C. I.</creatorcontrib><creatorcontrib>Achkar, S. M.</creatorcontrib><creatorcontrib>Fahl, W. O.</creatorcontrib><creatorcontrib>Brandão, P. E.</creatorcontrib><creatorcontrib>Castilho, J. G.</creatorcontrib><title>Evolution and divergence of the genetic lineage Desmodus rotundus/Artibeus lituratus of rabies virus in São Paulo State</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><description>The last record of a rabies case caused by the dog-specific rabies virus (RABV) lineage in dogs or cats in São Paulo State was in 1998. From 2002 to 2021, 57 cases of rabies in these animals were reported, and the vast majority (51) were genetically characterized as belonging to the
Desmodus rotundus/Artibeus lituratus
RABV lineage. However, it is not currently possible to infer which of these bats is the source of infection by genome sequencing of RABV isolates. The aims of this study were (a) to characterize the
Desmodus rotundus/Artibeus lituratus
lineage to determine the relationships between the RABV lineages and each reservoir, (b) to assess the phylogeny and common ancestors of the RABV lineages found in
D. rotundus
and
A. lituratus
, and (c) to further understand the epidemiology and control of rabies. In this study, we genetically analyzed 70 RABV isolates from São Paulo State that were received by the Virology Laboratory of the Pasteur Institute of São Paulo between 2006 and 2015. Of these isolates, 33 were associated with the hematophagous bat
D. rotundus
and 37 with the fruit bat
A. lituratus
. A genomic approach using phylogenetic analysis and nucleotide sequence comparisons demonstrated that these isolates belonged to the same genetic lineage of RABV. We also found that, in São Paulo State, the
D. rotundus/A. lituratus
lineage could be subdivided into at least four phylogenetic sublineages: two associated with
D. rotundus
and two with
A. lituratus
. These results are of importance for the epidemiological surveillance of rabies in São Paulo.</description><subject>Artibeus lituratus</subject><subject>Bats</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Brazil</subject><subject>Desmodus</subject><subject>Desmodus rotundus</subject><subject>Epidemiology</subject><subject>genome</subject><subject>genomics</subject><subject>Infectious Diseases</subject><subject>Lyssavirus</subject><subject>Medical Microbiology</subject><subject>monitoring</subject><subject>Nucleotide sequence</subject><subject>nucleotide sequences</subject><subject>Original Article</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Rabies</subject><subject>Rabies lyssavirus</subject><subject>Virology</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkc9KHTEUxkNR6FX7Al0F3HQz9SSZTDJL8W9BaEFdh0zumdvI3ESTzFWfp4_SFzN6C4Uu7Cb5zsfvO3D4CPnM4CsDUEe5PiAb4KIBqbu2efxAFqwVvNGq1ztkAQLaRnegP5K9nO8AqiHkgjydbeI0Fx8DtWFJl36DaYXBIY0jLT-R1gGLd3TyAe0K6SnmdVzOmaZY5lDF0XEqfsDqTL7MyZaqajbZwWOmG5_q7AO9_v0r0h92niK9LrbgAdkd7ZTx059_n9yen92cXDZX3y--nRxfNU6IrjTOKeDSDsjsoART0o2SK2ixSq1GzRVTYHulmeOdRMQRq4k98gFQ9CD2yZft3vsUH2bMxax9djhNNmCcsxFMCtkB0_K_KNeq5bLXb-jhP-hdnFOoh7xSAnSvW1EpvqVcijknHM198mubng0D89qb2fZmam_mrTfzWENiG8oVDitMf1e_k3oBuy6cyA</recordid><startdate>20231101</startdate><enddate>20231101</enddate><creator>de Souza, D. N.</creator><creator>Oliveira, R. N.</creator><creator>Asprino, P. F.</creator><creator>Bettoni, F.</creator><creator>Macedo, C. I.</creator><creator>Achkar, S. M.</creator><creator>Fahl, W. O.</creator><creator>Brandão, P. E.</creator><creator>Castilho, J. 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N. ; Oliveira, R. N. ; Asprino, P. F. ; Bettoni, F. ; Macedo, C. I. ; Achkar, S. M. ; Fahl, W. O. ; Brandão, P. E. ; Castilho, J. 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N.</au><au>Oliveira, R. N.</au><au>Asprino, P. F.</au><au>Bettoni, F.</au><au>Macedo, C. I.</au><au>Achkar, S. M.</au><au>Fahl, W. O.</au><au>Brandão, P. E.</au><au>Castilho, J. G.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evolution and divergence of the genetic lineage Desmodus rotundus/Artibeus lituratus of rabies virus in São Paulo State</atitle><jtitle>Archives of virology</jtitle><stitle>Arch Virol</stitle><date>2023-11-01</date><risdate>2023</risdate><volume>168</volume><issue>11</issue><spage>266</spage><epage>266</epage><pages>266-266</pages><artnum>266</artnum><issn>0304-8608</issn><eissn>1432-8798</eissn><abstract>The last record of a rabies case caused by the dog-specific rabies virus (RABV) lineage in dogs or cats in São Paulo State was in 1998. From 2002 to 2021, 57 cases of rabies in these animals were reported, and the vast majority (51) were genetically characterized as belonging to the
Desmodus rotundus/Artibeus lituratus
RABV lineage. However, it is not currently possible to infer which of these bats is the source of infection by genome sequencing of RABV isolates. The aims of this study were (a) to characterize the
Desmodus rotundus/Artibeus lituratus
lineage to determine the relationships between the RABV lineages and each reservoir, (b) to assess the phylogeny and common ancestors of the RABV lineages found in
D. rotundus
and
A. lituratus
, and (c) to further understand the epidemiology and control of rabies. In this study, we genetically analyzed 70 RABV isolates from São Paulo State that were received by the Virology Laboratory of the Pasteur Institute of São Paulo between 2006 and 2015. Of these isolates, 33 were associated with the hematophagous bat
D. rotundus
and 37 with the fruit bat
A. lituratus
. A genomic approach using phylogenetic analysis and nucleotide sequence comparisons demonstrated that these isolates belonged to the same genetic lineage of RABV. We also found that, in São Paulo State, the
D. rotundus/A. lituratus
lineage could be subdivided into at least four phylogenetic sublineages: two associated with
D. rotundus
and two with
A. lituratus
. These results are of importance for the epidemiological surveillance of rabies in São Paulo.</abstract><cop>Vienna</cop><pub>Springer Vienna</pub><doi>10.1007/s00705-023-05864-w</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-6316-8308</orcidid></addata></record> |
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| ispartof | Archives of virology, 2023-11, Vol.168 (11), p.266-266, Article 266 |
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| language | eng |
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| source | Springer Nature - Complete Springer Journals |
| subjects | Artibeus lituratus Bats Biomedical and Life Sciences Biomedicine Brazil Desmodus Desmodus rotundus Epidemiology genome genomics Infectious Diseases Lyssavirus Medical Microbiology monitoring Nucleotide sequence nucleotide sequences Original Article Phylogenetics Phylogeny Rabies Rabies lyssavirus Virology |
| title | Evolution and divergence of the genetic lineage Desmodus rotundus/Artibeus lituratus of rabies virus in São Paulo State |
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