Anti-Liver Fibrosis Role of miRNA-96-5p via Targeting FN1 and Inhibiting ECM-Receptor Interaction Pathway
The aberrant expression of mRNAs participates in the pathogenesis of hepatic fibrosis. However, the precise mechanisms regulated by microRNAs (miRNAs) remain unclear. This study aims to investigate the functions about differentially expressed mRNAs (DEMs) in liver fibrosis and their regulatory mecha...
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description | The aberrant expression of mRNAs participates in the pathogenesis of hepatic fibrosis. However, the precise mechanisms regulated by microRNAs (miRNAs) remain unclear. This study aims to investigate the functions about differentially expressed mRNAs (DEMs) in liver fibrosis and their regulatory mechanisms. The DEMs datasets about hepatic stellate cells (HSCs) obtained from hepatic fibrosis mice versus HSCs obtained from normal mice were downloaded from the GEO database (GSE120281). According to Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of the GSE120281 datasets, ECM-receptor interaction was the most significant enrichment pathway that was correlated with hepatic fibrosis, and the fibronectin 1 (FN1) gene was upregulated most significantly in the signaling pathway. Downregulation of the expression of the FN1 gene by transfecting with FN1-siRNA alleviated the activity of HSCs. Four different bioinformatics web-based tools were used to predict that microRNA-96-5p (miR-96-5p) would directly target FN1, and a luciferase assay further confirmed this. Moreover, miR-96-5p was declined in activated HSCs and FN1, whereas laminin γ1 (LAMC1), collagen 1α1 (COL1A1) in the ECM-receptor interaction pathway, and the fibrosis marker α-smooth muscle actin (α-SMA) could be reduced by upregulation of the miRNA. Additionally, miR-96-5p expression was low in CCl4-induced liver fibrosis mice. Increased miR-96-5p expression alleviated liver fibrosis, improved liver function, and inhibited the expression of α-SMA, FN1, COL1A1, and LAMC1. In conclusion, this study indicated that upregulation of miR-96-5p could reduce HSC activation and relieve hepatic fibrosis by restraining the FN1/ECM-receptor interaction pathway. |
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However, the precise mechanisms regulated by microRNAs (miRNAs) remain unclear. This study aims to investigate the functions about differentially expressed mRNAs (DEMs) in liver fibrosis and their regulatory mechanisms. The DEMs datasets about hepatic stellate cells (HSCs) obtained from hepatic fibrosis mice versus HSCs obtained from normal mice were downloaded from the GEO database (GSE120281). According to Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of the GSE120281 datasets, ECM-receptor interaction was the most significant enrichment pathway that was correlated with hepatic fibrosis, and the fibronectin 1 (FN1) gene was upregulated most significantly in the signaling pathway. Downregulation of the expression of the FN1 gene by transfecting with FN1-siRNA alleviated the activity of HSCs. Four different bioinformatics web-based tools were used to predict that microRNA-96-5p (miR-96-5p) would directly target FN1, and a luciferase assay further confirmed this. Moreover, miR-96-5p was declined in activated HSCs and FN1, whereas laminin γ1 (LAMC1), collagen 1α1 (COL1A1) in the ECM-receptor interaction pathway, and the fibrosis marker α-smooth muscle actin (α-SMA) could be reduced by upregulation of the miRNA. Additionally, miR-96-5p expression was low in CCl4-induced liver fibrosis mice. Increased miR-96-5p expression alleviated liver fibrosis, improved liver function, and inhibited the expression of α-SMA, FN1, COL1A1, and LAMC1. In conclusion, this study indicated that upregulation of miR-96-5p could reduce HSC activation and relieve hepatic fibrosis by restraining the FN1/ECM-receptor interaction pathway.</description><identifier>ISSN: 0273-2289</identifier><identifier>EISSN: 1559-0291</identifier><identifier>DOI: 10.1007/s12010-023-04385-1</identifier><identifier>PMID: 36943602</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Actin ; Biochemistry ; Bioinformatics ; Biotechnology ; Carbon tetrachloride ; Chemistry ; Chemistry and Materials Science ; collagen ; Collagen (type I) ; data collection ; Datasets ; Down-regulation ; Encyclopedias ; Extracellular matrix ; Fibronectin ; fibronectins ; Fibrosis ; Gene expression ; gene ontology ; genes ; Genomes ; Internet ; Laminin ; Liver ; liver cirrhosis ; liver function ; luciferase ; microRNA ; MicroRNAs ; miRNA ; muscles ; Original Article ; Pathogenesis ; Receptors ; Regulatory mechanisms (biology) ; Ribonucleic acid ; RNA ; Signal transduction ; siRNA ; Smooth muscle ; Stellate cells ; Up-regulation</subject><ispartof>Applied biochemistry and biotechnology, 2023-11, Vol.195 (11), p.6840-6855</ispartof><rights>The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2023. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.</rights><rights>2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c359t-e7cc194180db37e161dc368ebb0c3cde9b065da0b8b01903623854011b8996f33</cites><orcidid>0000-0002-2706-6232</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12010-023-04385-1$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s12010-023-04385-1$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36943602$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhang, Yong</creatorcontrib><creatorcontrib>Gu, Tengfei</creatorcontrib><creatorcontrib>Xu, Sanrong</creatorcontrib><creatorcontrib>Wang, Jingzhi</creatorcontrib><creatorcontrib>Zhu, Xinguo</creatorcontrib><title>Anti-Liver Fibrosis Role of miRNA-96-5p via Targeting FN1 and Inhibiting ECM-Receptor Interaction Pathway</title><title>Applied biochemistry and biotechnology</title><addtitle>Appl Biochem Biotechnol</addtitle><addtitle>Appl Biochem Biotechnol</addtitle><description>The aberrant expression of mRNAs participates in the pathogenesis of hepatic fibrosis. However, the precise mechanisms regulated by microRNAs (miRNAs) remain unclear. This study aims to investigate the functions about differentially expressed mRNAs (DEMs) in liver fibrosis and their regulatory mechanisms. The DEMs datasets about hepatic stellate cells (HSCs) obtained from hepatic fibrosis mice versus HSCs obtained from normal mice were downloaded from the GEO database (GSE120281). According to Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of the GSE120281 datasets, ECM-receptor interaction was the most significant enrichment pathway that was correlated with hepatic fibrosis, and the fibronectin 1 (FN1) gene was upregulated most significantly in the signaling pathway. Downregulation of the expression of the FN1 gene by transfecting with FN1-siRNA alleviated the activity of HSCs. Four different bioinformatics web-based tools were used to predict that microRNA-96-5p (miR-96-5p) would directly target FN1, and a luciferase assay further confirmed this. Moreover, miR-96-5p was declined in activated HSCs and FN1, whereas laminin γ1 (LAMC1), collagen 1α1 (COL1A1) in the ECM-receptor interaction pathway, and the fibrosis marker α-smooth muscle actin (α-SMA) could be reduced by upregulation of the miRNA. Additionally, miR-96-5p expression was low in CCl4-induced liver fibrosis mice. Increased miR-96-5p expression alleviated liver fibrosis, improved liver function, and inhibited the expression of α-SMA, FN1, COL1A1, and LAMC1. In conclusion, this study indicated that upregulation of miR-96-5p could reduce HSC activation and relieve hepatic fibrosis by restraining the FN1/ECM-receptor interaction pathway.</description><subject>Actin</subject><subject>Biochemistry</subject><subject>Bioinformatics</subject><subject>Biotechnology</subject><subject>Carbon tetrachloride</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>collagen</subject><subject>Collagen (type I)</subject><subject>data collection</subject><subject>Datasets</subject><subject>Down-regulation</subject><subject>Encyclopedias</subject><subject>Extracellular matrix</subject><subject>Fibronectin</subject><subject>fibronectins</subject><subject>Fibrosis</subject><subject>Gene expression</subject><subject>gene ontology</subject><subject>genes</subject><subject>Genomes</subject><subject>Internet</subject><subject>Laminin</subject><subject>Liver</subject><subject>liver cirrhosis</subject><subject>liver function</subject><subject>luciferase</subject><subject>microRNA</subject><subject>MicroRNAs</subject><subject>miRNA</subject><subject>muscles</subject><subject>Original Article</subject><subject>Pathogenesis</subject><subject>Receptors</subject><subject>Regulatory mechanisms (biology)</subject><subject>Ribonucleic acid</subject><subject>RNA</subject><subject>Signal transduction</subject><subject>siRNA</subject><subject>Smooth muscle</subject><subject>Stellate 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Fibrosis Role of miRNA-96-5p via Targeting FN1 and Inhibiting ECM-Receptor Interaction Pathway</title><author>Zhang, Yong ; Gu, Tengfei ; Xu, Sanrong ; Wang, Jingzhi ; Zhu, Xinguo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c359t-e7cc194180db37e161dc368ebb0c3cde9b065da0b8b01903623854011b8996f33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Actin</topic><topic>Biochemistry</topic><topic>Bioinformatics</topic><topic>Biotechnology</topic><topic>Carbon tetrachloride</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>collagen</topic><topic>Collagen (type I)</topic><topic>data collection</topic><topic>Datasets</topic><topic>Down-regulation</topic><topic>Encyclopedias</topic><topic>Extracellular matrix</topic><topic>Fibronectin</topic><topic>fibronectins</topic><topic>Fibrosis</topic><topic>Gene expression</topic><topic>gene 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ECM-Receptor Interaction Pathway</atitle><jtitle>Applied biochemistry and biotechnology</jtitle><stitle>Appl Biochem Biotechnol</stitle><addtitle>Appl Biochem Biotechnol</addtitle><date>2023-11-01</date><risdate>2023</risdate><volume>195</volume><issue>11</issue><spage>6840</spage><epage>6855</epage><pages>6840-6855</pages><issn>0273-2289</issn><eissn>1559-0291</eissn><abstract>The aberrant expression of mRNAs participates in the pathogenesis of hepatic fibrosis. However, the precise mechanisms regulated by microRNAs (miRNAs) remain unclear. This study aims to investigate the functions about differentially expressed mRNAs (DEMs) in liver fibrosis and their regulatory mechanisms. The DEMs datasets about hepatic stellate cells (HSCs) obtained from hepatic fibrosis mice versus HSCs obtained from normal mice were downloaded from the GEO database (GSE120281). According to Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses of the GSE120281 datasets, ECM-receptor interaction was the most significant enrichment pathway that was correlated with hepatic fibrosis, and the fibronectin 1 (FN1) gene was upregulated most significantly in the signaling pathway. Downregulation of the expression of the FN1 gene by transfecting with FN1-siRNA alleviated the activity of HSCs. Four different bioinformatics web-based tools were used to predict that microRNA-96-5p (miR-96-5p) would directly target FN1, and a luciferase assay further confirmed this. Moreover, miR-96-5p was declined in activated HSCs and FN1, whereas laminin γ1 (LAMC1), collagen 1α1 (COL1A1) in the ECM-receptor interaction pathway, and the fibrosis marker α-smooth muscle actin (α-SMA) could be reduced by upregulation of the miRNA. Additionally, miR-96-5p expression was low in CCl4-induced liver fibrosis mice. Increased miR-96-5p expression alleviated liver fibrosis, improved liver function, and inhibited the expression of α-SMA, FN1, COL1A1, and LAMC1. In conclusion, this study indicated that upregulation of miR-96-5p could reduce HSC activation and relieve hepatic fibrosis by restraining the FN1/ECM-receptor interaction pathway.</abstract><cop>New York</cop><pub>Springer US</pub><pmid>36943602</pmid><doi>10.1007/s12010-023-04385-1</doi><tpages>16</tpages><orcidid>https://orcid.org/0000-0002-2706-6232</orcidid></addata></record> |
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subjects | Actin Biochemistry Bioinformatics Biotechnology Carbon tetrachloride Chemistry Chemistry and Materials Science collagen Collagen (type I) data collection Datasets Down-regulation Encyclopedias Extracellular matrix Fibronectin fibronectins Fibrosis Gene expression gene ontology genes Genomes Internet Laminin Liver liver cirrhosis liver function luciferase microRNA MicroRNAs miRNA muscles Original Article Pathogenesis Receptors Regulatory mechanisms (biology) Ribonucleic acid RNA Signal transduction siRNA Smooth muscle Stellate cells Up-regulation |
title | Anti-Liver Fibrosis Role of miRNA-96-5p via Targeting FN1 and Inhibiting ECM-Receptor Interaction Pathway |
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