Sequencing and biological characterization of historical cynosurus mottle virus isolates from Germany
We report sequencing of four historical cynosurus mottle virus (CnMoV) isolates, originating from different hosts and locations. The CnMoV genome, ranging from 4417 to 4419 nt, encodes five ORFs. It shares 48.1% nucleotide sequence identity with cocksfoot mottle virus and 69.8% with the recently dis...
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| Veröffentlicht in: | Archives of virology 2023-10, Vol.168 (10), p.265-265, Article 265 |
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| creator | Frei, Martin Sarmiento, Cecilia Kärblane, Kairi Niehl, Annette Sõmera, Merike |
| description | We report sequencing of four historical cynosurus mottle virus (CnMoV) isolates, originating from different hosts and locations. The CnMoV genome, ranging from 4417 to 4419 nt, encodes five ORFs. It shares 48.1% nucleotide sequence identity with cocksfoot mottle virus and 69.8% with the recently discovered Poaceae Liege sobemovirus. Phylogenetic analysis supports classification within the genus
Sobemovirus
. Sequenced CnMoV isolates exhibit 96.4–99.9% identity. Nucleotide substitutions leading to amino acid changes showed no host associations. However, amino acid changes in the coat protein appear to be linked to differences in serological properties. Aphid transmission tests confirmed non-transmissibility, consistent with earlier observations for the English isolate. |
| doi_str_mv | 10.1007/s00705-023-05893-5 |
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Sobemovirus
. Sequenced CnMoV isolates exhibit 96.4–99.9% identity. Nucleotide substitutions leading to amino acid changes showed no host associations. However, amino acid changes in the coat protein appear to be linked to differences in serological properties. Aphid transmission tests confirmed non-transmissibility, consistent with earlier observations for the English isolate.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-023-05893-5</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Amino acid sequence ; amino acids ; Aphidoidea ; Belgium ; Biomedical and Life Sciences ; Biomedicine ; Brief Report ; Coat protein ; coat proteins ; Cocksfoot mottle virus ; Cynosurus ; Experiments ; Flowers & plants ; genome ; Genomes ; Germany ; Infections ; Infectious Diseases ; Insects ; Leaves ; Medical Microbiology ; Nucleotide sequence ; nucleotide sequences ; Phylogeny ; Plant viruses ; sequence analysis ; Serology ; Viral infections ; Virology ; Viruses</subject><ispartof>Archives of virology, 2023-10, Vol.168 (10), p.265-265, Article 265</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature 2023</rights><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature 2023.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c385t-5f6b0d473822c8db9d1407e5bf410e597d1e5cf3ee57641d344ebae1829c20173</citedby><cites>FETCH-LOGICAL-c385t-5f6b0d473822c8db9d1407e5bf410e597d1e5cf3ee57641d344ebae1829c20173</cites><orcidid>0000-0001-9316-0481</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-023-05893-5$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-023-05893-5$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,778,782,27907,27908,41471,42540,51302</link.rule.ids></links><search><creatorcontrib>Frei, Martin</creatorcontrib><creatorcontrib>Sarmiento, Cecilia</creatorcontrib><creatorcontrib>Kärblane, Kairi</creatorcontrib><creatorcontrib>Niehl, Annette</creatorcontrib><creatorcontrib>Sõmera, Merike</creatorcontrib><title>Sequencing and biological characterization of historical cynosurus mottle virus isolates from Germany</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><description>We report sequencing of four historical cynosurus mottle virus (CnMoV) isolates, originating from different hosts and locations. The CnMoV genome, ranging from 4417 to 4419 nt, encodes five ORFs. It shares 48.1% nucleotide sequence identity with cocksfoot mottle virus and 69.8% with the recently discovered Poaceae Liege sobemovirus. Phylogenetic analysis supports classification within the genus
Sobemovirus
. Sequenced CnMoV isolates exhibit 96.4–99.9% identity. Nucleotide substitutions leading to amino acid changes showed no host associations. However, amino acid changes in the coat protein appear to be linked to differences in serological properties. 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The CnMoV genome, ranging from 4417 to 4419 nt, encodes five ORFs. It shares 48.1% nucleotide sequence identity with cocksfoot mottle virus and 69.8% with the recently discovered Poaceae Liege sobemovirus. Phylogenetic analysis supports classification within the genus
Sobemovirus
. Sequenced CnMoV isolates exhibit 96.4–99.9% identity. Nucleotide substitutions leading to amino acid changes showed no host associations. However, amino acid changes in the coat protein appear to be linked to differences in serological properties. Aphid transmission tests confirmed non-transmissibility, consistent with earlier observations for the English isolate.</abstract><cop>Vienna</cop><pub>Springer Vienna</pub><doi>10.1007/s00705-023-05893-5</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0001-9316-0481</orcidid></addata></record> |
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| subjects | Amino acid sequence amino acids Aphidoidea Belgium Biomedical and Life Sciences Biomedicine Brief Report Coat protein coat proteins Cocksfoot mottle virus Cynosurus Experiments Flowers & plants genome Genomes Germany Infections Infectious Diseases Insects Leaves Medical Microbiology Nucleotide sequence nucleotide sequences Phylogeny Plant viruses sequence analysis Serology Viral infections Virology Viruses |
| title | Sequencing and biological characterization of historical cynosurus mottle virus isolates from Germany |
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